mRNA_E_fasciculatus_S2_contig7537.15704.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7537.15704.1
Unique NamemRNA_E_fasciculatus_S2_contig7537.15704.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7537.15704.1 vs.
Match: PUM-HD (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3P5_9PHAE)

HSP 1 Score: 292 bits (747), Expect = 4.570e-91
Identity = 193/255 (75.69%), Postives = 197/255 (77.25%), Query Frame = 1
Query:    1 QVANQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALRDATVPLCLDTNGNHVVQRLLQHLAPTDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPIGKV------AMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEV 747
            QVA QMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSAL+DATVPLCLDTNGNHVVQRLLQHLAPTDNA XXXXXXXXXXXXXXXXXXXXXXXXXX                                                 VP+GKV      AMLSMQKFSSNVIEKCMDRASEE+IVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFP +
Sbjct:  239 QVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXDAATVEQSRLLVSQVSKHALQLMQDPYGNYVVQYVLGICSHDEAVALVNVPLGKVGNEKMVAMLSMQKFSSNVIEKCMDRASEEIIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPSI 493          
BLAST of mRNA_E_fasciculatus_S2_contig7537.15704.1 vs.
Match: PUM-HD (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB6_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 2.250e-58
Identity = 102/106 (96.23%), Postives = 102/106 (96.23%), Query Frame = 1
Query:  439 VPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLD 756
            VPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFP    D
Sbjct:   73 VPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPVARKD 178          
BLAST of mRNA_E_fasciculatus_S2_contig7537.15704.1 vs.
Match: PUM-HD (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTA7_9STRA)

HSP 1 Score: 169 bits (428), Expect = 2.070e-42
Identity = 136/256 (53.12%), Postives = 174/256 (67.97%), Query Frame = 1
Query:    4 VANQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALRDATVPLCLDTNGNHVVQRLLQHLAPTDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDEDVPA 771
            V +++V   +NLHGTRSVQ+I+EVC+ T  QVA + +ALR   V LC+D NGNHVVQR LQHL   D A                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             P+G++  LS+QK+SSNV+EKC+++ASE++   Y+ E+  P  ++ L+QDQYANYV+Q+ L +A     L LVE++R HL  MRN++GGRR+L++I+KRFP V L  D+ A
Sbjct:  885 VQDELVSGALNLHGTRSVQRILEVCK-TKDQVATITAALRHDVVRLCVDANGNHVVQRALQHLGSEDRAFIFEAVSQACLEVSTHRHGCCVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCAADEIRPVTSCPLGRITSLSVQKYSSNVVEKCLEKASEDIQSAYIDEMCAPGNIKHLMQDQYANYVVQRALSVATHSRGLHLVEAVRPHLHAMRNTAGGRRILSKITKRFPNVDLGADMMA 1139          
BLAST of mRNA_E_fasciculatus_S2_contig7537.15704.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV53_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.050e-36
Identity = 86/253 (33.99%), Postives = 125/253 (49.41%), Query Frame = 1
Query:    4 VANQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALRDATVPLCLDTNGNHVVQRLLQHLAPTDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDED 762
            V N +V+A +NLHGTRSVQKI+E CR    QV VV  AL    + LCLD NGNHVVQ+ +Q L                                                                                    +G V  LS+QKFSSNV+EKC+++A++ ++   + E+++P+++  LL DQ+ANYV+Q++L +AP   A  LV++I+ HL  +RN+SGGRR++ +I KRFP+  L +D
Sbjct:   24 VKNHLVKASLNLHGTRSVQKILEHCRTNDEQVKVVREALEPHILQLCLDGNGNHVVQKGVQCLGVDQRDFLYRAVGQSLPAVACHRHGCCVLQRCLDSASPEQRRGLIAVVVVNALQLMQDAYGNYVVQYVLDIGTQLDAWSVCEKCLGHVHNLSIQKFSSNVVEKCLEKANDRLLNLMISEISNPSSLAELLNDQFANYVVQRSLVVAPHAVATELVDNIKPHLPQLRNTSGGRRIIAKILKRFPKTDLGDD 276          
BLAST of mRNA_E_fasciculatus_S2_contig7537.15704.1 vs.
Match: PUM-HD (domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7AAA0_9STRA)

HSP 1 Score: 145 bits (366), Expect = 4.920e-36
Identity = 88/256 (34.38%), Postives = 123/256 (48.05%), Query Frame = 1
Query:    1 QVANQMVEAGMNLHGTRSVQKIIEVCRGT--PSQVAVVVSALRDATVPLCLDTNGNHVVQRLLQHLAPTDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDED 762
            QVA+ +V A +NLHGTRSVQK++E+C  +  P  V ++V AL+D  V LC+D+NGNHV+QR LQ++  T N                                                                               +G V  LS+QKFSSNVIEKC++ A + +   +V E+     M  +LQDQYANYV+Q+ L +A  +  L LV ++R HL  M+N+ GGRR+  RI KRFP + +  D
Sbjct:  110 QVAHHLVAAALNLHGTRSVQKVVEICSSSSMPQLVELIVDALKDDAVRLCIDSNGNHVIQRALQYMPATYNQFVFDAVSAECTVVGTHRHGCCVLQRCVDAANPAQRREVIAQVEKHAMKLMQDPYGNYVVQYVLDACSTADVVGVMTKCVGHVLELSIQKFSSNVIEKCLELAPDYLCQTFVREIIASPRMHRMLQDQYANYVVQRALSVASDENCLDLVTAMRPHLTSMKNTQGGRRIQARILKRFPHLDVGWD 365          
BLAST of mRNA_E_fasciculatus_S2_contig7537.15704.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C9G3_PYTOL)

HSP 1 Score: 149 bits (377), Expect = 9.560e-36
Identity = 91/269 (33.83%), Postives = 128/269 (47.58%), Query Frame = 1
Query:    4 VANQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAV---------------VVSALRDATVPLCLDTNGNHVVQRLLQHLAPTDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDEDV 765
            V+  +V A +NLHGTRSVQK++EVC  +   V +               +V AL+D  V LC+D+NGNHV+QR LQ + P  N                                                                              P+G V  LS+QKFSSNVIEKC+++A   ++ +Y+ E+     M+ +LQDQ+ANYV+Q+ L +A  D  L LV++IR HLV M+N+SGGRR+  RI KRFP + L+ D+
Sbjct:  639 VSGNLVAAALNLHGTRSVQKVVEVCATSAEVVELDSDGNELRRVNLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANDTQKREVITQVEKQAMKLMQDPYGNYVVQYVLDSCTAEEAYGVIVKPLGNVFELSIQKFSSNVIEKCLEKAPPVVLTQYIDEITTCPKMQKMLQDQFANYVVQRALCVASEDQCLALVKAIRPHLVAMKNTSGGRRITARILKRFPHMDLNLDM 907          
BLAST of mRNA_E_fasciculatus_S2_contig7537.15704.1 vs.
Match: PUM-HD (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG61_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 1.870e-35
Identity = 92/254 (36.22%), Postives = 124/254 (48.82%), Query Frame = 1
Query:    4 VANQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALRDATVPLCLDTNGNHVVQRLLQHLAPTDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDEDV 765
            VA++M EA +NLHGTR VQK++E+CR T +Q AV+  +L  + V L LD NGNHVVQR LQH+    N                                                                              P+G VA LS QKFSSNV+E C++RA  E+  K+V ELA    +R L+ DQYANYV+Q+ L +A  +  L LV +IR HL  M+++S GRR+  +I KR+P V L E++
Sbjct:  858 VADRMPEAAVNLHGTRCVQKVVELCR-TDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAIHRHGCCVLQRCLDAAGPNLRIKLIEEVARNGLRLMQDPFGNYVVQYVLKTCSREETYMLCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVASNEEGLKLVNAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEI 1110          
BLAST of mRNA_E_fasciculatus_S2_contig7537.15704.1 vs.
Match: PUM-HD (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX6_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 5.190e-35
Identity = 91/254 (35.83%), Postives = 123/254 (48.43%), Query Frame = 1
Query:    4 VANQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALRDATVPLCLDTNGNHVVQRLLQHLAPTDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDEDV 765
            V ++M EA +NLHGTR VQK++E+CR T +Q AV+  +L  + V L LD NGNHVVQR LQH+    N                                                                              P+G VA LS QKFSSNV+E C++RA  E+  K+V ELA    +R L+ DQYANYV+Q+ L +A  +  L LV +IR HL  M+++S GRR+  +I KR+P V L E++
Sbjct:  470 VTDRMPEAAVNLHGTRCVQKVVELCR-TDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAIHRHGCCVLQRCLDAAGPNLRIKLIEEVARNGLRLMQDPFGNYVVQYVLKTCSREETYMLCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVNAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEI 722          
BLAST of mRNA_E_fasciculatus_S2_contig7537.15704.1 vs.
Match: PUM-HD (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB5_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 2.880e-34
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 1
Query:    1 QVANQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALRDATVPLCLDTNGNHVVQRLLQHLAPTDNA 210
            QVA QMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSAL+DATVPLCLDTNGNHVVQRLLQHLAPTDNA
Sbjct:  138 QVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNA 207          
BLAST of mRNA_E_fasciculatus_S2_contig7537.15704.1 vs.
Match: Pumilio-family (RNA binding repeat domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SFT8_PHYIN)

HSP 1 Score: 141 bits (356), Expect = 9.220e-34
Identity = 90/285 (31.58%), Postives = 126/285 (44.21%), Query Frame = 1
Query:    4 VANQMVEAGMNLHGTRSVQKIIEVC-------------------------------RGTPSQVAVVVSALRDATVPLCLDTNGNHVVQRLLQHLAPTDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDEDV 765
            V++ +V A +NLHGTRSVQK++EVC                               R T S   ++V AL+D  V LC+D+NGNHV+QR LQ + P  N                                                                              P+G +  LS+QKFSSNVIEKC+++A E +  KY+ E+     M  +LQDQ+ANYV+Q+ L +   +  L LV++IR HL  M+N+SGGRR+  RI KRFP + +  D+
Sbjct:  156 VSSNLVAAALNLHGTRSVQKVVEVCATSSSVIEEDFDEEEEGEEYGYEERPEGGKGRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIAQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQDQFANYVVQRALCVCAEEQCLLLVKAIRPHLAAMKNTSGGRRITARILKRFPNMDISMDM 440          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7537.15704.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
PUM-HD4.570e-9175.69domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
PUM-HD2.250e-5896.23domain-containing protein n=1 Tax=Ectocarpus silic... [more]
PUM-HD2.070e-4253.13domain-containing protein n=2 Tax=Monodopsidaceae ... [more]
Hypothetical1.050e-3633.99protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
PUM-HD4.920e-3634.38domain-containing protein n=1 Tax=Aphanomyces inva... [more]
Uncharacterized9.560e-3633.83protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
PUM-HD1.870e-3536.22domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
PUM-HD5.190e-3535.83domain-containing protein n=1 Tax=Ectocarpus silic... [more]
PUM-HD2.880e-3497.14domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Pumilio-family9.220e-3431.58RNA binding repeat domain-containing protein n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7537contigE_fasciculatus_S2_contig7537:2610..7330 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score198.0
Seed ortholog evalue5.6e-48
Seed eggNOG ortholog2880.D8LGB6
Model size1189
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.regulation of translation
EggNOG OGsCOG5099@1,KOG2049@2759
Cds size795
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7537.15704.1prot_E_fasciculatus_S2_contig7537.15704.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7537 2989..7315 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842415.4278572-UTR-E_fasciculatus_S2_contig7537:2609..29881696842415.4278572-UTR-E_fasciculatus_S2_contig7537:2609..2988Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7537 2610..2988 -
1696842415.5077212-UTR-E_fasciculatus_S2_contig7537:7315..73301696842415.5077212-UTR-E_fasciculatus_S2_contig7537:7315..7330Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7537 7316..7330 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842415.4416246-CDS-E_fasciculatus_S2_contig7537:2988..30571696842415.4416246-CDS-E_fasciculatus_S2_contig7537:2988..3057Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7537 2989..3057 -
1696842415.4520082-CDS-E_fasciculatus_S2_contig7537:3620..37761696842415.4520082-CDS-E_fasciculatus_S2_contig7537:3620..3776Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7537 3621..3776 -
1696842415.4632719-CDS-E_fasciculatus_S2_contig7537:4465..45971696842415.4632719-CDS-E_fasciculatus_S2_contig7537:4465..4597Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7537 4466..4597 -
1696842415.478998-CDS-E_fasciculatus_S2_contig7537:5141..52311696842415.478998-CDS-E_fasciculatus_S2_contig7537:5141..5231Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7537 5142..5231 -
1696842415.4896753-CDS-E_fasciculatus_S2_contig7537:6240..63811696842415.4896753-CDS-E_fasciculatus_S2_contig7537:6240..6381Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7537 6241..6381 -
1696842415.4986463-CDS-E_fasciculatus_S2_contig7537:7108..73151696842415.4986463-CDS-E_fasciculatus_S2_contig7537:7108..7315Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7537 7109..7315 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7537.15704.1

>prot_E_fasciculatus_S2_contig7537.15704.1 ID=prot_E_fasciculatus_S2_contig7537.15704.1|Name=mRNA_E_fasciculatus_S2_contig7537.15704.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=265bp
MVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALRDATVPLCLDTNGNH
VVQRLLQHLAPTDNAFVFEMLAEACVPVATHRHGCCVIQRAIDAATVDQS
RLLVSQVSKHALQLMQDPYGNYVVQYVLGICSRDEAVTLVNVPIGKVAML
SMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQK
TLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDEDV
PAIAVVRAPAGVEV*
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mRNA from alignment at E_fasciculatus_S2_contig7537:2610..7330-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7537.15704.1 ID=mRNA_E_fasciculatus_S2_contig7537.15704.1|Name=mRNA_E_fasciculatus_S2_contig7537.15704.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4721bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7537:2610..7330- (Ectocarpus fasciculatus EfasUO2)
CAGGTTGCCAACCAGATGGTGGAGGCGGGGATGAACCTCCACGGCACCCG GTCGGTGCAGAAGATCATCGAGGTCTGCAGGGGCACCCCCTCCCAGGTGG CCGTGGTGGTGAGCGCCCTCAGGGACGCCACGGTGCCCCTCTGCCTCGAC ACCAACGGCAACCACGTCGTGCAGCGGCTCCTGCAGCACCTTGCCCCGAC CGACAATGCCTTCGTCTTCGAGGTAATAAACGGACCATTCCGGTTTTTTT TTTCGTTTTTTGTGTGAAGCGTTTGTTGTGACCGCGAAGGCGTTTTCTAC CGTAGCTTCGGGTTGTTGTTGGGTCGACGTTTGACGACAGGAGGTACGGT GGGGGGTACAAAGTTGCAGCTAGAACCGCTCACATCGTCGTGGCCATTGT GGACAAGCTGGTTTTGTGATTTTTTCCCCGGATGCTCGGAGATTGGATTT TCTGCTCGTTCTGTGCATTCGACTGGTGGAAAGACGAATACCGGCGTGCC TTGTTCAGGTCTCCTTGGACAAGAAGGAACGGCGTGCTTCCCGACGAAGA TAGTCATGAGGATTCGGCGGCCTACAACACCTCCCTTTCGTTTTCACTCC TGCAGTTTGTCCCTTCTTGCCTTCATTCGGGTTGTTTTCACACCTACTGC TGTTGTTGTCGATCCCCCTCATTTCTTTGGAAAGTCTTGTTGGTGTGTTT TCTCACGGGCAGGTGCTGTCTGTCGGAGCCTTCCTTTCATTTCACTGCTT CACTATTTTAGTGTATTTTTTTGCCTTAGTCAGTCAGGTGTTCTCTTGGT TGCTGTTGGTACTGTTGTTGTGTTGTTGCCAAACCCCGTTTATTGTGTAC TTACAGGTGCTGCTGGCGGACCCTTGCCTTCGTTCACTTTTTCACATATT TTTTTTCGACCTCTCATTTTTTTCGTCTGGCGTGCTTGCTTTCTCGCAGA TGCTGGCCGAGGCCTGCGTCCCCGTGGCCACCCACCGCCACGGGTGCTGC GTGATCCAGAGGGCCATCGATGCCGCCACCGTCGACCAGTCGAGGCTCCT CGTCTCCCAAGTGTCGAAGCACGCGCTTCAGCTCATGCAGGTAACAAAAA TAAAAGGCTTTCATCCGTGGTTGATGCCCCCCAACAAACTGTTGTGTGCC TGTGCATATTTCCTTTGAACTAGTTGGTAACGCGCCGAATAAAGATCACC AGTCCGCCGGGCACATCCTTTCCAGTCCTTTCCAGCCCGCGGAGGCCCCT CCACAGGACCCACGGGGGAGGTTTGTGAAGACTCGTTCCGGCCTCCGGAT TCGGAGTGATGGTAGACTGAGAAGACCTACGGCAATACCTAGAACTTCCC TTTCGGTGTTTCTCCTGTACTTTTCTCTACGTAGAGCAAAGCCTCGCTGT TTCGCCCTCGCGATTCTTTCTTGACCTCTCTTCACCAGCGTTGCACAAGA AAGGTCTCTTACCTATCATAGTCCTGTTGTGTTGCCGTCGTTGACGGTTG TTGTGGACGACGTATTTGATGAGTCGAAGTATCATCTGTGCTGTGTTTGC ACCATGAAACATCGACCGCGCTAAAACGACAAATCGTCATAACTCCCGCT ACCGGATATTTCCGCGAATGCGCTCTCCAGCCCATGCGGCTCCGTAGACA TCTCCCTCATAGACAGAGGGCCGCAGAGCACGTTAACCGATCTATTGTGT TTTATGGGAGAGAGCGTGCAGCGAAGGGACAGTGCCGTTTTACTCTTAAG CCTCTTCATTTCACTCATTCATTAGAGATCCATCCCAAAGATTGAATTCA AATCAGCCAGCGGTGTAAATATATTCTGCCGTTTTTTATTTCTTGCGAGA GAAAGGGCGGTCTGCAGTAGAATGTGAAACGCCTATATACACGAATCATA GGACGTACGCCCCATGACTTTCGGCGTGCGAACCTGTAGTACATGGCCAC GTCCCAGTGCTTCTTTCCACCACGATGTACCTCGAGAAACAATACAAATC TACTGTACTTGTACGTCAACACGAGCATTGTCCCGGTGGGGGGCTTGTCT TTTCGCTCCCGTGTTCGTTTCGTGTTCTCTCTGCTGCGTGTCTTGGCAGG ACCCGTACGGCAACTACGTGGTCCAGTACGTCCTGGGAATCTGCTCCCGC GACGAAGCCGTCACGCTTGTCAACGTCCCGATTGGAAAGGTGGGGAATGA AAAGGATTATGTGTGCGTCCCTCCGATATGGTATAGATTCAGCACGAACC GCTGCTGCGATGATCGCCGATTTCTCGTCTTGCCGTTTTTTTCTGGTGTG GCGTGGGAGCGTACAAGCATCTTGGGCCTTCTGTGGGGTTATTTAACGGA TGGATGCGGTCATCGTCGATTGCATGAAGTGCCCTTGCGGCGGCAGCAGC GGGGAGACGAAGACAAACGAGAGAGAGAGAGAGAGAGAGAGATTGATTGC AGTCGACTCGTCTAGTGGCCTTGACTTGATAGCACTAGCTGAAACTCATT CCCCAGTTCCTGTGCATGGTATATTGGGGCTCATCGTATCATTTGTTGCC ACGAACTCGCAACCCAGTCTAGAGCTTGGTTTGTTCGATCTATTTATCCG GAAGTGCGCTCTGTCGACTACCGCGCTGTCCTGAACCCGAACTACCATCT CATCAACCAAAACCCACGATAGCTGTTGTATGCAACTGTAACAACCTGCC CGCCGTTCGCCCTCCTTGTCACGCGCTACACAGGTGGCGATGCTCTCGAT GCAGAAGTTCTCGTCTAACGTGATCGAGAAGTGCATGGACAGGGCGTCGG AGGAGATGATCGTCAAGTACGTGCACGAGCTGGCCGACCCCGCCGCCATG CGCCCCCTCCTGCAGGTGAGGTCAACGAATAGCACCAAACATAACGTACA AACGTAGTATACCACCAAACAGAGACTACAACCTTCGAGATACTACCACA GGACATCACCGCTTCCATCCAGCCAAAGAAGGTTTTGCTCGTTTGACGGA ATGACAAGCCGGCGTAGAGATTATTGTTTCTGCTCTTTCACTCACCCGAC AGTTGTTTTTCGTTTCTGTTTCATATTTTTCCTCTGGTGGGGGTGGGTAG GTCTTACAGTCGCAAGGATGTTCGGGTACGCTTCCTGGGACGAACTCCAA CTCAAGGGGCTTGTCTTCCCCTACCTTTCGTCCTTTTGTCGCGAGAAGGG GGCATTGTCTACATAGTGCGGTGTGGTGCACGGGCTTACCATGCTTCGTG TTAAATGAGATTCATTCCTAGCTGTGAATCCCCACCCCCCGCCTCCGGTA GGCCGACCGGAGAATGGACCAACAGCACTCGAGCTATGCATAGAATGGAC CTGGCCCCACTTCCGTTTACCTGATTTTAGTTTGCGTGTATGTGCTGATG CTTGCCTCGCATCCGTCACCTTCTGGCCGCCCGGCGCATTGATAAGAAGG AGTCCGATCATCGTCTCTTCCCCATTTGAGTACTTTATTGTTGCCCGAAC CACGACGAGCTGATTGGACGGCTCACTTTCTCGCTCGTGGTTATCGCCAT TCAGGACCAGTACGCGAACTACGTGATCCAGAAGACGCTGCAGCTGGCCC CCAGGGACGCGGCGCTGACCTTGGTGGAGAGCATCCGCGAGCACCTGGTC CTCATGCGCAACTCCTCCGGGGGAAGGCGGATGCTCACCAGGATCTCCAA GCGGTTCCCGGTGAGTGTTCTCATTTTTTTTTTGCGGGGAGGGTTTTTTT TTCTGTGCTGTTCTGCTGCACTCCTCGTGCGCAGTTGTTAACGGAGAGCA TGTCGCGTCGCTATTGTAGAACTAAAAAGACTATGCTTGTTGTGCGGACC GTTGCTGGCGTTTCGCCCCATCGCTAGGTGCCATATTGTTTTCTTGTCGT GCTGTTTCCCTCACTTGCCCTTGTGTGGCGCTCGTTCGGTTTCGAATTTT CTTGTTTGAAGGTGATCATTTAACCTTGTTTTTGATGCAACAGTCATTTA TACTCCATATACTGTTATTCCGCGGCACTATCAGTGTTCGAAACGATCAA GCTACGGGCAACCATGCCCCCTTCCCTCCCTCTCCCCCTCCCTCCCTCTC CCCCTCCCTCCCTCTCCTTCAATTCGAGGGATGGATTGAGGGATCTTACA ATACCCCCTTTGACCCCCCCCCTCCTCCGGTTCTGACAATTGTACGAGAT GAAGAGTATTTTTGTTGAAACCGCGATACCAAATCTCCGCCCTCAAAACG CCTTCACCTTGTTCTTCATTCAGGAGGTGAGCCTCGATGAGGACGTCCCT GCTATCGCGGTCGTCAGAGCTCCCGCCGGAGTCGAGGTCTGAACAAGAGA AGATTCGAGGATGTGCCCACAACACACGATGATTCCGATTGTTGGCTGAA TGATTAGTCGAGGTCTGAACAAGGTTCACAATTGATTGATTTGATTGAAT GATTACCGGTTGGACGACACTCTTGGATACCACGACGGCGAAGAAGATTT TGTTTTAGTCTCAGTCTAGGAACCAAGCGCGACATCGTGCGCCACTCTAA AGACGTGAAGTAGCAAGTGTGGTGGGGTGGCATTGAAAGCAGTGTGTGTG TGTGCCGGTTTTTTTATACAACGCGCTTTGGTGGATGAAGCCCCGAAGCC GCTAGCTTTTCCTTACGATCGCCACCTTCAAAGAGGGACGGGGGAGAGGA CGTTCTCTGATTTCGTTGTGG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7537:2610..7330-

>mRNA_E_fasciculatus_S2_contig7537.15704.1 ID=mRNA_E_fasciculatus_S2_contig7537.15704.1|Name=mRNA_E_fasciculatus_S2_contig7537.15704.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=795bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7537:2610..7330- (Ectocarpus fasciculatus EfasUO2)
ATGGTGGAGGCGGGGATGAACCTCCACGGCACCCGGTCGGTGCAGAAGAT
CATCGAGGTCTGCAGGGGCACCCCCTCCCAGGTGGCCGTGGTGGTGAGCG
CCCTCAGGGACGCCACGGTGCCCCTCTGCCTCGACACCAACGGCAACCAC
GTCGTGCAGCGGCTCCTGCAGCACCTTGCCCCGACCGACAATGCCTTCGT
CTTCGAGATGCTGGCCGAGGCCTGCGTCCCCGTGGCCACCCACCGCCACG
GGTGCTGCGTGATCCAGAGGGCCATCGATGCCGCCACCGTCGACCAGTCG
AGGCTCCTCGTCTCCCAAGTGTCGAAGCACGCGCTTCAGCTCATGCAGGA
CCCGTACGGCAACTACGTGGTCCAGTACGTCCTGGGAATCTGCTCCCGCG
ACGAAGCCGTCACGCTTGTCAACGTCCCGATTGGAAAGGTGGCGATGCTC
TCGATGCAGAAGTTCTCGTCTAACGTGATCGAGAAGTGCATGGACAGGGC
GTCGGAGGAGATGATCGTCAAGTACGTGCACGAGCTGGCCGACCCCGCCG
CCATGCGCCCCCTCCTGCAGGACCAGTACGCGAACTACGTGATCCAGAAG
ACGCTGCAGCTGGCCCCCAGGGACGCGGCGCTGACCTTGGTGGAGAGCAT
CCGCGAGCACCTGGTCCTCATGCGCAACTCCTCCGGGGGAAGGCGGATGC
TCACCAGGATCTCCAAGCGGTTCCCGGAGGTGAGCCTCGATGAGGACGTC
CCTGCTATCGCGGTCGTCAGAGCTCCCGCCGGAGTCGAGGTCTGA
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