mRNA_E_fasciculatus_S2_contig8250.16399.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8250.16399.1
Unique NamemRNA_E_fasciculatus_S2_contig8250.16399.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8250.16399.1 vs.
Match: Glycosyltransferase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLX6_ECTSI)

HSP 1 Score: 641 bits (1654), Expect = 6.900e-230
Identity = 311/354 (87.85%), Postives = 329/354 (92.94%), Query Frame = 1
Query:    1 LEVGEE-PTRSPQSKDEKKGDDSTEPPXXXXXXXXXXXXSWKGGGGPFGLDGDWRDALQEEGGDGSEDGLRGEACMTHEKRKEVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDRTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSSHHANPKVVVNLTPTESDPVAPPLKSMHKAEGCGCLDLKREVLINHYLGSRGDYLERVHRYWSTYMAGDNDPVHRLNQRDVNDRVSDTITHWSCATREVLYRVDNGLDLQTGLPRST 1059
            +E+GEE PT+SPQSKDEKK DDSTEPP            SWKG GGPFG+DGDWR+ALQE+GGDG+E+GLRGEACMTHE RKEVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVD+TSEVLKPFV+AGIVRYIFDMIPRR AQMEPLNRCLRHYINRKK+D ENAPSWLLFHD DEYVYP DTS+TL+DAL KHESTCCA+VRRIQYGSGGH EMPRGLVMDSF+AHQNDSSHHANPKVVVNLTPTESDPVAPPLKSMHKAEGC CLDLK+EVLINHYLGSRGDYLERVHRYWSTYMAGDNDP HRL+QRDVNDRVSDTITHWSC+TREVLYRVDNGLDLQTGLP ST
Sbjct:  104 VELGEELPTQSPQSKDEKKSDDSTEPPE-----------SWKGRGGPFGIDGDWRNALQEDGGDGAENGLRGEACMTHENRKEVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDQTSEVLKPFVSAGIVRYIFDMIPRRNAQMEPLNRCLRHYINRKKDDPENAPSWLLFHDNDEYVYPRDTSMTLFDALNKHESTCCALVRRIQYGSGGHDEMPRGLVMDSFMAHQNDSSHHANPKVVVNLTPTESDPVAPPLKSMHKAEGCACLDLKQEVLINHYLGSRGDYLERVHRYWSTYMAGDNDPGHRLSQRDVNDRVSDTITHWSCSTREVLYRVDNGLDLQTGLPPST 446          
BLAST of mRNA_E_fasciculatus_S2_contig8250.16399.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB75_9PHAE)

HSP 1 Score: 355 bits (912), Expect = 2.390e-116
Identity = 179/340 (52.65%), Postives = 226/340 (66.47%), Query Frame = 1
Query:  118 WKGGGGPFGLDGDWRDALQEEGGD-----GSEDGLRGE-ACMTHEKRKEV-----------------AVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDRTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSSHHAN--PKVVVNLTPTESD--PVAPPLKSMHKAEGCGCLDLKRE----VLINHYLGSRGDYLERVHRYWSTYMAGDNDPVHRLNQRDVNDRVSDTITHWSCATREVLYRVDNGLDLQTG 1044
            W+G GG FGL  DWR+AL   GG      G+ +GLRG  AC+  +K+ EV                 AVCLRTKD+ RFLPEW+AFHYA+GVDE+ IYDD+S D T EVL+PFV AGIVRYIF++I  R  QM+PLN CL  ++ R+    E+A +W+LFHDTDEY+YP DTS+ + DAL+KH  TCCA+V R+QYGS GH EMPRGL++++FL H +      N  PKV+VNL P+E +   V PPL+SMH AEGC C   K      + INHYLGS GDY++R  RYW     G+      +  RD+ND  SD I HW+CATREVL+R+  GLDL+ G
Sbjct:  149 WRGAGGEFGLSADWREALSVPGGGDDEGAGAGEGLRGGGACLAEKKQAEVREILEKRGTASTTTNRVAVCLRTKDFARFLPEWIAFHYALGVDEIMIYDDDSTDNTKEVLRPFVEAGIVRYIFEVIFDRMTQMKPLNHCLEQHLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGQQFGNGLPKVMVNLDPSEPELGVVEPPLRSMHNAEGCDCAGSKSSGVSNLRINHYLGSIGDYMDRTARYWEEKKQGEMAAAKTVLHRDINDYRSDDIEHWACATREVLFRIVEGLDLEKG 488          
BLAST of mRNA_E_fasciculatus_S2_contig8250.16399.1 vs.
Match: Glycosyltransferase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYE9_ECTSI)

HSP 1 Score: 324 bits (830), Expect = 8.000e-107
Identity = 153/275 (55.64%), Postives = 196/275 (71.27%), Query Frame = 1
Query:  244 EVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDRTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSSHHAN--PKVVVNLTPTESDP--VAPPLKSMHKAEGCGCLDLK----REVLINHYLGSRGDYLERVHRYWSTYMAGDNDPVHRLNQRDVNDRVSDTITHWSCATREVLYRVDNGLDLQTG 1044
            +VA+CLRTKD+ RFLPEW+AFHYA+GVDE+ IYDD+S D T EVL PFV AGIVRYIF++I  R  QM+PLN CL   + R+    E+A +W+LFHDTDEY+YP DTS+ + DAL+KH  TCCA+V R+QYGS GH EMPRGL++++FL H +      N   KV+VNL P+E +   V PPL+SMH AEGC C   K     ++ INHYLGS GDY++R  RYW     G+      + +RD+N+  SD I HW+CATREVL+R+  GLDL+ G
Sbjct:    2 KVAICLRTKDFARFLPEWIAFHYALGVDEIFIYDDDSTDNTEEVLWPFVEAGIVRYIFEVIFDRMTQMKPLNHCLEQQLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGPQFGNGLAKVMVNLDPSEPEVGVVEPPLRSMHNAEGCDCAGSKFGGVSDLRINHYLGSIGDYMDRTTRYWEAKKKGEMAAAKTVLRRDINNYRSDDIEHWACATREVLFRIVEGLDLEGG 276          
BLAST of mRNA_E_fasciculatus_S2_contig8250.16399.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFX9_9PHAE)

HSP 1 Score: 308 bits (789), Expect = 4.010e-99
Identity = 169/333 (50.75%), Postives = 210/333 (63.06%), Query Frame = 1
Query:  118 WKGGGGPFGLDGDWRDALQEEGGDGSEDGLRGEACMTHEKRKEV----------------AVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDRTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFL--AHQNDSSHHANPKVVVNLTPTES--DPVAPPLKSMHKAEGCGCLDLK-REVLINHYLGSRGDYLERVHRYWSTYMAGDNDPVHR-LNQRDVNDRVSDTITHWSCATREVLYRVDNGLDLQTGLP 1050
            W G GG FGL  DWR+A    G  G E  +RG++CM   K+++V                A C+RTKD+GRFLPEW+A+HYAIGVDE++IYDD+S D T E+L+PFV+AGIV YI +       QM PLN CL  ++ R+  D E AP WLLFHDTDEYV P DTSVT+  AL KH +TCC  V R+ YG+GGH EMP+GL+++ FL  AH +D   +  PKV VNL  T+         LKSMH  +GC C  +   E+ INHYLGSRGDYL +  RYW    +   D V + L +RD+N   SDTIT W+CATREVL  V  G DL   LP
Sbjct:   79 WTGAGGKFGLTSDWREAAMMPGARGGEATMRGDSCMGDAKQRQVREILERRAKTPGTSKVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDDTVEILQPFVDAGIVTYILERTGHWENQMTPLNLCLEEHMVRRLGDNE-APRWLLFHDTDEYVVPVDTSVTIAQALDKHSATCCVRVPRVTYGAGGHDEMPQGLLLEVFLQHAHLHDFKSNRLPKVAVNLDTTQPLLGQARSRLKSMHNGQGCQCDVIPVDEIRINHYLGSRGDYLGKTKRYWQEVYS--RDKVEKWLLERDINSFKSDTITTWACATREVLSVVLEGSDLNKVLP 408          
BLAST of mRNA_E_fasciculatus_S2_contig8250.16399.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE36_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 1.120e-34
Identity = 78/183 (42.62%), Postives = 113/183 (61.75%), Query Frame = 1
Query:  241 KEVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDRTSE----VLKPFVNAGIVRYIFDMI-PRRA------AQMEPLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTS-VTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSSHHAN--PKVVVNLT 747
            ++V  C RTKD GR+LPEWVA+H+A+GVDE++I+DD+SVD T E    VL+PFV AGIV++    I PR A      A M PL  C+  Y          AP W++  DTDEY++  +   + L +AL+   +TCC  V  +Q+G+ G  + PRGL++++FL H + +S   N  PKV+  L+
Sbjct:  249 EQVVSCTRTKDRGRYLPEWVAYHWAMGVDEMNIFDDDSVDDTREARIFVLEPFVRAGIVKFQRRHIDPRNATSTPPSAAMPPLTECVESYRGMHDWGDRLAPRWVVLLDTDEYLWAREAGKIGLPEALEARSTTCCLQVSTVQHGTSGFSKSPRGLLLENFLTHADPTSPELNGPPKVLYCLS 431          
BLAST of mRNA_E_fasciculatus_S2_contig8250.16399.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP81_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 3.540e-27
Identity = 57/82 (69.51%), Postives = 62/82 (75.61%), Query Frame = 1
Query:  652 QEMPRGLVMDSFLAHQNDSSHHANPKVVVNLTPTESDPVAPPLKSMHKAEGCGCLDLKREVLINHYLGSRGDYLERVHRYWS 897
            Q++  G     + A Q     +    VVVNLTPTESDPVAPPLKSMHKAEGC CLDLK+ VLINHYLGSRGDYLERVHRYWS
Sbjct:  139 QQLEPGTPRTKYGARQTLEIKNMKKMVVVNLTPTESDPVAPPLKSMHKAEGCECLDLKQGVLINHYLGSRGDYLERVHRYWS 220          
BLAST of mRNA_E_fasciculatus_S2_contig8250.16399.1 vs.
Match: Uncharacterized (protein n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A356L7D7_9PROT)

HSP 1 Score: 96.3 bits (238), Expect = 6.270e-19
Identity = 74/264 (28.03%), Postives = 110/264 (41.67%), Query Frame = 1
Query:  244 EVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDRTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSSHHANPKVVVN-----------LTPTESDPVAPPLKSMHKAEGCGCLDLKREVLINHYLGSRGD-YLERVHRYWSTYMAGDNDPVHRLNQRDVNDRVSDTITHWSCATR 999
            E+AV    KD G +L EW+ FH   GV++  +YD+ S D T+E+LKP++  GIV Y +   P RA Q    N      +NR KNDA     W+   D DE+V P                    V+  + YGS GH   P GLV+++F  H  D +  A  K +VN           +       V    K + + +         ++  NHY+    D Y+ R  R   +     +    R    D+ND     +  W+   +
Sbjct:   63 ELAVLAVMKDEGAYLKEWLDFHILAGVEKFYLYDNESTDNTTEILKPYIERGIVEYKY--WPGRAQQ----NPVYWDGLNRHKNDAR----WIAVIDLDEFVVPVQNKTITEFLHTLPRGARELVMTWVMYGSSGHVHKPDGLVIENFRCHA-DRTRPAGCKSIVNPRFITRWANPHINEVAGFVVDENGKKLGRIDQTNNPPTYNKIRCNHYVTKSFDEYMSRGTRMAVSGRIAPHRTPERFRMNDMNDICDPIMDEWAARVK 315          
BLAST of mRNA_E_fasciculatus_S2_contig8250.16399.1 vs.
Match: Glycosyltransferase (family 92 protein n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A520BS46_9SPHI)

HSP 1 Score: 94.7 bits (234), Expect = 1.530e-18
Identity = 51/151 (33.77%), Postives = 80/151 (52.98%), Query Frame = 1
Query:  247 VAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDRTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCL-RHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAH 696
            +A+C   K+ G +  EW+ +H  +GV++  IYD+ S D T E+L P+V  G+V YIF   P    Q+   + CL +H ++ +         WL   D DE++ P    +T+ D LK HE      +  + YGSGG +E  +G +M+ F  H
Sbjct:   52 LAICAIAKNEGPYFEEWITWHQKLGVEKFYIYDNESTDNTREILAPYVETGLVDYIF--WPGLKQQLITYDDCLEKHRLDTR---------WLAVIDMDEFIKPIQ-DLTITDFLKNHEDVPAVEINWLVYGSGGAKEKEQGSIMERFKKH 190          
BLAST of mRNA_E_fasciculatus_S2_contig8250.16399.1 vs.
Match: Uncharacterized (protein n=1 Tax=Prevotella sp. CAG:1058 TaxID=1262918 RepID=R5CAV1_9BACT)

HSP 1 Score: 92.0 bits (227), Expect = 1.350e-17
Identity = 57/177 (32.20%), Postives = 90/177 (50.85%), Query Frame = 1
Query:  223 MTHEKRKE---VAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDRTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCL-RHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSSHHANPKVVVN 741
            + H+K +    +AVC   K+ G +  EWV +H+  GVD+  IYD+ S D T EVLKP++ +G+V YI+   P    Q+   + CL RH  + +         W+ F D DE++ P      + + L + ES     +  + YGSGG ++  +G +M+ F        HHA P   +N
Sbjct:   40 LKHDKTQPKYYLAVCAIAKNEGPYFKEWVDWHHEQGVDKFYIYDNESTDCTKEVLKPYIESGLVEYIY--YPGYRRQLAAYDDCLERHRFDSR---------WIAFIDLDEFIVPVKDH-NIPEFLHRFESFPAVEINWLIYGSGGAKKKVQGTMMERF-------KHHATPSHYLN 197          
BLAST of mRNA_E_fasciculatus_S2_contig8250.16399.1 vs.
Match: Glycosyltransferase (family 2 protein n=1 Tax=Waltera intestinalis TaxID=2606635 RepID=A0A6L5YK66_9FIRM)

HSP 1 Score: 89.0 bits (219), Expect = 2.900e-16
Identity = 45/160 (28.12%), Postives = 85/160 (53.12%), Query Frame = 1
Query:  244 EVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDRTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDAL----KKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSS 711
            ++A+    KD G ++ EW+ +H   GVD+  ++D+ S D    +LK +++ GIV YI+  +P RA Q++       ++   KK  A+    ++++ D DE++   D S  LY+ +    + + +     V    YGS G++  P GLVM++++    D +
Sbjct:   65 KLAIAAIMKDEGLYIEEWLCYHIIRGVDKFFLFDNGSSDNIKNILKKYIDVGIVEYIY--LPGRAKQLDA------YFAATKK--AKKTVKYIMYLDCDEFITTADASADLYEVIHSVFEAYTNAAAVAVNWYVYGSNGYKTKPEGLVMENYVYRAKDEA 214          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8250.16399.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Glycosyltransferase6.900e-23087.85n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
Uncharacterized2.390e-11652.65protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Glycosyltransferase8.000e-10755.64n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
Uncharacterized4.010e-9950.75protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5... [more]
Uncharacterized1.120e-3442.62protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.540e-2769.51protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized6.270e-1928.03protein n=2 Tax=Alphaproteobacteria bacterium TaxI... [more]
Glycosyltransferase1.530e-1833.77family 92 protein n=2 Tax=Bacteroidetes TaxID=976 ... [more]
Uncharacterized1.350e-1732.20protein n=1 Tax=Prevotella sp. CAG:1058 TaxID=1262... [more]
Glycosyltransferase2.900e-1628.13family 2 protein n=1 Tax=Waltera intestinalis TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8250contigE_fasciculatus_S2_contig8250:2285..6719 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeBacteria
Stop1
Start0
Seed ortholog score86.7
Seed ortholog evalue2.4e-14
Seed eggNOG ortholog1002367.HMPREF0673_01304
Model size1062
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.Glycosyltransferase family 92
EggNOG OGs2G2GR@200643,4NW1M@976,COG0463@1,COG0463@2
Ec32 ortholog descriptionNucleotide-diphospho-sugar transferases
Ec32 orthologEc-22_000100.1
Cds size1062
COG Functional cat.M
Best tax levelBacteroidia
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8250.16399.1prot_E_fasciculatus_S2_contig8250.16399.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8250 2285..6719 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842485.498586-CDS-E_fasciculatus_S2_contig8250:2284..24491696842485.498586-CDS-E_fasciculatus_S2_contig8250:2284..2449Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8250 2285..2449 -
1696842485.5109694-CDS-E_fasciculatus_S2_contig8250:3178..33461696842485.5109694-CDS-E_fasciculatus_S2_contig8250:3178..3346Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8250 3179..3346 -
1696842485.5199666-CDS-E_fasciculatus_S2_contig8250:3953..40641696842485.5199666-CDS-E_fasciculatus_S2_contig8250:3953..4064Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8250 3954..4064 -
1696842485.530431-CDS-E_fasciculatus_S2_contig8250:4712..48991696842485.530431-CDS-E_fasciculatus_S2_contig8250:4712..4899Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8250 4713..4899 -
1696842485.542197-CDS-E_fasciculatus_S2_contig8250:5491..56761696842485.542197-CDS-E_fasciculatus_S2_contig8250:5491..5676Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8250 5492..5676 -
1696842485.5529118-CDS-E_fasciculatus_S2_contig8250:6473..67191696842485.5529118-CDS-E_fasciculatus_S2_contig8250:6473..6719Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8250 6474..6719 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8250.16399.1

>prot_E_fasciculatus_S2_contig8250.16399.1 ID=prot_E_fasciculatus_S2_contig8250.16399.1|Name=mRNA_E_fasciculatus_S2_contig8250.16399.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=354bp
LEVGEEPTRSPQSKDEKKGDDSTEPPEKKSNDSTEPPESWKGGGGPFGLD
GDWRDALQEEGGDGSEDGLRGEACMTHEKRKEVAVCLRTKDYGRFLPEWV
AFHYAIGVDEVSIYDDNSVDRTSEVLKPFVNAGIVRYIFDMIPRRAAQME
PLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHE
STCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSSHHANPKVVVNLTP
TESDPVAPPLKSMHKAEGCGCLDLKREVLINHYLGSRGDYLERVHRYWST
YMAGDNDPVHRLNQRDVNDRVSDTITHWSCATREVLYRVDNGLDLQTGLP
RST*
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mRNA from alignment at E_fasciculatus_S2_contig8250:2285..6719-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8250.16399.1 ID=mRNA_E_fasciculatus_S2_contig8250.16399.1|Name=mRNA_E_fasciculatus_S2_contig8250.16399.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4435bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8250:2285..6719- (Ectocarpus fasciculatus EfasUO2)
CTCGAGGTTGGAGAGGAACCGACGCGGTCGCCGCAATCAAAAGACGAGAA GAAGGGCGACGATTCCACGGAACCCCCCGAGAAGAAGAGCAATGATTCTA CGGAGCCCCCCGAATCCTGGAAGGGGGGGGGGGGTCCTTTCGGACTCGAC GGTGATTGGCGAGACGCGCTGCAGGAGGAGGGGGGGGACGGGAGTGAGGA CGGGCTGCGAGGGGAGGCTTGCATGACGCACGAGAAGCGGAAGGAAGTGC GAGACATTCTGGAGAAAAGGAAGATCGATCCACCGAGACAGAAGGTATGT TTCTTCTACATCACATCGCTCTTCTGGCCCTTGGATAGCGCCCGCACTTC CAGAACTCCGTGCACTCAACATTGTATCGAACTTAAGGACTTGAACGTTA TTGTGTGCTCAACGTTGTCGAACATGAGCACTCGAGCATCATTTATTTGT GTGCCCACTTAAAAACCCCTACACTAACACCTATATATATATAATGTATA TATATAGTCTATAGCCCTAGCAACGAAATGAAATGAGAACCCCAGCCTCG GCCAAAACTACTGTCTGTCGAGGTTGTAAGTTGTAGGGCGGTTGCTATCT GCGTGCTGCAGGACTTGGTTGGACAATCAAGAGAGAGAGATCGTTCGAAC GACAGGGTAGGAGGAGCATATGACACGGTCGAGGGCAGGGAACCACTAAC CAGCAAGCATGGCTCTCATCTTGGTGTTGCTTCTGCTGTTAACAGTTGCT ATTGTGCTATTGCTATTGGACGCCGTCAACGGGTAGCTGAACCCAATAAC CAATAAGGACCCTACCCTGAAGGGACACGTTCAAGCGTTATACATTCATG CTGCTGTATTTTTTTTCTCACAACCTGCTGCAACGAAAAACATGTTTTTT TTTTTCTTGAAAAGTGACAACCAACATCATGCTGTTCTTGCCTCACTGTT TGTTTTTCTAACAACACGCCAGCGAAACACATGTTTGTTTTTGTCGAAAC GAATTTGTTTTTTTGTTCTGCCCCGCCTATCCGTGGAACGAAGGTGGCTG TATGCCTCCGCACCAAGGACTACGGAAGGTTCCTCCCCGAGTGGGTGGCC TTCCACTACGCCATTGGCGTGGACGAAGTCTCGATCTACGACGACAACAG CGTGGATCGCACGTCGGAGGTGCTCAAGCCTTTCGTAAACGCCGGCATCG TTCGGTACATCTTCGACATGATCCCTAGGTGAGGATAGACAGCTGTTCTG GGCATTTCTCACGTCCACGTACACATGTATTTCTTGCAAGTTGTTGCCAA CCACCCTTTGCGGGGGTAGTTCGCCTGTACAGGTGCAACCTGAGGGATTA CAGATTACAGAACGCGGCACCCCTTAAGAACATGTTATTTTGGCCGAGGC TCGGTACGCCCTCGGCGACTACAATATAGTTTTAGTACTGTAGTATAGGT TTTAGTGCAGGCTCTTGACTGAGAACACCTGCCTGTTCTGCTGTTCTTTA TGGCCAAGTTATTTTTATTTTTTCGACTCAAGTTCTTAAGGGTTGGCGCG TTCTCTATTGGACAATATTCAGGGTGGCGGTGTCCGCAATCATGAGGTTG GGTGTGTGTGTGTGTGTGTGTTGTTTTTTTGTCGGGGGTGTACTCATAGT CGTGCATGCCGTAGTCGTTAAACCGTTGACCTCGCACTCCTACAAAGCCT GGACGGAGCACGCCGGGTTCTCACCGGACCAGGCTCTCACATCACCATAT GATATTTTTGTACAGTTTTGGAGACGCAATAAAATATCCGGTGTATGCTG CTGCTTGTTGTGTCGGGCAGGCGGGCCGCCCAGATGGAGCCTCTGAACCG CTGCTTGCGGCACTACATCAACCGAAAAAAGAACGACGCCGAGAACGCTC CCAGCTGGCTGCTGTTCCACGACACCGACGAGTACGTCTACCCAGGGGAC ACCAGCGTCACCCTCTACGACGCCCTCAAGAAGCATGAGTCTACCTGCTG TGCCGTGGTGTGTTGGCAGTACGGGTAGGGTGGAGTAGCTTCTGCTGCCG CAGTTGTTAATTGTTGATGCTGCTGCTGCTGCTGCTGCTGCTACTGCTTT CTGTTGTATCCGGTGTTGTTTTCACGCTAAGAGGGCCACGTCCCTGTTTA CCTCTTCCATCCGGAGGTACTGGGTAGAGAGATCGGAACGGTTTTTACGC TTTGAATATCAAGACAACAACAACAACAACAACAACAACAACAACAACAA CAACAACAACAACAACAACAACAACAACAACAACAACACTTCACCAGTGT CCACGCTACCGCGCTTTCGCTGCTGGTCGTTGATGGGATCGAGAGCAGGT TAGGCTTAACGAAACGCTTCCTTCGGCTTGCTGTGATAGGCCATTCGTAC ATAGACGCCGTTTTTTTCGCTTCTTGTGGGCACCTGACAGGTTCTCGGGC GTTGTTTCATGCGTATCGTGAGGGCTTAGGTATTGTATGCGCATCATATT GCAGGTGACAGGTGCTTAGTTACGCGTTGTTTTTTGCGCATCATATTGGC ACATGACACGTGCTTAGTTAGGCGTTGTTTTATGCACCATCGTATTTGGC ACGTGACGGGCTCAGACGTTGTTGCTTTTGTTCGCACCGTATTGGCACCT GACAGGTGCGCCGCATCCAGTACGGCTCGGGAGGGCACCAAGAGATGCCC AGGGGGTTGGTGATGGATAGCTTCCTGGCTCACCAGAATGACTCTTCGCA TCACGCCAATCCCAAGGTAGGCATGCATGCAATCTACGAGGAACGTTAGT CCTCGAAAGGCTTTTGACAGTGTACTGTTGTTGGTGGTGGTGGTGGTCGT GTTGAATGCATGGCGTTGTACTAAAATTGTTGGTGGGTGGGTGGGCGTTG TGACGGCGTTTAGTATGTAGACTATTCTGGTGTTGTTGTCGTCCTTGTTT GGTGGTGGTGTTACTCGTTCTACCGCTCGTCGTCGTGTGTCGCATGAAGC ATGCAACCCTGTGCTGCACCCTACCCAAACGCTAACCCGGGTGTACCCCC TCCTGACCCCAAAGAACGGCGAGCGTTCTGTCCTTCCTCGTTATCCGTAA CATCTATGCATACCATGTGGAATTGCTCGGTTTGCTGGGTCGATGGGTCA GGTTATGGTGAAATTATTCGCCGGATACACGCCACTGTACCACGTTACAT TTATTTCTGTTATGCCGCGGCGAATGCGAAGAACGGTTTTTAAACACAAC CGGCACTGATTATCAATTTTTTATGAAGTTCTCAAGCAAGTTCAACGTGG ATCCGAGGTAGGAAGGACGAGCACCAACGTCGCTCCCGTTTTGCTTTTTC TTCCTTCCGTGGTGTTGTGCCAGGTCGTGGTTAATCTGACTCCTACCGAA TCGGATCCAGTAGCGCCTCCGCTCAAGAGCATGCACAAGGCGGAGGGGTG CGGATGCCTAGACTTGAAGCGGGAAGTGCTCATCAACCATTACCTGGGAT CCCGGGGAGACTACCTGGAAAGGGTACATCGGTACTGGTCGGTGAGATAC GATTTAGCACGATGCTGGTCTTCCGGGTTGGCAGGTTTTATACGTGTGTG TCCTTCCTTGCTCGTGTTGCCGAACGTCACCACCCTGGTCCCCCGATGTG GCATGCTTGCGTTTCTAGGTTACCGCCTCGACGCAAAGCATCGCCAAGGT GTGCACGAAGTCGTTGCTCTCTGAGACTCGAAACAAGCAGTCAAGAGGTC TCCAACATCAACGCTCTTCCCTTTTTTGTCAGATCTCCACTACAATCACT TATTGAAGGCACAAAGACGTGTTTCCTTCACTAGAATTTCCTGGGAGGGT CGAAGGACGTAAATGCTACATTCAATTTAAAACCATACTAGCTGCAATCG TAGCCAGCCGTAGTCTACGGACTACCCTTTCGAGCTATAAACCAAACCCT CAAATACCCTCAAATGACAAATAAAATCTTCTTTGTCTCCCTCCCTTCCG ATATGAACGCACAGAAAACCTCAAATAAATACCCTCAATTGAACATTTTC TTCCTGTTCTCGTTCGCTGCCCCCCCCCACCCCCCCCCCCCCCCCCCACA CCCCCAAGCCACCAAGAACACTCCAACCAGCACAGCAACCCAAACCACAC CAGACAAGANNNNNNNNNNAACGCCAAAAAAAAAACCCAAAAAAAAACCC CCCATTTAAAATTTTTTTTCTTTTTTCGTTCGCCGCCCCCCCCCCCCCCC CTCCACTATGAACGCCACAGACGTATATGGCAGGCGACAACGATCCCGTT CACAGGCTCAACCAGAGGGATGTAAACGACCGCGTGTCGGACACCATCAC CCACTGGTCTTGCGCTACTCGAGAGGTGCTCTACCGAGTGGACAACGGCC TCGACCTGCAGACGGGACTGCCCCGTTCCACTTGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8250:2285..6719-

>mRNA_E_fasciculatus_S2_contig8250.16399.1 ID=mRNA_E_fasciculatus_S2_contig8250.16399.1|Name=mRNA_E_fasciculatus_S2_contig8250.16399.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1062bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8250:2285..6719- (Ectocarpus fasciculatus EfasUO2)
CTCGAGGTTGGAGAGGAACCGACGCGGTCGCCGCAATCAAAAGACGAGAA
GAAGGGCGACGATTCCACGGAACCCCCCGAGAAGAAGAGCAATGATTCTA
CGGAGCCCCCCGAATCCTGGAAGGGGGGGGGGGGTCCTTTCGGACTCGAC
GGTGATTGGCGAGACGCGCTGCAGGAGGAGGGGGGGGACGGGAGTGAGGA
CGGGCTGCGAGGGGAGGCTTGCATGACGCACGAGAAGCGGAAGGAAGTGG
CTGTATGCCTCCGCACCAAGGACTACGGAAGGTTCCTCCCCGAGTGGGTG
GCCTTCCACTACGCCATTGGCGTGGACGAAGTCTCGATCTACGACGACAA
CAGCGTGGATCGCACGTCGGAGGTGCTCAAGCCTTTCGTAAACGCCGGCA
TCGTTCGGTACATCTTCGACATGATCCCTAGGCGGGCCGCCCAGATGGAG
CCTCTGAACCGCTGCTTGCGGCACTACATCAACCGAAAAAAGAACGACGC
CGAGAACGCTCCCAGCTGGCTGCTGTTCCACGACACCGACGAGTACGTCT
ACCCAGGGGACACCAGCGTCACCCTCTACGACGCCCTCAAGAAGCATGAG
TCTACCTGCTGTGCCGTGGTGCGCCGCATCCAGTACGGCTCGGGAGGGCA
CCAAGAGATGCCCAGGGGGTTGGTGATGGATAGCTTCCTGGCTCACCAGA
ATGACTCTTCGCATCACGCCAATCCCAAGGTCGTGGTTAATCTGACTCCT
ACCGAATCGGATCCAGTAGCGCCTCCGCTCAAGAGCATGCACAAGGCGGA
GGGGTGCGGATGCCTAGACTTGAAGCGGGAAGTGCTCATCAACCATTACC
TGGGATCCCGGGGAGACTACCTGGAAAGGGTACATCGGTACTGGTCGACG
TATATGGCAGGCGACAACGATCCCGTTCACAGGCTCAACCAGAGGGATGT
AAACGACCGCGTGTCGGACACCATCACCCACTGGTCTTGCGCTACTCGAG
AGGTGCTCTACCGAGTGGACAACGGCCTCGACCTGCAGACGGGACTGCCC
CGTTCCACTTGA
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