prot_E_fasciculatus_S2_contig7457.15627.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7457.15627.1
Unique Nameprot_E_fasciculatus_S2_contig7457.15627.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length338
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7457.15627.1 vs. uniprot
Match: D7G2K8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K8_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 1.930e-61
Identity = 268/348 (77.01%), Postives = 275/348 (79.02%), Query Frame = 0
Query:    1 MAGEPVSCPICMCSVVRPTVTKCAHLFCRECISRELQRTPAFGMVQLPQAKCPICRRTMKGSEMMELQTLSEVEEAMAIDAPSTAENNRGDTGAVAAEGGATEASEGGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSDPAAATCGGGSSCXXXXXXXXXXXXXXXXXXXXXXSGRSAVDPTSTSSRG----------PGEGSAGDPXXXXXXXXXXXXXXXXXXXXXXXXXXPAPAGDEDGVAGPSLVIPTFRFTPTATASFLSQYRAATSSQSSVKLDALVRDLDTTLLHDPAAKFVIFSQYPQV 338
            MAGEPVSCPICMCSVVRPTVTKCAHLFCRECISRELQRTPA GM+QLPQAKCPICRRTMKGSEMMELQTLSEVEEAMAIDA S A+N+ GD GA                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                XXXXXXXXXXXXXXXXXXX   +G S     S++ RG                   XXXXXXXXXXXXXXXXXXXXXXXXXX      EDGVAGPSLVIPTFRFTPTATA+FLSQYRAATSSQSSVKLDALVRDLDTTLLHDP AKFVIFSQYPQV
Sbjct: 1035 MAGEPVSCPICMCSVVRPTVTKCAHLFCRECISRELQRTPALGMIQLPQAKCPICRRTMKGSEMMELQTLSEVEEAMAIDASSAADNSSGDAGAXX-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSNGGSVA--ASSNERGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGVAGPSLVIPTFRFTPTATATFLSQYRAATSSQSSVKLDALVRDLDTTLLHDPTAKFVIFSQYPQV 1367          
BLAST of mRNA_E_fasciculatus_S2_contig7457.15627.1 vs. uniprot
Match: A0A6H5JHY1_9PHAE (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY1_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 1.710e-28
Identity = 103/148 (69.59%), Postives = 105/148 (70.95%), Query Frame = 0
Query:  215 SGRSAVDPTSTSSRGPGEGSAGDPXXXXXXXXXXXXXXXXXXXXXXXXXXPAPAGDEDGVAGPSLVIPTFRFTPTATAS------------------------FLSQYRAATSSQSSVKLDALVRDLDTTLLHDPAAKFVIFSQYPQV 338
            +GRS VDPTST          GDP    XXXXXXXXXXXXXXXXXXXXX PA AGDEDGV GPSLVIPTFRFTPTATA+                        FLSQYRAATSSQSSVKLDALVRDLDTTLLHDP AKFVIFSQYPQV
Sbjct:  126 NGRSGVDPTSTXXXXXXXXXXGDPRSAAXXXXXXXXXXXXXXXXXXXXXAPA-AGDEDGVTGPSLVIPTFRFTPTATAAQLSGAIPPPVMFPRDNTVPSLEQTFLSQYRAATSSQSSVKLDALVRDLDTTLLHDPTAKFVIFSQYPQV 272          
BLAST of mRNA_E_fasciculatus_S2_contig7457.15627.1 vs. uniprot
Match: A0A835YV89_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV89_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 3.700e-9
Identity = 39/89 (43.82%), Postives = 52/89 (58.43%), Query Frame = 0
Query:    1 MAGEPVSCPICMCSVVRPTVTKCAHLFCRECISRELQRTPAFGMVQLPQAKCPICRRTMKGSEMMELQTLSEVEEAMAIDAPSTAENNR 89
            MAG+ V CPIC+ SVVRP VT C H++CRECI  EL          +P  KCP+CRR +   ++ ELQ  +  E+  A    S  ++NR
Sbjct:  166 MAGDEVHCPICLGSVVRPCVTMCVHVYCRECIGAELD-IRLHQPTHVP--KCPLCRRDVNPGDVCELQLDTTEEDPDAQQHDSAQQHNR 251          
BLAST of mRNA_E_fasciculatus_S2_contig7457.15627.1 vs. uniprot
Match: A0A7S4DH38_HETAK (RING-type E3 ubiquitin transferase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DH38_HETAK)

HSP 1 Score: 66.2 bits (160), Expect = 6.400e-9
Identity = 32/66 (48.48%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    3 GEPVSCPICMCSVVRPTVTKCAHLFCRECISRELQRTPAFGMVQLPQAKCPICRRTMKGSEMMELQ 68
             + V CP+CM +V RPTVT CAHLFC+EC+   L      G    P  KCP+CRR +  SE+ME++
Sbjct:  148 ADDVHCPVCMGAVSRPTVTPCAHLFCQECLLAVLADHARQGGAGAP--KCPLCRRDVARSELMEVE 211          
BLAST of mRNA_E_fasciculatus_S2_contig7457.15627.1 vs. uniprot
Match: A0A2K1ZW75_POPTR (Uncharacterized protein n=9 Tax=Saliceae TaxID=238069 RepID=A0A2K1ZW75_POPTR)

HSP 1 Score: 57.0 bits (136), Expect = 3.040e-5
Identity = 25/62 (40.32%), Postives = 34/62 (54.84%), Query Frame = 0
Query:    3 GEPVSCPICMCSVVRPTVTKCAHLFCRECISRELQRTPAFGMVQLPQAKCPICRRTMKGSEM 64
            GE   CPIC+C      +T+CAH+FCR CI + LQR             CP+CRR +  S++
Sbjct:  631 GEDFDCPICICPPTETVITRCAHIFCRPCILKTLQRAKQC---------CPLCRRPLSVSDL 683          
BLAST of mRNA_E_fasciculatus_S2_contig7457.15627.1 vs. uniprot
Match: A0A1S2XRF2_CICAR (putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2XRF2_CICAR)

HSP 1 Score: 56.6 bits (135), Expect = 3.950e-5
Identity = 26/62 (41.94%), Postives = 36/62 (58.06%), Query Frame = 0
Query:    3 GEPVSCPICMCSVVRPTVTKCAHLFCRECISRELQRTPAFGMVQLPQAKCPICRRTMKGSEM 64
            GE   CPIC+C      +T CAH+FCRECI + LQR+ +          CP+CRR +  S++
Sbjct:  569 GEDFDCPICLCPPSDIVITCCAHIFCRECILKTLQRSNSC---------CPLCRRPLSESDL 621          
BLAST of mRNA_E_fasciculatus_S2_contig7457.15627.1 vs. uniprot
Match: A0A2K3M6F5_TRIPR (DNA/RNA helicase n=2 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3M6F5_TRIPR)

HSP 1 Score: 55.1 bits (131), Expect = 4.530e-5
Identity = 25/62 (40.32%), Postives = 36/62 (58.06%), Query Frame = 0
Query:    3 GEPVSCPICMCSVVRPTVTKCAHLFCRECISRELQRTPAFGMVQLPQAKCPICRRTMKGSEM 64
            GE   CPIC+       +T CAH+FCRECI + LQR+          + CP+CRR++  S++
Sbjct:    5 GEDFDCPICLSPPTDIVITCCAHIFCRECILKTLQRS---------NSSCPLCRRSLSESDL 57          
BLAST of mRNA_E_fasciculatus_S2_contig7457.15627.1 vs. uniprot
Match: A0A067KZL5_JATCU (Uncharacterized protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067KZL5_JATCU)

HSP 1 Score: 56.2 bits (134), Expect = 5.350e-5
Identity = 25/62 (40.32%), Postives = 36/62 (58.06%), Query Frame = 0
Query:    3 GEPVSCPICMCSVVRPTVTKCAHLFCRECISRELQRTPAFGMVQLPQAKCPICRRTMKGSEM 64
            GE   CPIC+       +T+CAH+FCR CI + LQRT         +  CP+CRR++  S++
Sbjct:  624 GEDFDCPICISPPTDAVITRCAHIFCRACILKTLQRT---------KPSCPLCRRSLSTSDL 676          
BLAST of mRNA_E_fasciculatus_S2_contig7457.15627.1 vs. uniprot
Match: A0A091VCQ8_NIPNI (Helicase-like transcription factor (Fragment) n=1 Tax=Nipponia nippon TaxID=128390 RepID=A0A091VCQ8_NIPNI)

HSP 1 Score: 55.5 bits (132), Expect = 9.710e-5
Identity = 24/73 (32.88%), Postives = 41/73 (56.16%), Query Frame = 0
Query:    2 AGEPVSCPICMCSVVRPTVTKCAHLFCRECISRELQRTPAFGMVQLPQAKCPICRRTMKGSEMMELQTLSEVE 74
            +G    C +C+ S+  P +T+CAH+FC+ CIS  ++        + P AKCP+CR  ++   ++E     EV+
Sbjct:  721 SGSDEECAVCLESLTFPVITRCAHVFCKPCISEVIRS-------EQPNAKCPLCRNELRAEHLVECPLEGEVD 786          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7457.15627.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G2K8_ECTSI1.930e-6177.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHY1_9PHAE1.710e-2869.59Helicase C-terminal domain-containing protein n=1 ... [more]
A0A835YV89_9STRA3.700e-943.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4DH38_HETAK6.400e-948.48RING-type E3 ubiquitin transferase (Fragment) n=1 ... [more]
A0A2K1ZW75_POPTR3.040e-540.32Uncharacterized protein n=9 Tax=Saliceae TaxID=238... [more]
A0A1S2XRF2_CICAR3.950e-541.94putative SWI/SNF-related matrix-associated actin-d... [more]
A0A2K3M6F5_TRIPR4.530e-540.32DNA/RNA helicase n=2 Tax=Trifolium pratense TaxID=... [more]
A0A067KZL5_JATCU5.350e-540.32Uncharacterized protein n=1 Tax=Jatropha curcas Ta... [more]
A0A091VCQ8_NIPNI9.710e-532.88Helicase-like transcription factor (Fragment) n=1 ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 127..147
NoneNo IPR availablePANTHERPTHR47094FAMILY NOT NAMEDcoord: 7..61
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 5..59
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 8..55
e-value: 1.5E-7
score: 41.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 8..56
score: 11.988
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 2..96
e-value: 2.5E-14
score: 55.3
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 8..35
e-value: 4.6E-7
score: 29.7
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 23..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7457contigE_fasciculatus_S2_contig7457:58..2696 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7457.15627.1mRNA_E_fasciculatus_S2_contig7457.15627.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7457 58..7027 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7457.15627.1 ID=prot_E_fasciculatus_S2_contig7457.15627.1|Name=mRNA_E_fasciculatus_S2_contig7457.15627.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=338bp
MAGEPVSCPICMCSVVRPTVTKCAHLFCRECISRELQRTPAFGMVQLPQA
KCPICRRTMKGSEMMELQTLSEVEEAMAIDAPSTAENNRGDTGAVAAEGG
ATEASEGGGSSSSSSSSSSGSGNGKGKKKARREVEGFEDEKEEEAEEAIS
GDDHSHGTNAAEASASASNGTSASAAAPSDPAAATCGGGSSCGSSCGSSG
GGALSSSVSAAASSSGRSAVDPTSTSSRGPGEGSAGDPSSAAGGASAAGA
GSGAGSGGVVAGAAPAPAGDEDGVAGPSLVIPTFRFTPTATASFLSQYRA
ATSSQSSVKLDALVRDLDTTLLHDPAAKFVIFSQYPQV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017907Znf_RING_CS
IPR027370Znf-RING_LisH
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING