mRNA_E_fasciculatus_S2_contig7545.15709.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7545.15709.1
Unique NamemRNA_E_fasciculatus_S2_contig7545.15709.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7545.15709.1 vs.
Match: MFS (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7G6_9PHAE)

HSP 1 Score: 571 bits (1472), Expect = 2.490e-199
Identity = 298/311 (95.82%), Postives = 298/311 (95.82%), Query Frame = 1
Query:    1 PAMGAYIALHHGNEAVFLCSVLLIGIDLVFIAVYLPESLGAGEELEFEGAXXXXXXX-LRKELQRSRTASYGGGDALGAFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDTIDDDDSGLLLGTFGKDLPEAGEGAEEMVALLASD 930
            PAMGAYIALHHGN AVFLCSVLLIGIDLVFIAVYLPESLGAGEELEFEGA        LRKELQRSRTASYGGGDALGAFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVF SMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDT LPGCPYLIAAVVCLAALLLSYEIPD IDDDDSGLLLGTFGKDLPE GEGAEEMVALLASD
Sbjct:  158 PAMGAYIALHHGNGAVFLCSVLLIGIDLVFIAVYLPESLGAGEELEFEGAGGEEAGGGLRKELQRSRTASYGGGDALGAFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFLSMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTLLPGCPYLIAAVVCLAALLLSYEIPDAIDDDDSGLLLGTFGKDLPEGGEGAEEMVALLASD 468          
BLAST of mRNA_E_fasciculatus_S2_contig7545.15709.1 vs.
Match: Hippocampus (abundant transcript 1 protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ60_9STRA)

HSP 1 Score: 308 bits (790), Expect = 1.230e-96
Identity = 180/323 (55.73%), Postives = 214/323 (66.25%), Query Frame = 1
Query:    1 PAMGAYIALHHGNEAVFLCSVLLIGIDLVFIAVYLPESLGA--GEEL--------EFEGAXXXXXXXLRKELQRSRTASYGGGDALG--AFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDTIDDDDSGLLLGTFGKDLPEAGEGAEEMVALLASDD 933
            P  G Y+A   G  AVF  S+ L+ ID+ +I + LPES+    G  L          +G        +   L+R       GG+      FQWNPLASL+AF GNPLL   A I  LYYT VWAVVSTLMVYV R+F F  V +GQLL  FG CTMFAEGVLVR++VP LGEKLT+Q+GLLGF AQCV++GLA S +M+FASMGGSLLSNLVYP++SSL+SRSV+T+ QGEVLG INGVRALTEGFGPL+F  L    E T LPG PYLIA  V + AL+ S+ IPD  DD    L +GTFG D    G  A E+  LLA+DD
Sbjct:  143 PVAGGYLAHEVGAIAVFASSIALVAIDIAYILLVLPESVAPRRGGALPPPALATPRGKGGGGGIAVPIPAILRRGTPGELVGGEGTEYLPFQWNPLASLRAFDGNPLLHRVAVIVFLYYTGVWAVVSTLMVYVTRKFAFDAVTVGQLLGMFGACTMFAEGVLVRYLVPWLGEKLTMQLGLLGFTAQCVMIGLADSPYMIFASMGGSLLSNLVYPAMSSLVSRSVSTAAQGEVLGTINGVRALTEGFGPLIFGALMSQFEGTLLPGAPYLIAGGVSVGALVYSFGIPDETDD---ALCVGTFGADSD--GFAAVELQPLLAADD 460          
BLAST of mRNA_E_fasciculatus_S2_contig7545.15709.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3A0Z0_HETAK)

HSP 1 Score: 254 bits (650), Expect = 4.980e-76
Identity = 145/311 (46.62%), Postives = 192/311 (61.74%), Query Frame = 1
Query:    1 PAMGAYIALHHGNEAVFLCSVLLIGIDLVFIAVYLPESLGAGEELEFEGAXXXXXXXLRKELQRSRTASYGGGDALGAFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDTIDDDDSGLLLGTFGKDLPEAGEGAEEMVALLASDD 933
            PA G ++A   G +AVF  + LL+ +DL +IAV LPES   G+              L KE   +               +NPL +LK F G+  L   A +T LYY  VWA+VSTLM+YV RQF F P+ IG L+S+FGVCTMF+EG+LVR+MVP  GE+LTLQ+GLLGF+ +CV++GLA   WM+++ M  S+ SNLVYPS+SSL+SR V   +QGE LGA+NGV+ALTEGFGPLLF  L    E T +PG PYL+AA     AL+ S+ +P+     D     G +     E    A E+V LL+ ++
Sbjct:  161 PAAGGFLARVFGAQAVFATTFLLVLVDLAYIAVLLPES-NPGQIQPLFRVNSRKRFDLNKEQLPT--------------DFNPLETLKVFKGDYFLSRVAVVTFLYYIGVWALVSTLMIYVTRQFHFTPLMIGYLMSSFGVCTMFSEGILVRYMVPMFGERLTLQLGLLGFSMKCVIIGLASQAWMIYSVMLVSVFSNLVYPSLSSLVSRGVGAGRQGEALGALNGVKALTEGFGPLLFGHLLAAFEGTVVPGAPYLVAAAFAAGALVTSFALPE-----DPDAAAGAWAARHTEDAADALELVNLLSGEE 451          
BLAST of mRNA_E_fasciculatus_S2_contig7545.15709.1 vs.
Match: Hypothetical (protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVJ1_9STRA)

HSP 1 Score: 240 bits (612), Expect = 6.150e-73
Identity = 124/197 (62.94%), Postives = 151/197 (76.65%), Query Frame = 1
Query:  235 FQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPD 825
            FQ NPL +LK FS + LL   A I  LYYT VWA+VSTLM+YV RQF F  + +GQLLSAFGVCTMFAEGVLVR MVP+LGE+LTLQIGLLGFA QC+ +GLA   W+++ SM  S+LSNLVYP++SS++SR V  ++ G  LGA+NGV+ALTEGFGPL F  L +  EDT LPG PYLIAA+  + ALL SY + +
Sbjct:   26 FQMNPLETLKVFSRSHLLFRVAIIVFLYYTGVWAIVSTLMIYVTRQFAFTQMMVGQLLSAFGVCTMFAEGVLVRIMVPRLGERLTLQIGLLGFACQCITIGLAKDTWVLYLSMLFSVLSNLVYPALSSMVSRGVGPNQVGVALGAMNGVKALTEGFGPLCFGALLFQFEDTRLPGAPYLIAAMFAIGALLASYSLKE 222          
BLAST of mRNA_E_fasciculatus_S2_contig7545.15709.1 vs.
Match: MFS (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9X9_9STRA)

HSP 1 Score: 225 bits (573), Expect = 1.090e-63
Identity = 129/274 (47.08%), Postives = 169/274 (61.68%), Query Frame = 1
Query:    1 PAMGAYIALHHGNEAVFLCSVLLIGIDLVFIAVYLPESLGAGEELEFEGAXXXXXXXLRKELQRSRTASYGGGDALGAFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIP 822
            P +G ++A      AVF  SV L+ + + +I V LPES    ++              R+ ++          D L    W+P + L+ FSG PLL++ +KI  LYYT VWA+VSTLMV+V R F    V +G+L+SAFGVCTM +EGVLVR MVP  GEK  +QIGL  FA QC     A     V  S+  S L+NLVYP++SSL+SRSV  SKQGE LGA+NG+RALTEGFGPLLF  L +  +DT  PG PYL+A+   +AALL + ++P
Sbjct:  198 PILGGFLAERFSYRAVFAVSVALVVLAVAYIVVILPESRSTEQQ------------RCRRGIRLLAAGMPPPEDYL-PMSWSPFSVLEVFSGEPLLRSVSKIVFLYYTGVWAIVSTLMVHVQRSFHADEVTLGELMSAFGVCTMLSEGVLVRLMVPHFGEKGAMQIGLAAFALQCAFFSFARHIHDVLFSLLFSTLANLVYPAVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLLFGSLMFLCQDTRAPGAPYLLASACSVAALLQTNKLP 458          
BLAST of mRNA_E_fasciculatus_S2_contig7545.15709.1 vs.
Match: Hypothetical (protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C6V0_9STRA)

HSP 1 Score: 212 bits (540), Expect = 3.510e-59
Identity = 121/269 (44.98%), Postives = 165/269 (61.34%), Query Frame = 1
Query:   34 GNEAVFLCSVLLIGIDLVFIAVYLPESLGAGEELEFEGAXXXXXXXLRKELQRSRTASYGGGDALGAFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDTIDDD 840
            G + VF+ S++L  +DL +I   LPES       + EG           E  R         D +    W PL +L+ FSG+PLL    +I LLYYT VWA+VST ++Y A++F FGP ++G+L+SAFG+CTM AE VLVR +VP +GE  ++Q GL+ FA QC +L  A   W +F  +  S ++NLVYPS++SLIS  VA    GE LGAINGV+ALTEG GPLLF  L   +E++  PG PYL+A++  L AL  +  +P   D+D
Sbjct:  198 GAKLVFIASLVLTILDLAYIWFILPESTDISLP-QPEGKAKIRRNLSNLESWRD--------DVIPNLNWTPLDALRIFSGDPLLAEIGRIVLLYYTGVWAIVSTFVLYAAKRFHFGPERLGELMSAFGLCTMVAEAVLVRIIVPAVGEIRSMQYGLIAFALQCAVLAFAFEGWQLFLCVFLSTMTNLVYPSLTSLISHVVADDAVGEALGAINGVKALTEGIGPLLFGGLMTLSENSRFPGWPYLLASMFSLLALARTRHLPTGSDND 457          
BLAST of mRNA_E_fasciculatus_S2_contig7545.15709.1 vs.
Match: MFS (domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPM2_FISSO)

HSP 1 Score: 204 bits (519), Expect = 4.760e-56
Identity = 117/280 (41.79%), Postives = 163/280 (58.21%), Query Frame = 1
Query:    1 PAMGAYIALHHGNEAVFLCSVLLIGIDLVFIAVYLPESLGAGEELEFEGAXXXXXXXLRKELQRSRTASYGGGDALGAFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDTIDDD 840
            P +G Y+A     + VFL S+LL  +DL +I   LPES     ++    A       L      S               W P  SL+  + +P L+   ++  LYY  +WA++STL VY  ++F   P ++G+L+SA G+ TM AE VLVR+MVP LGEK  +++GL+ F  QCV+LG A   W +F     SLL NLVYPS+SSL+S SV     GE LGAING++ALTEG GPL+F  L   +E + LPG PYL+A+++  AA  ++ E+PD  +DD
Sbjct:  225 PIVGGYLA-QQNKQYVFLTSLLLTVVDLAYIYFILPESRSI--DVPSSAASTISLMTLDHNFSSS---------------WKPWDSLRLIATDPFLRKVGEVAFLYYIGLWAIISTLSVYAVKRFHLTPERLGELMSALGLSTMLAEAVLVRFMVPWLGEKKAMKVGLVSFGLQCVVLGFATEGWHLFVCAMFSLLGNLVYPSLSSLVSGSVEPDAVGEALGAINGIKALTEGIGPLVFGSLMTLSEASPLPGWPYLLASLLVFAAYRVADELPDLEEDD 486          
BLAST of mRNA_E_fasciculatus_S2_contig7545.15709.1 vs.
Match: MFS (general substrate transporter (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRL6_9STRA)

HSP 1 Score: 199 bits (507), Expect = 1.350e-55
Identity = 108/276 (39.13%), Postives = 161/276 (58.33%), Query Frame = 1
Query:    1 PAMGAYIALHHGNEAVFLCSVLLIGIDLVFIAVYLPESLGAGEEL--EFEGAXXXXXXXLRKELQRSRTASYGGGDALGAFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIP 822
            P  G Y+A +   + VF CS++L  +DL++I + LPES+    +L  + EG                            +  W+P  S++    +P L+   ++   YYT +WAV+STL +Y  + F+  P  +G+L+S  G+ TM AE +L+RW+VP LGEK T+++GL+ F  QC++LG A+  W +F  +G SLL NLVYPS+SSL+S  V   K GE LGAING++ALTEG GPL F  L  ++E T  PG PY +A ++   A  L+ ++P
Sbjct:  147 PMAGGYLA-NSKTDYVFQCSLVLTLLDLLYIYMILPESISPRIDLFTKMEGIAN-------------------------SISWSPWDSIRLVLHDPFLRKIGQVAFFYYTGLWAVLSTLSLYAVQHFKMTPQVLGELMSCLGLSTMVAEAILIRWLVPMLGEKQTIRVGLISFGLQCIVLGAANEPWQLFLCVGLSLLGNLVYPSLSSLVSGIVEPKKVGEALGAINGIKALTEGIGPLFFGTLMTFSEGTAFPGSPYWLAGILVFVAYHLADKLP 396          
BLAST of mRNA_E_fasciculatus_S2_contig7545.15709.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MB15_9STRA)

HSP 1 Score: 195 bits (496), Expect = 1.320e-53
Identity = 118/312 (37.82%), Postives = 184/312 (58.97%), Query Frame = 1
Query:    1 PAMGAYIALHHGNEAVFLCSVLLIGIDLVFIAVYLPES--LGAGEELEFEGAXXXXXXXLRKELQRSRTASYGGGDALGAFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDTIDDDDSGLLLGTFGKDLPEAGEGAEEMVALLASD 930
            P  G+YIA   G ++VFL ++LL+  ++++I + LPE+  L   EE  +E           + +  S               W    + K FS +P +   A I  +YYT+VWA+VSTLMVY+ R   F P+++G LLSA+G+ TMF+EG+LVR +VP++GE  ++++GL+ F+ QC+L+ ++ +   +F S+  S+ +NL YP++SSL+S+ V+   QGE LGA+NG++ALTEGFGPL F  L    E +  PG P+++A ++ L A L  +E+P   + D   L L    K       G EE + LL +D
Sbjct:  149 PIAGSYIAADFGEQSVFLMALLLVLANVMYIVLKLPETAKLVNSEEQAYE-----KFGVAMEYIPNS---------------WKFAETFKIFSADPFMWNLATIVFIYYTAVWAIVSTLMVYITRHLAFSPLQLGWLLSAYGLATMFSEGILVRIIVPRIGELNSMRLGLIAFSLQCLLVAVSTNPGWIFLSVLFSMGANLFYPAVSSLVSKVVSEDSQGEALGALNGIKALTEGFGPLFFGGLMSLFEHSSQPGAPFILATMLSLWAFLHCFELPP--EGDMYTLKLDAHRK-------GREEGMGLLYND 431          
BLAST of mRNA_E_fasciculatus_S2_contig7545.15709.1 vs.
Match: Hypothetical (protein n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UG73_9STRA)

HSP 1 Score: 196 bits (499), Expect = 5.220e-53
Identity = 120/289 (41.52%), Postives = 169/289 (58.48%), Query Frame = 1
Query:   46 VFLCSVLLIGIDLVFIAVYLPESLGAGEE-------------LEFEGAXXXXXXXLRKELQRSRTA----SYGGGDA-------LGAFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIPDTIDDD 840
            VF+ +VLL  IDL++I   LPE+ G   E              +   A       +R+   R   A    S G GD        +G    + +A L +    PLL+  ++I  LYY  VWA+VSTLMVYV RQ  F  V +GQL+SA+G+CTM +EGVLVR MVP  GE     +GL GFA QCV++  A   ++++ SM G+L +NL YPSIS+LISR+V+ ++QGE LGA+NG+++L EG GPL+F  L   +E+T +PG PYL+AA     A   + ++P  ++ D
Sbjct:  170 VFMGTVLLTAIDLLYIVYVLPETCGEHREERMGLAFPHSPAPFKLRDAYSGLRRGVRQVRSRVEDAWLGLSAGAGDVAHSLPTRMGLVLGDAVAILLS---TPLLRRVSEIVFLYYCGVWALVSTLMVYVTRQLGFTTVMVGQLMSAYGLCTMISEGVLVRIMVPLFGEPFCAVLGLAGFALQCVIIAFADRPFVMYLSMVGALFANLFYPSISALISRTVSPAQQGEALGALNGIKSLCEGVGPLVFGTLMTASENTAMPGAPYLVAAAAAAVAGWHALDLPKLVEAD 455          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7545.15709.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
MFS2.490e-19995.82domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Hippocampus1.230e-9655.73abundant transcript 1 protein (Fragment) n=1 Tax=T... [more]
Hypothetical4.980e-7646.62protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Hypothetical6.150e-7362.94protein n=2 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
MFS1.090e-6347.08domain-containing protein n=2 Tax=Monodopsidaceae ... [more]
Hypothetical3.510e-5944.98protein n=2 Tax=Proboscia inermis TaxID=420281 Rep... [more]
MFS4.760e-5641.79domain-containing protein n=2 Tax=Fistulifera sola... [more]
MFS1.350e-5539.13general substrate transporter (Fragment) n=1 Tax=F... [more]
Hypothetical1.320e-5337.82protein n=1 Tax=Spumella elongata TaxID=89044 RepI... [more]
Hypothetical5.220e-5341.52protein n=4 Tax=Phaeomonas parva TaxID=124430 RepI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7545contigE_fasciculatus_S2_contig7545:4164..7362 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score573.9
Seed ortholog evalue4.8e-161
Seed eggNOG ortholog2880.D7FX29
Preferred nameHIAT1
Model size1431
KEGG koko:K10393
Hectar predicted targeting categorysignal anchor
GOsGO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0051179,GO:0051234,GO:0055085
Exons4
EggNOG free text desc.folate import across plasma membrane
EggNOG OGsKOG2816@1,KOG2816@2759
Cds size1017
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7545.15709.1prot_E_fasciculatus_S2_contig7545.15709.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7545 4572..7356 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842416.0175762-UTR-E_fasciculatus_S2_contig7545:4163..45711696842416.0175762-UTR-E_fasciculatus_S2_contig7545:4163..4571Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7545 4164..4571 -
1696842416.0731168-UTR-E_fasciculatus_S2_contig7545:7356..73621696842416.0731168-UTR-E_fasciculatus_S2_contig7545:7356..7362Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7545 7357..7362 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842416.0340688-CDS-E_fasciculatus_S2_contig7545:4571..50161696842416.0340688-CDS-E_fasciculatus_S2_contig7545:4571..5016Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7545 4572..5016 -
1696842416.045853-CDS-E_fasciculatus_S2_contig7545:5854..60391696842416.045853-CDS-E_fasciculatus_S2_contig7545:5854..6039Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7545 5855..6039 -
1696842416.0549452-CDS-E_fasciculatus_S2_contig7545:6392..65451696842416.0549452-CDS-E_fasciculatus_S2_contig7545:6392..6545Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7545 6393..6545 -
1696842416.0636797-CDS-E_fasciculatus_S2_contig7545:7122..73561696842416.0636797-CDS-E_fasciculatus_S2_contig7545:7122..7356Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7545 7123..7356 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7545.15709.1

>prot_E_fasciculatus_S2_contig7545.15709.1 ID=prot_E_fasciculatus_S2_contig7545.15709.1|Name=mRNA_E_fasciculatus_S2_contig7545.15709.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=339bp
MGAYIALHHGNEAVFLCSVLLIGIDLVFIAVYLPESLGAGEELEFEGAGG
GGGGGLRKELQRSRTASYGGGDALGAFQWNPLASLKAFSGNPLLKTTAKI
TLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVR
WMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYP
SISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLP
GCPYLIAAVVCLAALLLSYEIPDTIDDDDSGLLLGTFGKDLPEAGEGAEE
MVALLASDDGDSSDNGAGREEGEEAPRRGGAALKRQQL*
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mRNA from alignment at E_fasciculatus_S2_contig7545:4164..7362-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7545.15709.1 ID=mRNA_E_fasciculatus_S2_contig7545.15709.1|Name=mRNA_E_fasciculatus_S2_contig7545.15709.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3199bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7545:4164..7362- (Ectocarpus fasciculatus EfasUO2)
CCGGCCATGGGGGCGTACATCGCTCTCCATCACGGAAACGAGGCAGTCTT CCTGTGCTCCGTCCTGCTCATCGGCATCGACCTTGTTTTCATCGCCGTTT ACCTGCCGGAGTCGCTGGGGGCGGGGGAAGAGCTGGAGTTTGAGGGGGCC GGGGGGGGGGGGGGGGGGGGGTTGAGGAAAGAGTTGCAGCGTTCGAGAAC AGCTTCGTACGGCGGCGGGGACGCGTTGGGCGCGTTCCAGGTGATGTGGC GGGGAACGGCTGCGCTTTTGTGTGTTGCATGGGGGCGTCTGTGATATATC GATAAACTACTCACCACGTGAGACGAGGCTCACGCAAAGGCATCGTGGTA AATGCCTTGAACTCCTCTCACGCGGTATGTAGGGGAGGGTTCGAAAGCGA TAGAAAGCCGGACGGAGCGAATGTGAAACTTGGCGTGTTCTAGGGTACAG GAGAAGCCTGGCCCACATGTGGTGGTCTCGGCTGTCGTTGCTGTTGTACT TTTCGGTTGGCAACGAGCTGGAGTGTGTCCGCCATGTCCTCGAAGATGGT GCATCTCACGTAGTCACAACTATTGTCTTGGCGGGAACAAACCAAGCTCT GGATTGCAAGCTGGTCGCTATCCGTGTAATCCGGCCAGATGCTCGCCCTC CTGGTGCTCTTTCCGACAACCTCACATTCGCTTGAGCTCAAGTGTATGAT CCAGAGTTTCGTGCTCCTGTGGGTTTGAACGTACAGCTTCGTGTGCTTCC CTTGCTGAGCTTTCCCTTGTGCATCTCCGTCCCCACCCCGCCCCACCCCC ACTCTCCGCTTGCTCAGTGGAACCCTTTGGCGTCTCTAAAAGCCTTCTCG GGAAACCCTCTCCTCAAGACCACCGCCAAAATCACGCTCCTCTACTACAC TAGCGTGTGGGCGGTCGTGTCCACCCTGATGGTTTACGTCGCGAGACAGT TTCAGTTCGGGCCGGTCAAGGTGAGCATTCCGTTTCGTTCTCTCTCTCTC TCTCTCTCTCTGTCACCAGGAAAACTGCCGAGCACTCAGCACGCGTCAAA CACACGCGATGTTCAAGCCCTTAGGTTGTGTGTCCGTTCGCGCCAAGCTG TTGGTCAAGCCTCAACGGCAAGAGGCTACGCAGCAGCCCTGTTTTTCACA CCGCCAAGAATAACCTGGCGACCGTCCGTCGATGCTCGAACGACACAAGC GAGAGAGCCTTACATCGATATTTGTTCTCCACGTATAACCGTGCCATTCA AACATCTCGGTCTGCGTTCTGCTGTGCTTTGCTTTGGTCTCGTTCGCTCG GCGGCGGCGGCGGCGGCATCCAGATCGGGCAACTTCTGAGCGCGTTCGGC GTGTGCACCATGTTCGCGGAGGGCGTGCTGGTGAGATGGATGGTGCCGAA GCTCGGTGAGAAGCTCACCCTCCAGATCGGGCTCCTCGGCTTCGCGGCGC AGTGCGTGCTGCTGGGCCTGGCGCACTCGGAGTGGATGGTTTTCGCGAGC ATGGGCGGGTGAGAGATGAAGCAAATACTTGTCGCTGGCGAAGTTTTCTG TCGTCCCTGTGTACCGATCCTCGTGTATCGCGTGTACTCTATCCACGAAG CGATTTTGTTTACCCCCAGGGAGGGGGCGCGTTGTGTTGGGGGGTGCCAC AAGCCGAAGGCTACCACTCACAGTTGTGCAAGCATCAAAGGGCACACCTA ACTAAGTCATGCCACCCATCCACAACCTACGGAACCATTGTGTCCTTGTA GCGTGGTGGTTCATACCAAACCCGCGCCCGGAAATAGTTTACCACCTGGC GCCGTGAGCCCGTTTAGCAGCTACCTCCTCTACTCTCGGGGGTGGGGGTG GGTGGAACATCATGAATGGAACCTCCATTCTCCAAGTGATGGATGCGGGT AGTTTCTGGTGTGTGCAGGGTCATTGCGGCGGGGCTCCTGGGTCCAGTCG CCGATACGAGTGCGTCTATCTTCTCTTGTCTCAAACACCGATATCCGGCG TCCGGCGCTCGTGAGCCTTGCACCCCTTCTTTTCTTTTCGCTGCAAGCGC AGTAATCGCCCCCGCTTGTGCCGCGTGGTGGGCGATGAGGCGCACTGGCC ATCGCGTGATCCGACATCGAACACATCGCATCACATGGGGAATCTATCGA TCACATGGATCGCAAGACTGCTACTGCTGTGGAGGTTTTTTCCTCAATAA CCTCCGGGGCTGACCGCCCGTCACTTGTGTAATTGTGCAGTCTTGTGTTG AAATGCGACGGAAGACGTTTTCGTGAGCGCCCCCCCCCCCCCCATGCTTT TGGTCCTCCACTTGTCTGTCTGTCTGTCGCTGCTTGTCTGGAAAAGGTCG TTGCTGAGCAACCTGGTCTACCCGTCCATCTCGAGCCTCATCTCCCGATC GGTGGCCACCTCTAAGCAGGGCGAGGTCCTCGGGGCGATCAACGGTGTCC GCGCGCTCACCGAGGGCTTCGGCCCCCTGCTGTTCTCCTGCCTCTTTTGG TACACGGAGGACACCTTCCTGCCCGGATGTCCCTACCTGATCGCCGCCGT GGTGTGCCTCGCGGCGCTGCTGCTCTCGTACGAGATACCGGACACGATCG ACGACGACGACTCGGGCCTGTTGCTGGGCACCTTCGGCAAAGACTTGCCG GAGGCGGGGGAGGGAGCGGAGGAGATGGTGGCGCTCTTGGCGTCGGACGA CGGAGATTCTAGTGATAATGGTGCTGGCCGTGAGGAAGGGGAGGAGGCAC CGAGACGGGGGGGTGCAGCATTGAAGCGACAGCAGTTGTGAAATAGCTCC TGTTGTTTGTTTTCCCCATCATCAGTGAGTCTAGAGTTTTCGCTCTCTTT GGGCGGTGGGGTGTTTGGTGTGGTGTGTAGTCGCGTGATCTGCGGTGGTT GTGATGAGGGTGTAATCTGCGGCGCTGTTGACGTGTCGGTACAAATAGTG CAGTTTTCAGCTTTTTTATTTGGTCGGGTGTACATACGCAAGGCCATCTA TTGCACACCAGCTAGCAGCGACAGCAGCAGCAGCTTCGCTGATTCTCGAT CTCCCTGCTGCTGTTTGATCTCGCGCGTAGCCTGCGTCCACAAGATGCCA TGCGATGCTTGTTCCAGGTCCCAGTTCACATTTCATGTCCCATCATCATT TGACGACTCGTTGAAAAATTGGCCATGTTTCGTCACACCTGCCGGGCGC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7545:4164..7362-

>mRNA_E_fasciculatus_S2_contig7545.15709.1 ID=mRNA_E_fasciculatus_S2_contig7545.15709.1|Name=mRNA_E_fasciculatus_S2_contig7545.15709.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1017bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7545:4164..7362- (Ectocarpus fasciculatus EfasUO2)
ATGGGGGCGTACATCGCTCTCCATCACGGAAACGAGGCAGTCTTCCTGTG
CTCCGTCCTGCTCATCGGCATCGACCTTGTTTTCATCGCCGTTTACCTGC
CGGAGTCGCTGGGGGCGGGGGAAGAGCTGGAGTTTGAGGGGGCCGGGGGG
GGGGGGGGGGGGGGGTTGAGGAAAGAGTTGCAGCGTTCGAGAACAGCTTC
GTACGGCGGCGGGGACGCGTTGGGCGCGTTCCAGTGGAACCCTTTGGCGT
CTCTAAAAGCCTTCTCGGGAAACCCTCTCCTCAAGACCACCGCCAAAATC
ACGCTCCTCTACTACACTAGCGTGTGGGCGGTCGTGTCCACCCTGATGGT
TTACGTCGCGAGACAGTTTCAGTTCGGGCCGGTCAAGATCGGGCAACTTC
TGAGCGCGTTCGGCGTGTGCACCATGTTCGCGGAGGGCGTGCTGGTGAGA
TGGATGGTGCCGAAGCTCGGTGAGAAGCTCACCCTCCAGATCGGGCTCCT
CGGCTTCGCGGCGCAGTGCGTGCTGCTGGGCCTGGCGCACTCGGAGTGGA
TGGTTTTCGCGAGCATGGGCGGGTCGTTGCTGAGCAACCTGGTCTACCCG
TCCATCTCGAGCCTCATCTCCCGATCGGTGGCCACCTCTAAGCAGGGCGA
GGTCCTCGGGGCGATCAACGGTGTCCGCGCGCTCACCGAGGGCTTCGGCC
CCCTGCTGTTCTCCTGCCTCTTTTGGTACACGGAGGACACCTTCCTGCCC
GGATGTCCCTACCTGATCGCCGCCGTGGTGTGCCTCGCGGCGCTGCTGCT
CTCGTACGAGATACCGGACACGATCGACGACGACGACTCGGGCCTGTTGC
TGGGCACCTTCGGCAAAGACTTGCCGGAGGCGGGGGAGGGAGCGGAGGAG
ATGGTGGCGCTCTTGGCGTCGGACGACGGAGATTCTAGTGATAATGGTGC
TGGCCGTGAGGAAGGGGAGGAGGCACCGAGACGGGGGGGTGCAGCATTGA
AGCGACAGCAGTTGTGA
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