mRNA_E_fasciculatus_S2_contig7545.15709.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7545.15709.1 vs.
Match: MFS (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7G6_9PHAE) HSP 1 Score: 571 bits (1472), Expect = 2.490e-199 Identity = 298/311 (95.82%), Postives = 298/311 (95.82%), Query Frame = 1
Query: 1 PAMGAYIALHHGNEAVFLCSVLLIGIDLVFIAVYLPESLGAGEELEFEGAXXXXXXX-LRKELQRSRTASYGGGDALGAFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDTIDDDDSGLLLGTFGKDLPEAGEGAEEMVALLASD 930
PAMGAYIALHHGN AVFLCSVLLIGIDLVFIAVYLPESLGAGEELEFEGA LRKELQRSRTASYGGGDALGAFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVF SMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDT LPGCPYLIAAVVCLAALLLSYEIPD IDDDDSGLLLGTFGKDLPE GEGAEEMVALLASD
Sbjct: 158 PAMGAYIALHHGNGAVFLCSVLLIGIDLVFIAVYLPESLGAGEELEFEGAGGEEAGGGLRKELQRSRTASYGGGDALGAFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFLSMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTLLPGCPYLIAAVVCLAALLLSYEIPDAIDDDDSGLLLGTFGKDLPEGGEGAEEMVALLASD 468
BLAST of mRNA_E_fasciculatus_S2_contig7545.15709.1 vs.
Match: Hippocampus (abundant transcript 1 protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ60_9STRA) HSP 1 Score: 308 bits (790), Expect = 1.230e-96 Identity = 180/323 (55.73%), Postives = 214/323 (66.25%), Query Frame = 1
Query: 1 PAMGAYIALHHGNEAVFLCSVLLIGIDLVFIAVYLPESLGA--GEEL--------EFEGAXXXXXXXLRKELQRSRTASYGGGDALG--AFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDTIDDDDSGLLLGTFGKDLPEAGEGAEEMVALLASDD 933
P G Y+A G AVF S+ L+ ID+ +I + LPES+ G L +G + L+R GG+ FQWNPLASL+AF GNPLL A I LYYT VWAVVSTLMVYV R+F F V +GQLL FG CTMFAEGVLVR++VP LGEKLT+Q+GLLGF AQCV++GLA S +M+FASMGGSLLSNLVYP++SSL+SRSV+T+ QGEVLG INGVRALTEGFGPL+F L E T LPG PYLIA V + AL+ S+ IPD DD L +GTFG D G A E+ LLA+DD
Sbjct: 143 PVAGGYLAHEVGAIAVFASSIALVAIDIAYILLVLPESVAPRRGGALPPPALATPRGKGGGGGIAVPIPAILRRGTPGELVGGEGTEYLPFQWNPLASLRAFDGNPLLHRVAVIVFLYYTGVWAVVSTLMVYVTRKFAFDAVTVGQLLGMFGACTMFAEGVLVRYLVPWLGEKLTMQLGLLGFTAQCVMIGLADSPYMIFASMGGSLLSNLVYPAMSSLVSRSVSTAAQGEVLGTINGVRALTEGFGPLIFGALMSQFEGTLLPGAPYLIAGGVSVGALVYSFGIPDETDD---ALCVGTFGADSD--GFAAVELQPLLAADD 460
BLAST of mRNA_E_fasciculatus_S2_contig7545.15709.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3A0Z0_HETAK) HSP 1 Score: 254 bits (650), Expect = 4.980e-76 Identity = 145/311 (46.62%), Postives = 192/311 (61.74%), Query Frame = 1
Query: 1 PAMGAYIALHHGNEAVFLCSVLLIGIDLVFIAVYLPESLGAGEELEFEGAXXXXXXXLRKELQRSRTASYGGGDALGAFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDTIDDDDSGLLLGTFGKDLPEAGEGAEEMVALLASDD 933
PA G ++A G +AVF + LL+ +DL +IAV LPES G+ L KE + +NPL +LK F G+ L A +T LYY VWA+VSTLM+YV RQF F P+ IG L+S+FGVCTMF+EG+LVR+MVP GE+LTLQ+GLLGF+ +CV++GLA WM+++ M S+ SNLVYPS+SSL+SR V +QGE LGA+NGV+ALTEGFGPLLF L E T +PG PYL+AA AL+ S+ +P+ D G + E A E+V LL+ ++
Sbjct: 161 PAAGGFLARVFGAQAVFATTFLLVLVDLAYIAVLLPES-NPGQIQPLFRVNSRKRFDLNKEQLPT--------------DFNPLETLKVFKGDYFLSRVAVVTFLYYIGVWALVSTLMIYVTRQFHFTPLMIGYLMSSFGVCTMFSEGILVRYMVPMFGERLTLQLGLLGFSMKCVIIGLASQAWMIYSVMLVSVFSNLVYPSLSSLVSRGVGAGRQGEALGALNGVKALTEGFGPLLFGHLLAAFEGTVVPGAPYLVAAAFAAGALVTSFALPE-----DPDAAAGAWAARHTEDAADALELVNLLSGEE 451
BLAST of mRNA_E_fasciculatus_S2_contig7545.15709.1 vs.
Match: Hypothetical (protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVJ1_9STRA) HSP 1 Score: 240 bits (612), Expect = 6.150e-73 Identity = 124/197 (62.94%), Postives = 151/197 (76.65%), Query Frame = 1
Query: 235 FQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPD 825
FQ NPL +LK FS + LL A I LYYT VWA+VSTLM+YV RQF F + +GQLLSAFGVCTMFAEGVLVR MVP+LGE+LTLQIGLLGFA QC+ +GLA W+++ SM S+LSNLVYP++SS++SR V ++ G LGA+NGV+ALTEGFGPL F L + EDT LPG PYLIAA+ + ALL SY + +
Sbjct: 26 FQMNPLETLKVFSRSHLLFRVAIIVFLYYTGVWAIVSTLMIYVTRQFAFTQMMVGQLLSAFGVCTMFAEGVLVRIMVPRLGERLTLQIGLLGFACQCITIGLAKDTWVLYLSMLFSVLSNLVYPALSSMVSRGVGPNQVGVALGAMNGVKALTEGFGPLCFGALLFQFEDTRLPGAPYLIAAMFAIGALLASYSLKE 222
BLAST of mRNA_E_fasciculatus_S2_contig7545.15709.1 vs.
Match: MFS (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9X9_9STRA) HSP 1 Score: 225 bits (573), Expect = 1.090e-63 Identity = 129/274 (47.08%), Postives = 169/274 (61.68%), Query Frame = 1
Query: 1 PAMGAYIALHHGNEAVFLCSVLLIGIDLVFIAVYLPESLGAGEELEFEGAXXXXXXXLRKELQRSRTASYGGGDALGAFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIP 822
P +G ++A AVF SV L+ + + +I V LPES ++ R+ ++ D L W+P + L+ FSG PLL++ +KI LYYT VWA+VSTLMV+V R F V +G+L+SAFGVCTM +EGVLVR MVP GEK +QIGL FA QC A V S+ S L+NLVYP++SSL+SRSV SKQGE LGA+NG+RALTEGFGPLLF L + +DT PG PYL+A+ +AALL + ++P
Sbjct: 198 PILGGFLAERFSYRAVFAVSVALVVLAVAYIVVILPESRSTEQQ------------RCRRGIRLLAAGMPPPEDYL-PMSWSPFSVLEVFSGEPLLRSVSKIVFLYYTGVWAIVSTLMVHVQRSFHADEVTLGELMSAFGVCTMLSEGVLVRLMVPHFGEKGAMQIGLAAFALQCAFFSFARHIHDVLFSLLFSTLANLVYPAVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLLFGSLMFLCQDTRAPGAPYLLASACSVAALLQTNKLP 458
BLAST of mRNA_E_fasciculatus_S2_contig7545.15709.1 vs.
Match: Hypothetical (protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C6V0_9STRA) HSP 1 Score: 212 bits (540), Expect = 3.510e-59 Identity = 121/269 (44.98%), Postives = 165/269 (61.34%), Query Frame = 1
Query: 34 GNEAVFLCSVLLIGIDLVFIAVYLPESLGAGEELEFEGAXXXXXXXLRKELQRSRTASYGGGDALGAFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDTIDDD 840
G + VF+ S++L +DL +I LPES + EG E R D + W PL +L+ FSG+PLL +I LLYYT VWA+VST ++Y A++F FGP ++G+L+SAFG+CTM AE VLVR +VP +GE ++Q GL+ FA QC +L A W +F + S ++NLVYPS++SLIS VA GE LGAINGV+ALTEG GPLLF L +E++ PG PYL+A++ L AL + +P D+D
Sbjct: 198 GAKLVFIASLVLTILDLAYIWFILPESTDISLP-QPEGKAKIRRNLSNLESWRD--------DVIPNLNWTPLDALRIFSGDPLLAEIGRIVLLYYTGVWAIVSTFVLYAAKRFHFGPERLGELMSAFGLCTMVAEAVLVRIIVPAVGEIRSMQYGLIAFALQCAVLAFAFEGWQLFLCVFLSTMTNLVYPSLTSLISHVVADDAVGEALGAINGVKALTEGIGPLLFGGLMTLSENSRFPGWPYLLASMFSLLALARTRHLPTGSDND 457
BLAST of mRNA_E_fasciculatus_S2_contig7545.15709.1 vs.
Match: MFS (domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPM2_FISSO) HSP 1 Score: 204 bits (519), Expect = 4.760e-56 Identity = 117/280 (41.79%), Postives = 163/280 (58.21%), Query Frame = 1
Query: 1 PAMGAYIALHHGNEAVFLCSVLLIGIDLVFIAVYLPESLGAGEELEFEGAXXXXXXXLRKELQRSRTASYGGGDALGAFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDTIDDD 840
P +G Y+A + VFL S+LL +DL +I LPES ++ A L S W P SL+ + +P L+ ++ LYY +WA++STL VY ++F P ++G+L+SA G+ TM AE VLVR+MVP LGEK +++GL+ F QCV+LG A W +F SLL NLVYPS+SSL+S SV GE LGAING++ALTEG GPL+F L +E + LPG PYL+A+++ AA ++ E+PD +DD
Sbjct: 225 PIVGGYLA-QQNKQYVFLTSLLLTVVDLAYIYFILPESRSI--DVPSSAASTISLMTLDHNFSSS---------------WKPWDSLRLIATDPFLRKVGEVAFLYYIGLWAIISTLSVYAVKRFHLTPERLGELMSALGLSTMLAEAVLVRFMVPWLGEKKAMKVGLVSFGLQCVVLGFATEGWHLFVCAMFSLLGNLVYPSLSSLVSGSVEPDAVGEALGAINGIKALTEGIGPLVFGSLMTLSEASPLPGWPYLLASLLVFAAYRVADELPDLEEDD 486
BLAST of mRNA_E_fasciculatus_S2_contig7545.15709.1 vs.
Match: MFS (general substrate transporter (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRL6_9STRA) HSP 1 Score: 199 bits (507), Expect = 1.350e-55 Identity = 108/276 (39.13%), Postives = 161/276 (58.33%), Query Frame = 1
Query: 1 PAMGAYIALHHGNEAVFLCSVLLIGIDLVFIAVYLPESLGAGEEL--EFEGAXXXXXXXLRKELQRSRTASYGGGDALGAFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIP 822
P G Y+A + + VF CS++L +DL++I + LPES+ +L + EG + W+P S++ +P L+ ++ YYT +WAV+STL +Y + F+ P +G+L+S G+ TM AE +L+RW+VP LGEK T+++GL+ F QC++LG A+ W +F +G SLL NLVYPS+SSL+S V K GE LGAING++ALTEG GPL F L ++E T PG PY +A ++ A L+ ++P
Sbjct: 147 PMAGGYLA-NSKTDYVFQCSLVLTLLDLLYIYMILPESISPRIDLFTKMEGIAN-------------------------SISWSPWDSIRLVLHDPFLRKIGQVAFFYYTGLWAVLSTLSLYAVQHFKMTPQVLGELMSCLGLSTMVAEAILIRWLVPMLGEKQTIRVGLISFGLQCIVLGAANEPWQLFLCVGLSLLGNLVYPSLSSLVSGIVEPKKVGEALGAINGIKALTEGIGPLFFGTLMTFSEGTAFPGSPYWLAGILVFVAYHLADKLP 396
BLAST of mRNA_E_fasciculatus_S2_contig7545.15709.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MB15_9STRA) HSP 1 Score: 195 bits (496), Expect = 1.320e-53 Identity = 118/312 (37.82%), Postives = 184/312 (58.97%), Query Frame = 1
Query: 1 PAMGAYIALHHGNEAVFLCSVLLIGIDLVFIAVYLPES--LGAGEELEFEGAXXXXXXXLRKELQRSRTASYGGGDALGAFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDTIDDDDSGLLLGTFGKDLPEAGEGAEEMVALLASD 930
P G+YIA G ++VFL ++LL+ ++++I + LPE+ L EE +E + + S W + K FS +P + A I +YYT+VWA+VSTLMVY+ R F P+++G LLSA+G+ TMF+EG+LVR +VP++GE ++++GL+ F+ QC+L+ ++ + +F S+ S+ +NL YP++SSL+S+ V+ QGE LGA+NG++ALTEGFGPL F L E + PG P+++A ++ L A L +E+P + D L L K G EE + LL +D
Sbjct: 149 PIAGSYIAADFGEQSVFLMALLLVLANVMYIVLKLPETAKLVNSEEQAYE-----KFGVAMEYIPNS---------------WKFAETFKIFSADPFMWNLATIVFIYYTAVWAIVSTLMVYITRHLAFSPLQLGWLLSAYGLATMFSEGILVRIIVPRIGELNSMRLGLIAFSLQCLLVAVSTNPGWIFLSVLFSMGANLFYPAVSSLVSKVVSEDSQGEALGALNGIKALTEGFGPLFFGGLMSLFEHSSQPGAPFILATMLSLWAFLHCFELPP--EGDMYTLKLDAHRK-------GREEGMGLLYND 431
BLAST of mRNA_E_fasciculatus_S2_contig7545.15709.1 vs.
Match: Hypothetical (protein n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UG73_9STRA) HSP 1 Score: 196 bits (499), Expect = 5.220e-53 Identity = 120/289 (41.52%), Postives = 169/289 (58.48%), Query Frame = 1
Query: 46 VFLCSVLLIGIDLVFIAVYLPESLGAGEE-------------LEFEGAXXXXXXXLRKELQRSRTA----SYGGGDA-------LGAFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDTIDDD 840
VF+ +VLL IDL++I LPE+ G E + A +R+ R A S G GD +G + +A L + PLL+ ++I LYY VWA+VSTLMVYV RQ F V +GQL+SA+G+CTM +EGVLVR MVP GE +GL GFA QCV++ A ++++ SM G+L +NL YPSIS+LISR+V+ ++QGE LGA+NG+++L EG GPL+F L +E+T +PG PYL+AA A + ++P ++ D
Sbjct: 170 VFMGTVLLTAIDLLYIVYVLPETCGEHREERMGLAFPHSPAPFKLRDAYSGLRRGVRQVRSRVEDAWLGLSAGAGDVAHSLPTRMGLVLGDAVAILLS---TPLLRRVSEIVFLYYCGVWALVSTLMVYVTRQLGFTTVMVGQLMSAYGLCTMISEGVLVRIMVPLFGEPFCAVLGLAGFALQCVIIAFADRPFVMYLSMVGALFANLFYPSISALISRTVSPAQQGEALGALNGIKSLCEGVGPLVFGTLMTASENTAMPGAPYLVAAAAAAVAGWHALDLPKLVEAD 455 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7545.15709.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7545.15709.1 >prot_E_fasciculatus_S2_contig7545.15709.1 ID=prot_E_fasciculatus_S2_contig7545.15709.1|Name=mRNA_E_fasciculatus_S2_contig7545.15709.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=339bp MGAYIALHHGNEAVFLCSVLLIGIDLVFIAVYLPESLGAGEELEFEGAGGback to top mRNA from alignment at E_fasciculatus_S2_contig7545:4164..7362- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7545.15709.1 ID=mRNA_E_fasciculatus_S2_contig7545.15709.1|Name=mRNA_E_fasciculatus_S2_contig7545.15709.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3199bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7545:4164..7362- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7545:4164..7362- >mRNA_E_fasciculatus_S2_contig7545.15709.1 ID=mRNA_E_fasciculatus_S2_contig7545.15709.1|Name=mRNA_E_fasciculatus_S2_contig7545.15709.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1017bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7545:4164..7362- (Ectocarpus fasciculatus EfasUO2)back to top |