mRNA_E_fasciculatus_S2_contig8250.16399.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8250.16399.1 vs.
Match: Glycosyltransferase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLX6_ECTSI) HSP 1 Score: 641 bits (1654), Expect = 6.900e-230 Identity = 311/354 (87.85%), Postives = 329/354 (92.94%), Query Frame = 1
Query: 1 LEVGEE-PTRSPQSKDEKKGDDSTEPPXXXXXXXXXXXXSWKGGGGPFGLDGDWRDALQEEGGDGSEDGLRGEACMTHEKRKEVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDRTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSSHHANPKVVVNLTPTESDPVAPPLKSMHKAEGCGCLDLKREVLINHYLGSRGDYLERVHRYWSTYMAGDNDPVHRLNQRDVNDRVSDTITHWSCATREVLYRVDNGLDLQTGLPRST 1059
+E+GEE PT+SPQSKDEKK DDSTEPP SWKG GGPFG+DGDWR+ALQE+GGDG+E+GLRGEACMTHE RKEVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVD+TSEVLKPFV+AGIVRYIFDMIPRR AQMEPLNRCLRHYINRKK+D ENAPSWLLFHD DEYVYP DTS+TL+DAL KHESTCCA+VRRIQYGSGGH EMPRGLVMDSF+AHQNDSSHHANPKVVVNLTPTESDPVAPPLKSMHKAEGC CLDLK+EVLINHYLGSRGDYLERVHRYWSTYMAGDNDP HRL+QRDVNDRVSDTITHWSC+TREVLYRVDNGLDLQTGLP ST
Sbjct: 104 VELGEELPTQSPQSKDEKKSDDSTEPPE-----------SWKGRGGPFGIDGDWRNALQEDGGDGAENGLRGEACMTHENRKEVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDQTSEVLKPFVSAGIVRYIFDMIPRRNAQMEPLNRCLRHYINRKKDDPENAPSWLLFHDNDEYVYPRDTSMTLFDALNKHESTCCALVRRIQYGSGGHDEMPRGLVMDSFMAHQNDSSHHANPKVVVNLTPTESDPVAPPLKSMHKAEGCACLDLKQEVLINHYLGSRGDYLERVHRYWSTYMAGDNDPGHRLSQRDVNDRVSDTITHWSCSTREVLYRVDNGLDLQTGLPPST 446
BLAST of mRNA_E_fasciculatus_S2_contig8250.16399.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB75_9PHAE) HSP 1 Score: 355 bits (912), Expect = 2.390e-116 Identity = 179/340 (52.65%), Postives = 226/340 (66.47%), Query Frame = 1
Query: 118 WKGGGGPFGLDGDWRDALQEEGGD-----GSEDGLRGE-ACMTHEKRKEV-----------------AVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDRTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSSHHAN--PKVVVNLTPTESD--PVAPPLKSMHKAEGCGCLDLKRE----VLINHYLGSRGDYLERVHRYWSTYMAGDNDPVHRLNQRDVNDRVSDTITHWSCATREVLYRVDNGLDLQTG 1044
W+G GG FGL DWR+AL GG G+ +GLRG AC+ +K+ EV AVCLRTKD+ RFLPEW+AFHYA+GVDE+ IYDD+S D T EVL+PFV AGIVRYIF++I R QM+PLN CL ++ R+ E+A +W+LFHDTDEY+YP DTS+ + DAL+KH TCCA+V R+QYGS GH EMPRGL++++FL H + N PKV+VNL P+E + V PPL+SMH AEGC C K + INHYLGS GDY++R RYW G+ + RD+ND SD I HW+CATREVL+R+ GLDL+ G
Sbjct: 149 WRGAGGEFGLSADWREALSVPGGGDDEGAGAGEGLRGGGACLAEKKQAEVREILEKRGTASTTTNRVAVCLRTKDFARFLPEWIAFHYALGVDEIMIYDDDSTDNTKEVLRPFVEAGIVRYIFEVIFDRMTQMKPLNHCLEQHLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGQQFGNGLPKVMVNLDPSEPELGVVEPPLRSMHNAEGCDCAGSKSSGVSNLRINHYLGSIGDYMDRTARYWEEKKQGEMAAAKTVLHRDINDYRSDDIEHWACATREVLFRIVEGLDLEKG 488
BLAST of mRNA_E_fasciculatus_S2_contig8250.16399.1 vs.
Match: Glycosyltransferase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYE9_ECTSI) HSP 1 Score: 324 bits (830), Expect = 8.000e-107 Identity = 153/275 (55.64%), Postives = 196/275 (71.27%), Query Frame = 1
Query: 244 EVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDRTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSSHHAN--PKVVVNLTPTESDP--VAPPLKSMHKAEGCGCLDLK----REVLINHYLGSRGDYLERVHRYWSTYMAGDNDPVHRLNQRDVNDRVSDTITHWSCATREVLYRVDNGLDLQTG 1044
+VA+CLRTKD+ RFLPEW+AFHYA+GVDE+ IYDD+S D T EVL PFV AGIVRYIF++I R QM+PLN CL + R+ E+A +W+LFHDTDEY+YP DTS+ + DAL+KH TCCA+V R+QYGS GH EMPRGL++++FL H + N KV+VNL P+E + V PPL+SMH AEGC C K ++ INHYLGS GDY++R RYW G+ + +RD+N+ SD I HW+CATREVL+R+ GLDL+ G
Sbjct: 2 KVAICLRTKDFARFLPEWIAFHYALGVDEIFIYDDDSTDNTEEVLWPFVEAGIVRYIFEVIFDRMTQMKPLNHCLEQQLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGPQFGNGLAKVMVNLDPSEPEVGVVEPPLRSMHNAEGCDCAGSKFGGVSDLRINHYLGSIGDYMDRTTRYWEAKKKGEMAAAKTVLRRDINNYRSDDIEHWACATREVLFRIVEGLDLEGG 276
BLAST of mRNA_E_fasciculatus_S2_contig8250.16399.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFX9_9PHAE) HSP 1 Score: 308 bits (789), Expect = 4.010e-99 Identity = 169/333 (50.75%), Postives = 210/333 (63.06%), Query Frame = 1
Query: 118 WKGGGGPFGLDGDWRDALQEEGGDGSEDGLRGEACMTHEKRKEV----------------AVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDRTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFL--AHQNDSSHHANPKVVVNLTPTES--DPVAPPLKSMHKAEGCGCLDLK-REVLINHYLGSRGDYLERVHRYWSTYMAGDNDPVHR-LNQRDVNDRVSDTITHWSCATREVLYRVDNGLDLQTGLP 1050
W G GG FGL DWR+A G G E +RG++CM K+++V A C+RTKD+GRFLPEW+A+HYAIGVDE++IYDD+S D T E+L+PFV+AGIV YI + QM PLN CL ++ R+ D E AP WLLFHDTDEYV P DTSVT+ AL KH +TCC V R+ YG+GGH EMP+GL+++ FL AH +D + PKV VNL T+ LKSMH +GC C + E+ INHYLGSRGDYL + RYW + D V + L +RD+N SDTIT W+CATREVL V G DL LP
Sbjct: 79 WTGAGGKFGLTSDWREAAMMPGARGGEATMRGDSCMGDAKQRQVREILERRAKTPGTSKVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDDTVEILQPFVDAGIVTYILERTGHWENQMTPLNLCLEEHMVRRLGDNE-APRWLLFHDTDEYVVPVDTSVTIAQALDKHSATCCVRVPRVTYGAGGHDEMPQGLLLEVFLQHAHLHDFKSNRLPKVAVNLDTTQPLLGQARSRLKSMHNGQGCQCDVIPVDEIRINHYLGSRGDYLGKTKRYWQEVYS--RDKVEKWLLERDINSFKSDTITTWACATREVLSVVLEGSDLNKVLP 408
BLAST of mRNA_E_fasciculatus_S2_contig8250.16399.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE36_9PHAE) HSP 1 Score: 141 bits (356), Expect = 1.120e-34 Identity = 78/183 (42.62%), Postives = 113/183 (61.75%), Query Frame = 1
Query: 241 KEVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDRTSE----VLKPFVNAGIVRYIFDMI-PRRA------AQMEPLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTS-VTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSSHHAN--PKVVVNLT 747
++V C RTKD GR+LPEWVA+H+A+GVDE++I+DD+SVD T E VL+PFV AGIV++ I PR A A M PL C+ Y AP W++ DTDEY++ + + L +AL+ +TCC V +Q+G+ G + PRGL++++FL H + +S N PKV+ L+
Sbjct: 249 EQVVSCTRTKDRGRYLPEWVAYHWAMGVDEMNIFDDDSVDDTREARIFVLEPFVRAGIVKFQRRHIDPRNATSTPPSAAMPPLTECVESYRGMHDWGDRLAPRWVVLLDTDEYLWAREAGKIGLPEALEARSTTCCLQVSTVQHGTSGFSKSPRGLLLENFLTHADPTSPELNGPPKVLYCLS 431
BLAST of mRNA_E_fasciculatus_S2_contig8250.16399.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP81_9PHAE) HSP 1 Score: 116 bits (291), Expect = 3.540e-27 Identity = 57/82 (69.51%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 652 QEMPRGLVMDSFLAHQNDSSHHANPKVVVNLTPTESDPVAPPLKSMHKAEGCGCLDLKREVLINHYLGSRGDYLERVHRYWS 897
Q++ G + A Q + VVVNLTPTESDPVAPPLKSMHKAEGC CLDLK+ VLINHYLGSRGDYLERVHRYWS
Sbjct: 139 QQLEPGTPRTKYGARQTLEIKNMKKMVVVNLTPTESDPVAPPLKSMHKAEGCECLDLKQGVLINHYLGSRGDYLERVHRYWS 220
BLAST of mRNA_E_fasciculatus_S2_contig8250.16399.1 vs.
Match: Uncharacterized (protein n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A356L7D7_9PROT) HSP 1 Score: 96.3 bits (238), Expect = 6.270e-19 Identity = 74/264 (28.03%), Postives = 110/264 (41.67%), Query Frame = 1
Query: 244 EVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDRTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSSHHANPKVVVN-----------LTPTESDPVAPPLKSMHKAEGCGCLDLKREVLINHYLGSRGD-YLERVHRYWSTYMAGDNDPVHRLNQRDVNDRVSDTITHWSCATR 999
E+AV KD G +L EW+ FH GV++ +YD+ S D T+E+LKP++ GIV Y + P RA Q N +NR KNDA W+ D DE+V P V+ + YGS GH P GLV+++F H D + A K +VN + V K + + + ++ NHY+ D Y+ R R + + R D+ND + W+ +
Sbjct: 63 ELAVLAVMKDEGAYLKEWLDFHILAGVEKFYLYDNESTDNTTEILKPYIERGIVEYKY--WPGRAQQ----NPVYWDGLNRHKNDAR----WIAVIDLDEFVVPVQNKTITEFLHTLPRGARELVMTWVMYGSSGHVHKPDGLVIENFRCHA-DRTRPAGCKSIVNPRFITRWANPHINEVAGFVVDENGKKLGRIDQTNNPPTYNKIRCNHYVTKSFDEYMSRGTRMAVSGRIAPHRTPERFRMNDMNDICDPIMDEWAARVK 315
BLAST of mRNA_E_fasciculatus_S2_contig8250.16399.1 vs.
Match: Glycosyltransferase (family 92 protein n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A520BS46_9SPHI) HSP 1 Score: 94.7 bits (234), Expect = 1.530e-18 Identity = 51/151 (33.77%), Postives = 80/151 (52.98%), Query Frame = 1
Query: 247 VAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDRTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCL-RHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAH 696
+A+C K+ G + EW+ +H +GV++ IYD+ S D T E+L P+V G+V YIF P Q+ + CL +H ++ + WL D DE++ P +T+ D LK HE + + YGSGG +E +G +M+ F H
Sbjct: 52 LAICAIAKNEGPYFEEWITWHQKLGVEKFYIYDNESTDNTREILAPYVETGLVDYIF--WPGLKQQLITYDDCLEKHRLDTR---------WLAVIDMDEFIKPIQ-DLTITDFLKNHEDVPAVEINWLVYGSGGAKEKEQGSIMERFKKH 190
BLAST of mRNA_E_fasciculatus_S2_contig8250.16399.1 vs.
Match: Uncharacterized (protein n=1 Tax=Prevotella sp. CAG:1058 TaxID=1262918 RepID=R5CAV1_9BACT) HSP 1 Score: 92.0 bits (227), Expect = 1.350e-17 Identity = 57/177 (32.20%), Postives = 90/177 (50.85%), Query Frame = 1
Query: 223 MTHEKRKE---VAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDRTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCL-RHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSSHHANPKVVVN 741
+ H+K + +AVC K+ G + EWV +H+ GVD+ IYD+ S D T EVLKP++ +G+V YI+ P Q+ + CL RH + + W+ F D DE++ P + + L + ES + + YGSGG ++ +G +M+ F HHA P +N
Sbjct: 40 LKHDKTQPKYYLAVCAIAKNEGPYFKEWVDWHHEQGVDKFYIYDNESTDCTKEVLKPYIESGLVEYIY--YPGYRRQLAAYDDCLERHRFDSR---------WIAFIDLDEFIVPVKDH-NIPEFLHRFESFPAVEINWLIYGSGGAKKKVQGTMMERF-------KHHATPSHYLN 197
BLAST of mRNA_E_fasciculatus_S2_contig8250.16399.1 vs.
Match: Glycosyltransferase (family 2 protein n=1 Tax=Waltera intestinalis TaxID=2606635 RepID=A0A6L5YK66_9FIRM) HSP 1 Score: 89.0 bits (219), Expect = 2.900e-16 Identity = 45/160 (28.12%), Postives = 85/160 (53.12%), Query Frame = 1
Query: 244 EVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDRTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDAL----KKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSS 711
++A+ KD G ++ EW+ +H GVD+ ++D+ S D +LK +++ GIV YI+ +P RA Q++ ++ KK A+ ++++ D DE++ D S LY+ + + + + V YGS G++ P GLVM++++ D +
Sbjct: 65 KLAIAAIMKDEGLYIEEWLCYHIIRGVDKFFLFDNGSSDNIKNILKKYIDVGIVEYIY--LPGRAKQLDA------YFAATKK--AKKTVKYIMYLDCDEFITTADASADLYEVIHSVFEAYTNAAAVAVNWYVYGSNGYKTKPEGLVMENYVYRAKDEA 214 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8250.16399.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8250.16399.1 >prot_E_fasciculatus_S2_contig8250.16399.1 ID=prot_E_fasciculatus_S2_contig8250.16399.1|Name=mRNA_E_fasciculatus_S2_contig8250.16399.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=354bp LEVGEEPTRSPQSKDEKKGDDSTEPPEKKSNDSTEPPESWKGGGGPFGLDback to top mRNA from alignment at E_fasciculatus_S2_contig8250:2285..6719- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8250.16399.1 ID=mRNA_E_fasciculatus_S2_contig8250.16399.1|Name=mRNA_E_fasciculatus_S2_contig8250.16399.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4435bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8250:2285..6719- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8250:2285..6719- >mRNA_E_fasciculatus_S2_contig8250.16399.1 ID=mRNA_E_fasciculatus_S2_contig8250.16399.1|Name=mRNA_E_fasciculatus_S2_contig8250.16399.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1062bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8250:2285..6719- (Ectocarpus fasciculatus EfasUO2)back to top |