prot_E_fasciculatus_S2_contig7244.15434.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig7244.15434.1
Unique Name	prot_E_fasciculatus_S2_contig7244.15434.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	156

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig7244.15434.1 vs. uniprot
Match: D7FJD1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJD1_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 1.110e-94
Identity = 138/155 (89.03%), Postives = 146/155 (94.19%), Query Frame = 0

Query:    1 MMMASLTGSWALDVHRSDTLEAYLRCMGAPGGVIEAQLAGEQACQSRNVLVLEGSSLVVHKHTSVNNFTESYELDQERVTPTTYGEKRAIASLLQPGRHDALVIKTALPTDSCNFGLVETRRLVGDGSTHIQELLLRNLDTGAQSITRRTWVREP 155
            MMM+SLTG+W LDV+RSDTLEAYLRCMGAP  V+EAQLAGEQAC SRNVLVL+ S LVVHKHTSVNN TESYELDQERVTP+TYGEKRAIASLLQPGRHDAL IKTALPTD+ +FGLVETRRLVGDGSTHIQELLLRNLDTGAQSITRRTWVREP
Sbjct:    1 MMMSSLTGAWVLDVYRSDTLEAYLRCMGAPDRVVEAQLAGEQACPSRNVLVLDDSRLVVHKHTSVNNLTESYELDQERVTPSTYGEKRAIASLLQPGRHDALAIKTALPTDTSDFGLVETRRLVGDGSTHIQELLLRNLDTGAQSITRRTWVREP 155

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig7244.15434.1 vs. uniprot
Match: D8LID1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LID1_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 2.000e-13
Identity = 46/133 (34.59%), Postives = 62/133 (46.62%), Query Frame = 0

Query:   38 LAGEQACQSRNVLVLEGSSLVVHKHTSVNNFTESYELDQERVTPTTYGEK-------------RAIASLLQPGRHDALVIKT--ALPTDSCNFGLVETRRLVGDGSTHIQELLLRNLDTGAQSITRRTWVREP 155
            + GE+  QSRNV+ L  S LV+HK T++NNFTE +ELD+E+VTP     +             +   SL +  + D  V+ T  + P        VE R+L   G THIQ                R WVR P
Sbjct:   12 VTGEREYQSRNVIALHASELVIHKKTAINNFTERFELDEEQVTPARPWNRPQHGGXXXXXXVNQVTVSLGESEQLDGYVVATTTSAPNGRPTVETVEVRQLTDGGLTHIQXXXXXXXXXXXXXXXXRVWVRVP 144

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig7244.15434.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig7244.15434.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FJD1_ECTSI	1.110e-94	89.03	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LID1_ECTSI	2.000e-13	34.59	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 13..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..12
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..16
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 17..155
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig7244	contig	E_fasciculatus_S2_contig7244:3338..6061 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig7244.15434.1	mRNA_E_fasciculatus_S2_contig7244.15434.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig7244 3338..6061 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig7244.15434.1 ID=prot_E_fasciculatus_S2_contig7244.15434.1|Name=mRNA_E_fasciculatus_S2_contig7244.15434.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=156bp
MMMASLTGSWALDVHRSDTLEAYLRCMGAPGGVIEAQLAGEQACQSRNVL
VLEGSSLVVHKHTSVNNFTESYELDQERVTPTTYGEKRAIASLLQPGRHD
ALVIKTALPTDSCNFGLVETRRLVGDGSTHIQELLLRNLDTGAQSITRRT
WVREP*