mRNA_E_fasciculatus_S2_contig7546.15710.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7546.15710.1 vs.
Match: EF-hand (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXP9_9PHAE) HSP 1 Score: 246 bits (628), Expect = 8.510e-81 Identity = 123/129 (95.35%), Postives = 127/129 (98.45%), Query Frame = 2
Query: 32 GEGAGWWSRYKNDTISMADLALTLVSTCHPREMPVFLARVQAIQKKRKQIPLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAVTSTDFARAAKVISGKELSPECVWLVFKMFDRGADGRLEHDELIE 418
G+G+GWWSRYKNDTISMADLALTLVST HPR+MPVFLARVQAIQKKRKQIPLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAVT+TDFARAAKVISGKELSPECVWLVFKMFD GADGRLEHDELIE
Sbjct: 71 GDGSGWWSRYKNDTISMADLALTLVSTSHPRKMPVFLARVQAIQKKRKQIPLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAVTATDFARAAKVISGKELSPECVWLVFKMFDSGADGRLEHDELIE 199
BLAST of mRNA_E_fasciculatus_S2_contig7546.15710.1 vs.
Match: Uncharacterized (protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SJ15_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 3.290e-11 Identity = 41/119 (34.45%), Postives = 64/119 (53.78%), Query Frame = 2
Query: 62 KNDTISMADLALTLVSTCHPREMPVFLARVQAIQKKRKQIPLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAVTSTDFARAAKVISGKELSPECVWLVFKMFDRGADGRLEHDELIE 418
K T+S+ D ALTL+S P ++P +L RVQ + + + H ++ + D++ A + + +T DF RAA V+SG ELS V L F++FD A+G L+H EL +
Sbjct: 318 KQQTMSVHDFALTLISCFDPEKLPPYLDRVQELNASDGVVMWDEFFAFHFNVQCNLPDIKLAFEL----TGADEITEADFVRAAHVVSGVELSSPVVQLAFRIFDENANGTLDHSELFK 432
BLAST of mRNA_E_fasciculatus_S2_contig7546.15710.1 vs.
Match: Uncharacterized (protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4ZSQ1_PHYSP) HSP 1 Score: 68.6 bits (166), Expect = 7.860e-11 Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = 2
Query: 62 KNDTISMADLALTLVSTCHPREMPVFLARVQAIQKKRKQIPLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAVTSTDFARAAKVISGKELSPECVWLVFKMFDRGADGRLEHDELIE 418
K T+S+ D ALTLVS P ++ +L RVQ + I + H ++ H D++ A + + VT DF RAA V+SG ELS V L F++FD A+G L+ EL +
Sbjct: 261 KEQTMSVHDFALTLVSCFDPDKLSPYLERVQELNASEGVITWEEFFAFHFNVQSHLPDIKLAFEL----TGADEVTEADFIRAAHVVSGVELSSPVVQLAFRIFDDDANGTLDQSELFK 375
BLAST of mRNA_E_fasciculatus_S2_contig7546.15710.1 vs.
Match: Calciumbinding (atopy-related autoantigen n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AS55_PLAHL) HSP 1 Score: 68.2 bits (165), Expect = 1.130e-10 Identity = 40/119 (33.61%), Postives = 62/119 (52.10%), Query Frame = 2
Query: 62 KNDTISMADLALTLVSTCHPREMPVFLARVQAIQKKRKQIPLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAVTSTDFARAAKVISGKELSPECVWLVFKMFDRGADGRLEHDELIE 418
K ++S+ D ALTL+S P ++P +L RVQA+ + + D H ++ + D++ AL + + DF RA +V SG ELS V L F++FD A G L EL++
Sbjct: 305 KQQSMSVHDFALTLISCFDPEKLPPYLERVQALTESDGAVTWDDFFTFHFNVQSNLTDIKAALELIGVDE----IKEADFTRAVRVASGTELSSPVVRLAFRIFDENASGTLNQSELLK 419
BLAST of mRNA_E_fasciculatus_S2_contig7546.15710.1 vs.
Match: Uncharacterized (protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGG9_BRELC) HSP 1 Score: 67.8 bits (164), Expect = 1.500e-10 Identity = 39/119 (32.77%), Postives = 65/119 (54.62%), Query Frame = 2
Query: 62 KNDTISMADLALTLVSTCHPREMPVFLARVQAIQKKRKQIPLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAVTSTDFARAAKVISGKELSPECVWLVFKMFDRGADGRLEHDELIE 418
K T+S+ D ALTL+S P+++P +L RVQA+ + + H ++ + D++ A + + +T +F RAA+++SG ELS V L F++FD +G L+ EL E
Sbjct: 276 KQQTVSVHDFALTLISGHDPKKLPPYLDRVQALNACDDVVTWDEFCTFHFNVQHNLPDIKLAFEL----TGADEITEAEFIRAARIVSGVELSSPVVELAFRIFDENGNGTLDRSELFE 390
BLAST of mRNA_E_fasciculatus_S2_contig7546.15710.1 vs.
Match: EF-hand (domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XI39_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 2.820e-10 Identity = 39/122 (31.97%), Postives = 66/122 (54.10%), Query Frame = 2
Query: 53 SRYKNDTISMADLALTLVSTCHPREMPVFLARVQAIQKKRKQIPLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAVTSTDFARAAKVISGKELSPECVWLVFKMFDRGADGRLEHDELIE 418
S + +S+ D A+TLVS P + +L R+QA+ ++ + D H ++ + +D++ A + A +T DF RAA+V+SG ELS V L F++FD +G L+ EL++
Sbjct: 286 SAKHQEVVSVHDFAITLVSCFDPERLAPYLERLQALNASQELVTWDDFYKFHFNVQSNLEDIKLAFDLIGAAE----ITEADFIRAARVVSGVELSFPVVQLAFRVFDGNDNGTLDQTELLK 403
BLAST of mRNA_E_fasciculatus_S2_contig7546.15710.1 vs.
Match: EF-hand (domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C250_HYAAE) HSP 1 Score: 63.9 bits (154), Expect = 3.420e-9 Identity = 43/119 (36.13%), Postives = 64/119 (53.78%), Query Frame = 2
Query: 62 KNDTISMADLALTLVSTCHPREMPVFLARVQAIQKKRKQIPLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAVTSTDFARAAKVISGKELSPECVWLVFKMFDRGADGRLEHDELIE 418
K T+S+ D ALTL+S P ++P FL RVQA+ + + H + ++ D++ A + +KA +T DF RAA ++SG ELS V L F +F ADG L+ EL +
Sbjct: 317 KQQTMSVHDFALTLISHLDPDQLPPFLERVQALNASHGVVLWAEFCAFHFTVRNYLPDIKLAFEL-TKAQ---VITEADFIRAAHIVSGVELSFPVVQLAFHIF-YNADGALDRSELFK 430
BLAST of mRNA_E_fasciculatus_S2_contig7546.15710.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZW7_PYTIN) HSP 1 Score: 63.2 bits (152), Expect = 6.350e-9 Identity = 38/115 (33.04%), Postives = 61/115 (53.04%), Query Frame = 2
Query: 74 ISMADLALTLVSTCHPREMPVFLARVQAIQKKRKQIPLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAVTSTDFARAAKVISGKELSPECVWLVFKMFDRGADGRLEHDELIE 418
IS+ D A+TLVS P + +L RV+A+ + + D H ++++ D+ A + +T DF RAA+V+SG ELS V L F++FD +G L+ EL++
Sbjct: 320 ISVHDFAITLVSGFDPDRLAPYLERVEALNASEELVTWEDFYKFHANVQNNLADIXLAFDLTHAEE----ITEADFIRAARVVSGVELSFPVVQLAFRVFDSNENGTLDQSELLK 430
BLAST of mRNA_E_fasciculatus_S2_contig7546.15710.1 vs.
Match: EF-hand (domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NKW5_PHYIT) HSP 1 Score: 60.5 bits (145), Expect = 5.540e-8 Identity = 38/112 (33.93%), Postives = 60/112 (53.57%), Query Frame = 2
Query: 62 KNDTISMADLALTLVSTCHPREMPVFLARVQAIQKKRKQIPLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAVTSTDFARAAKVISGKELSPECVWLVFKMFDRGADGRL 397
+ T+S+ D ALTLVS P ++P +L RV + + + + H ++ + D++ A + + +T DF RAA+V+SG ELS V L F++FD DGRL
Sbjct: 298 QQQTMSVHDFALTLVSCFDPEKLPPYLDRVHELNASEGVVTWDEFFMFHFNVQSNLPDIKLAFEL----TGADEITEADFIRAARVVSGVELSSPVVQLAFRIFDE--DGRL 403
BLAST of mRNA_E_fasciculatus_S2_contig7546.15710.1 vs.
Match: EF-hand (domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2HK38_PHYPR) HSP 1 Score: 58.5 bits (140), Expect = 2.620e-7 Identity = 38/109 (34.86%), Postives = 59/109 (54.13%), Query Frame = 2
Query: 71 TISMADLALTLVSTCHPREMPVFLARVQAIQKKRKQIPLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAVTSTDFARAAKVISGKELSPECVWLVFKMFDRGADGRL 397
T+S+ D ALTL+S P ++P +L RVQA+ + + H ++ + D++ A + + +T DF RAA V+SG ELS V L F++FD DG+L
Sbjct: 323 TMSVHDFALTLISCFDPEKLPPYLDRVQALNASDGVVTWDEFFEFHFNVQSNLPDIKLAFEL----TGADEITEADFIRAAHVVSGVELSSPVVQLAFRIFDE--DGKL 425 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7546.15710.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7546.15710.1 >prot_E_fasciculatus_S2_contig7546.15710.1 ID=prot_E_fasciculatus_S2_contig7546.15710.1|Name=mRNA_E_fasciculatus_S2_contig7546.15710.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=140bp GGRQGRRRRRGRRCGVVEPVQERHHLDGRPRAHPGLHVPPERDAGVLGEGback to top mRNA from alignment at E_fasciculatus_S2_contig7546:1428..3865+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7546.15710.1 ID=mRNA_E_fasciculatus_S2_contig7546.15710.1|Name=mRNA_E_fasciculatus_S2_contig7546.15710.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2438bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7546:1428..3865+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7546:1428..3865+ >mRNA_E_fasciculatus_S2_contig7546.15710.1 ID=mRNA_E_fasciculatus_S2_contig7546.15710.1|Name=mRNA_E_fasciculatus_S2_contig7546.15710.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=420bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7546:1428..3865+ (Ectocarpus fasciculatus EfasUO2)back to top |