mRNA_E_fasciculatus_S2_contig7416.15591.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7416.15591.1 vs.
Match: JmjC (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYA0_ECTSI) HSP 1 Score: 323 bits (827), Expect = 1.230e-106 Identity = 174/184 (94.57%), Postives = 178/184 (96.74%), Query Frame = 1
Query: 1 MRPSGGAFAVGLASLGLASTHAFTGPALTTARSGSSSSSRSRVVASTAVSDSAVAPTAASAADEQYSPPQLVAALREASAQSPPLGVEGVFSAMARDDVFLNELWQKKPFFCDASLPSLAGQYTLDDVQQAVDSDFVEAGRGTFSQGSTGWRMAPVSTPRGKSFDDAKLRFDDVKSALKEKSGT 552
MRPS GAFAVGLASLG ASTHAFTGPALTTARSG SSSSR RVVASTAVSD+AVAP AASAADEQYSPPQLVAALRE SAQSPPLGVEG+FSAMARDDVF+NELWQKKPFFCDASLPSLAGQYTLDDVQQAVDSDFVEAGRGTFSQGSTGWRMAPVSTPRGKSF+DAKLRFDDVKSALKEKSGT
Sbjct: 1 MRPSRGAFAVGLASLGFASTHAFTGPALTTARSGCSSSSRWRVVASTAVSDTAVAPAAASAADEQYSPPQLVAALRETSAQSPPLGVEGIFSAMARDDVFVNELWQKKPFFCDASLPSLAGQYTLDDVQQAVDSDFVEAGRGTFSQGSTGWRMAPVSTPRGKSFEDAKLRFDDVKSALKEKSGT 184
BLAST of mRNA_E_fasciculatus_S2_contig7416.15591.1 vs.
Match: Bifunctional (lysine-specific demethylase and histidyl-hydroxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGT6_9PHAE) HSP 1 Score: 183 bits (465), Expect = 9.940e-53 Identity = 88/91 (96.70%), Postives = 91/91 (100.00%), Query Frame = 1
Query: 280 MARDDVFLNELWQKKPFFCDASLPSLAGQYTLDDVQQAVDSDFVEAGRGTFSQGSTGWRMAPVSTPRGKSFDDAKLRFDDVKSALKEKSGT 552
MARDDVF+NELWQKKPFFCDASLPSLAGQYTLDDVQQAVDSDFVEAGRGTFSQGSTGWRMAPVSTPRGKSF+DAKLRFDDVK+ALKEKSGT
Sbjct: 1 MARDDVFVNELWQKKPFFCDASLPSLAGQYTLDDVQQAVDSDFVEAGRGTFSQGSTGWRMAPVSTPRGKSFEDAKLRFDDVKNALKEKSGT 91
BLAST of mRNA_E_fasciculatus_S2_contig7416.15591.1 vs.
Match: Bifunctional (lysine-specific demethylase and histidyl-hydroxylase (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WNN0_EMIHU) HSP 1 Score: 92.4 bits (228), Expect = 1.230e-19 Identity = 43/88 (48.86%), Postives = 60/88 (68.18%), Query Frame = 1
Query: 271 FSAMARDDVFLNELWQKKPFFCDASLPSLAGQYTLDDVQQAVDSDFVEAGRGTFSQGSTGWRMAPVSTPRGKSFDDAKLRFDDVKSAL 534
F +ARD F+ ++W +KP + +AG +TLDDV++AVDSDF+EAG G GW+MAPVS PRG S++DAKLR+ DV + +
Sbjct: 82 FEVLARDADFVADVWARKPLLVAEPIAGVAGSFTLDDVREAVDSDFLEAGLGV-PTAEGGWKMAPVSQPRGSSYEDAKLRYVDVAAGI 168
BLAST of mRNA_E_fasciculatus_S2_contig7416.15591.1 vs.
Match: JmjC (domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BJP6_EMIHU) HSP 1 Score: 92.4 bits (228), Expect = 2.780e-19 Identity = 43/88 (48.86%), Postives = 60/88 (68.18%), Query Frame = 1
Query: 271 FSAMARDDVFLNELWQKKPFFCDASLPSLAGQYTLDDVQQAVDSDFVEAGRGTFSQGSTGWRMAPVSTPRGKSFDDAKLRFDDVKSAL 534
F +ARD F+ ++W +KP + +AG +TLDDV++AVDSDF+EAG G GW+MAPVS PRG S++DAKLR+ DV + +
Sbjct: 62 FEVLARDADFVADVWARKPLLVAEPIAGVAGSFTLDDVREAVDSDFLEAGLGV-PTAEGGWKMAPVSQPRGSSYEDAKLRYVDVAAGI 148
BLAST of mRNA_E_fasciculatus_S2_contig7416.15591.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CTT2_9EUKA) HSP 1 Score: 85.5 bits (210), Expect = 2.000e-17 Identity = 42/89 (47.19%), Postives = 61/89 (68.54%), Query Frame = 1
Query: 271 FSAMARDDVFLNELWQKKPFFCDASLPSLAGQYTLDDVQQAVDSDFVEAGRGTFSQGSTGWRMAPVSTPRGKSFDDAKLRFDDVKSALK 537
F ++AR F +++ ++P +P +A +TLD +++AVDSDF+EAGRG G GW+MAPVS PRG SF+DAK+R+ DV A+K
Sbjct: 27 FLSLARSTEFARDIFARQPMLY-GGIPGVADSFTLDHLREAVDSDFLEAGRGIPDNG--GWKMAPVSKPRGSSFEDAKMRYVDVVEAMK 112
BLAST of mRNA_E_fasciculatus_S2_contig7416.15591.1 vs.
Match: Bifunctional (lysine-specific demethylase and histidyl-hydroxylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSI8_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 2.350e-17 Identity = 49/113 (43.36%), Postives = 72/113 (63.72%), Query Frame = 1
Query: 223 LREASAQSPPLGVEGVFSAM-ARDDVFLNELWQKKPFFCDASLPSLAGQYTLDDVQQAVDSDFVEAGRGTFSQGST--GWRMAPVSTPRGKSFDDAKLRFDDVKSALKEKSGT 552
L EA L ++ VF A+ A FL + WQ+ P F S+P LA +T+ D+++A+ +F+ AGRG F + S GW+MA V RG SF++AKLR +DV++ALK++SGT
Sbjct: 81 LVEADTGCDKLDLKRVFEALTAPSSPFLAKYWQRAPCFTSTSIPCLAQAWTMADMEEAIAKEFLLAGRGFFEENSETGGWKMAAVGLARGSSFEEAKLRPEDVRAALKQRSGT 193
BLAST of mRNA_E_fasciculatus_S2_contig7416.15591.1 vs.
Match: Bifunctional (lysine-specific demethylase and histidyl-hydroxylase n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYX3_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 3.580e-17 Identity = 44/107 (41.12%), Postives = 68/107 (63.55%), Query Frame = 1
Query: 235 SAQSPPLGVEGVFSAMARDDVFLNELWQKKPFFCDASLPSLAGQYTLDDVQQAVDSDFVEAGRGTFSQ-GSTGWRMAPVSTPRGKSFDDAKLRFDDVKSALKEKSGT 552
SAQ+ PL V F A+A F ++WQ++PF P++ G YT+ D+++AV+ DF+EAGRG + G GW+MA V +GK+ K++ +DV+ AL ++SGT
Sbjct: 82 SAQATPLDVTAAFRALANTAQFGQDVWQQEPFVFSEGFPNMVGAYTMLDIEEAVEEDFLEAGRGLVDEDGRAGWQMARVG--KGKASSPKKMKVEDVRKALSQRSGT 186
BLAST of mRNA_E_fasciculatus_S2_contig7416.15591.1 vs.
Match: Bifunctional (lysine-specific demethylase and histidyl-hydroxylase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YZE1_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 9.410e-9 Identity = 27/66 (40.91%), Postives = 48/66 (72.73%), Query Frame = 1
Query: 337 DASLPSLAGQYTLDDVQQAVDSDFVEAGRGTFSQGSTGWRMAPVSTPRGKSFDDAKLRFDDVKSAL 534
+ S ++AG +T DD+ +A++ DF++A RG+ + GW++ VSTPRG SF+DA++ ++V++AL
Sbjct: 167 EESASTIAGYFTFDDLAKALEEDFLDADRGS-TDNKKGWKVTAVSTPRGSSFEDARMTLEEVEAAL 231
BLAST of mRNA_E_fasciculatus_S2_contig7416.15591.1 vs.
Match: Bifunctional (lysine-specific demethylase and histidyl-hydroxylase (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MKV5_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 2.180e-8 Identity = 28/66 (42.42%), Postives = 45/66 (68.18%), Query Frame = 1
Query: 337 DASLPSLAGQYTLDDVQQAVDSDFVEAGRGTFSQGSTGWRMAPVSTPRGKSFDDAKLRFDDVKSAL 534
D +L L G +T DD+ A++ DF++A RG+ + GW++ VSTPRG SF+DA++ +V++AL
Sbjct: 51 DETLSPLKGYFTYDDLATALEEDFLDADRGS-TDNKKGWKVTSVSTPRGSSFEDARMTLSEVETAL 115
BLAST of mRNA_E_fasciculatus_S2_contig7416.15591.1 vs.
Match: Bifunctional (lysine-specific demethylase and histidyl-hydroxylase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XAD1_DIALT) HSP 1 Score: 62.8 bits (151), Expect = 3.010e-8 Identity = 29/75 (38.67%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 313 WQKKPFFCDASLPSLAGQYTLDDVQQAVDSDFVEAGRGTF-SQGSTGWRMAPVSTPRGKSFDDAKLRFDDVKSAL 534
WQ+ P A P G +T+ + AV+ +F++AG G + ++G GW+M V TPRG SF++AKL + +V++A+
Sbjct: 74 WQRAPLVTRALAPLADGYFTVAHLAAAVERNFLDAGLGVYDARGRAGWQMGRVGTPRGASFEEAKLTWAEVEAAM 148 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7416.15591.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7416.15591.1 >prot_E_fasciculatus_S2_contig7416.15591.1 ID=prot_E_fasciculatus_S2_contig7416.15591.1|Name=mRNA_E_fasciculatus_S2_contig7416.15591.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=184bp MRPSGGAFAVGLASLGLASTHAFTGPALTTARSGSSSSSRSRVVASTAVSback to top mRNA from alignment at E_fasciculatus_S2_contig7416:462..2916- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7416.15591.1 ID=mRNA_E_fasciculatus_S2_contig7416.15591.1|Name=mRNA_E_fasciculatus_S2_contig7416.15591.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2455bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7416:462..2916- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7416:462..2916- >mRNA_E_fasciculatus_S2_contig7416.15591.1 ID=mRNA_E_fasciculatus_S2_contig7416.15591.1|Name=mRNA_E_fasciculatus_S2_contig7416.15591.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=552bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7416:462..2916- (Ectocarpus fasciculatus EfasUO2)back to top |