mRNA_E_fasciculatus_S2_contig8251.16401.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8251.16401.1 vs.
Match: Hydrocephalus-inducing (protein, Hydin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJY6_ECTSI) HSP 1 Score: 429 bits (1103), Expect = 7.540e-135 Identity = 236/292 (80.82%), Postives = 240/292 (82.19%), Query Frame = 1
Query: 1 ERSRLHAEMARMQSLEEEALLSGTVAGQQSSGALGGGRGXXXXXXDAEGPQTDGDETDDYSDK------------------------------------------AAQAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYSSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKDSVTVTMEFESDILGEFAELFRFVLRGNEEPVPCQFKGHVVS 750
ERSRLHAEM RMQSLEEEALLSGTVAGQQSSGA GGG XXXXXX PQTDGDETDDYSD+ AAQAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEY SHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPF+RKFRFGPMKGTLDVKDSVTVTMEFESDILGEF+ELFRFVLRGNEEPVPCQFKGHV+
Sbjct: 391 ERSRLHAEMTRMQSLEEEALLSGTVAGQQSSGARGGGXXXXXXXXXXXXPQTDGDETDDYSDQEEWATATASTVAALGASHXXXXXXXXXXVTASSSVGLPPSFQAAQAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYGSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPFSRKFRFGPMKGTLDVKDSVTVTMEFESDILGEFSELFRFVLRGNEEPVPCQFKGHVIG 682
BLAST of mRNA_E_fasciculatus_S2_contig8251.16401.1 vs.
Match: MSP (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Z3_9PHAE) HSP 1 Score: 344 bits (883), Expect = 2.770e-105 Identity = 209/339 (61.65%), Postives = 212/339 (62.54%), Query Frame = 1
Query: 1 ERSRLHAEMARMQSLEEEALLSGTVAGQQSSGALGGGRGXXXXXXDAEGPQTDGDETDDYSDK-----------------------------------------------------------------------------------------AAQAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYSSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKDSVTVTMEFESDILGEFAELFRFVLRGNEEPVPCQFKGHVVS 750
ERSRLHAEMARMQSLEEEALLSGTVAGQQS XXXXXX GPQTDGDETDDYSD+ AAQAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEY SHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVH+VTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKD RGNEEPVPCQFKGHV+
Sbjct: 284 ERSRLHAEMARMQSLEEEALLSGTVAGQQSGXXXXXXXXXXXXXXXXXGPQTDGDETDDYSDQPSEVLKEDFRRCCVKLETPRSNASTLVGAFDDSSNISLKLELTDHRQEEWATATASTVAXXXXXXXXXXXXXXXXXXASSSVGLPPSVQAAQAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYGSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHQVTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKD------------------------RGNEEPVPCQFKGHVIG 598
BLAST of mRNA_E_fasciculatus_S2_contig8251.16401.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SNA2_9ARCH) HSP 1 Score: 207 bits (526), Expect = 2.290e-57 Identity = 100/185 (54.05%), Postives = 127/185 (68.65%), Query Frame = 1
Query: 196 QAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYSSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKDSVTVTMEFESDILGEFAELFRFVLRGNEEPVPCQFKGHVVS 750
+A + RKYR+LR+AL D MLF D+IF+I P EGE+WA +E EVT+ FRP T Y+ AFLD GR +RLPL+L G GIGP LSFDVLD+GDVF+N +E+++ N+GDI A WT + T F KF+F P G L S + + FESDILGEF+E FRF L+GNE + CQ KGHV+
Sbjct: 289 EATIIRKYRNLRKALELDKMLFVDDIFDISPSEGEVWAHAETEVTIVFRPDTAALYNCLAFLDVSGRHDRLPLQLTGQGIGPHAALSFDVLDIGDVFVNDVSTYELSIKNKGDIPAQWTFMSSLTKFGNKFQFSPTDGYLLPNQSQNIAIRFESDILGEFSEFFRFALQGNENMLVCQIKGHVLG 473
BLAST of mRNA_E_fasciculatus_S2_contig8251.16401.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y448_AURAN) HSP 1 Score: 195 bits (496), Expect = 2.480e-53 Identity = 120/255 (47.06%), Postives = 157/255 (61.57%), Query Frame = 1
Query: 1 ERSRLHAEMARMQSLEEEALLSGTVAGQQSSGALGGGRGXXXXXXDAEGPQTDGDETDDYSD-----KAAQAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYSSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKDSVTVTMEFESDILGEFAELFRFVLRGNEEPVPCQFKGHVVS 750
ERSRLH+++ RMQ L EEA L T+ + + G G + ++DGD + D + +AA++AL KYRHLR+AL KD M+FADE FEI+PL GE+ A SEIEV+V FRP T +Y+ A+LD +GREERLP+ L G GIGPK LS+DVLDMGDVFI+S + + + + N+GDI A+W L P T F+F P G L V S +T+ F LGEF EL L G+ FKGHV+
Sbjct: 301 ERSRLHSDLERMQQL-EEAHLEETLRQDELAALAHHGHGFSNQP---QSDESDGDLSGDEGNVPGATRAARSALTTKYRHLRQALEKDDMVFADENFEIKPLSGEVRALSEIEVSVTFRPDTAADYACTAYLDVMGREERLPIWLTGLGIGPKGALSYDVLDMGDVFISSPYEYSLGITNKGDIPAEWKLFPPPTT---TFQFSPTSGVLAVGGSEELTVHFMGTTLGEFCELVDVALDGSNXXXXXXFKGHVIG 548
BLAST of mRNA_E_fasciculatus_S2_contig8251.16401.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKS6_9STRA) HSP 1 Score: 185 bits (469), Expect = 1.030e-49 Identity = 113/255 (44.31%), Postives = 156/255 (61.18%), Query Frame = 1
Query: 1 ERSRLHAEMARMQSLEEEALLSGTVAGQQSSGALGGGRGXXXXXXDAEGPQTDGDETDDYSD-----KAAQAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYSSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKDSVTVTMEFESDILGEFAELFRFVLRGNEEPVPCQFKGHVVS 750
ER RL +++ RMQ L EEA L ++ + S D EG +DGD + D +AA++AL KYRHLR+AL KD M+F+DE FEI+PL GE+ A SE+++ V FRP T +Y+ A+LD +GREERLP+ L G GIGPK LS+DVLD+GDVF+ + + +++ N+GDI A W L P++ F P +GTL V + +++EF LGEF EL L G+ E + CQFKGHV+
Sbjct: 297 ERERLRSDLERMQQL-EEAHLEEALSKRPPS--------------DDEG--SDGDLSGDEGHVSAGARAARSALATKYRHLRQALEKDDMVFSDETFEIKPLSGEVRALSEVDIHVMFRPDTAADYACTAYLDVVGREERLPVWLTGIGIGPKGALSYDVLDLGDVFVGHPYSYTLSIDNKGDIPAAWRLNPPESD---AFVVEPTQGTLAVSGTQQLSVEFLGSTLGEFCELVDVELDGSNERLTCQFKGHVIG 531
BLAST of mRNA_E_fasciculatus_S2_contig8251.16401.1 vs.
Match: Uncharacterized (protein n=11 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EW24_VITBC) HSP 1 Score: 184 bits (468), Expect = 1.410e-49 Identity = 92/199 (46.23%), Postives = 130/199 (65.33%), Query Frame = 1
Query: 154 TDGDETDDYSDKAAQAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYSSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKDSVTVTMEFESDILGEFAELFRFVLRGNEEPVPCQFKGHVVS 750
+D D+ ++K +AAL RKYR++ R L D M F DEIF + PL G IWA+S VTV F P+ Y A+ D +G ER+PL L G GIGPK S+D LD+GD+FI S+H +EV L++RGDIA +++LQ +T F KFRF P G L+V +SV++T++F D+LG+F E F ++L G+ P+ F+G V+
Sbjct: 428 SDTDDPQTKNEKKVEAALDRKYRNIERVLKDDPMYFYDEIFNVEPLMGTIWAQSSCTVTVSFSPKAALCYQCLAYCDIVGCGERVPLLLKGQGIGPKATFSYDELDVGDLFIGSKHKYEVDLISRGDIAVNYSLQPLETAFGPKFRFTPDSGRLEVGESVSITVDFVPDLLGDFCETFTWILEGSAAPITITFRGTCVA 626
BLAST of mRNA_E_fasciculatus_S2_contig8251.16401.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJI6_9STRA) HSP 1 Score: 169 bits (429), Expect = 2.130e-44 Identity = 91/204 (44.61%), Postives = 124/204 (60.78%), Query Frame = 1
Query: 190 AAQAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYSSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQT-----PFARKFRFGPMKGTLDVKDSVTVTMEFESDILGEFAELFRFVLRGNEEPVP------------CQFKGHVVS 750
AA AA++RKYRHLRRA+ +DAMLFAD+ FE+RPL GE+WA +E EVTV FRP +YS+ A+L+ +GREER P+ L G+GIGP++ LS+ LDMGD+F+ +++T++N+GDI ADW L+ ++ A+ G M G +D D VTV + F LG F E LR C F+G VV
Sbjct: 408 AALAAVRRKYRHLRRAVDEDAMLFADDAFELRPLRGEVWANAETEVTVLFRPGVAMDYSACAYLEVVGREERAPIWLSGAGIGPRIELSYAQLDMGDIFLGLSRAYDLTIVNKGDIPADWALRPARSGSSGGETAKTADGGEMDGEMD--DDVTVRVRFMGAALGAFCETVAVALRSGXXXXXXXXXXXXXXXXXCAFRGRVVG 609
BLAST of mRNA_E_fasciculatus_S2_contig8251.16401.1 vs.
Match: Hydrocephalus-inducing (protein-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GSE6_9STRA) HSP 1 Score: 164 bits (415), Expect = 1.750e-42 Identity = 82/182 (45.05%), Postives = 113/182 (62.09%), Query Frame = 1
Query: 205 LKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYSSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKDSVTVTMEFESDILGEFAELFRFVLRGNEEPVPCQFKGHVVS 750
LK+KYRHLRRA+ DAMLFADE F I PL G++W+ S EVT+ F P +Y+S A L GRE R+PL++ G GIGPK S ++D G VFI S H H + + NRGDI ++ L AP A F P GTL+V ++ + ++F S LG F+E+ F + G+ + + + KG+VV
Sbjct: 482 LKQKYRHLRRAVEDDAMLFADENFRIEPLTGQVWSHSAKEVTISFSPLIAADYASIACLAVTGRENRIPLKILGQGIGPKAAFSAAIVDFGTVFIGSEHTHSIEIENRGDIRCEYLLDAPSEDLASALTFSPSMGTLEVGETRKLQIDFCSGKLGAFSEIITFSMTGSNDKLRVRVKGNVVG 663
BLAST of mRNA_E_fasciculatus_S2_contig8251.16401.1 vs.
Match: hydrocephalus-inducing (protein homolog n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZYJ1_ACAPL) HSP 1 Score: 161 bits (408), Expect = 1.480e-41 Identity = 81/184 (44.02%), Postives = 109/184 (59.24%), Query Frame = 1
Query: 199 AALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYSSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKDSVTVTMEFESDILGEFAELFRFVLRGNEEPVPCQFKGHVVS 750
A L R + + R+ + D+ML+ D F I PLEG+IW S EV V F+P Y S A+ D GRE RLPLR+ G G+GPKVV SFD LDMG +F+ S H +EV L N+GDI A + L QT F +F+F P +G + + + F S +LG+F E F +RG E + FKG+V+
Sbjct: 377 AILTRTFHNRRKMVEGDSMLYTDSAFTIEPLEGDIWPNSSTEVNVIFKPEEARTYWSTAYCDVTGRETRLPLRMRGDGVGPKVVFSFDALDMGHIFVGSTHTYEVVLSNQGDIDATFNLLPNQTTFGPRFQFSPSEGIVTPGSHQAIKIAFSSPVLGDFDEDFHCSVRGLPEKLKLNFKGNVIG 560
BLAST of mRNA_E_fasciculatus_S2_contig8251.16401.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3JKP0_9SPIT) HSP 1 Score: 148 bits (374), Expect = 2.230e-40 Identity = 75/165 (45.45%), Postives = 105/165 (63.64%), Query Frame = 1
Query: 205 LKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYSSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKDSV--TVTMEFESDILGEFAELFRF 693
L RKY+ +R+A+ +D MLF DEIF I PL+G++W +EI V F+P+ YS AF + EERLPL L G GIGPK LS D+GD+F+N +H + + + N+GDI + L +TPF KF F +G L VK++ + + F+SDILGEF+E FR+
Sbjct: 84 LARKYQSIRKAVEEDLMLFQDEIFTIEPLQGKLWPNTEITCCVTFKPQGPLHYSCTAFCNITCSEERLPLNLTGQGIGPKAALSIKEWDIGDIFVNYKHTYSIAIENKGDITCYYKLIPYETPFGSKFFFSKTEGKLGVKENQREVIDVTFQSDILGEFSETFRW 248 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8251.16401.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8251.16401.1 >prot_E_fasciculatus_S2_contig8251.16401.1 ID=prot_E_fasciculatus_S2_contig8251.16401.1|Name=mRNA_E_fasciculatus_S2_contig8251.16401.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=242bp MARMQSLEEEALLSGTVAGQQSSGALGGGRGGTGGGEDAEGPQTDGDETDback to top mRNA from alignment at E_fasciculatus_S2_contig8251:4790..6435+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8251.16401.1 ID=mRNA_E_fasciculatus_S2_contig8251.16401.1|Name=mRNA_E_fasciculatus_S2_contig8251.16401.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1646bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8251:4790..6435+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8251:4790..6435+ >mRNA_E_fasciculatus_S2_contig8251.16401.1 ID=mRNA_E_fasciculatus_S2_contig8251.16401.1|Name=mRNA_E_fasciculatus_S2_contig8251.16401.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=726bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8251:4790..6435+ (Ectocarpus fasciculatus EfasUO2)back to top |