prot_E_fasciculatus_S2_contig7236.15424.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7236.15424.1
Unique Nameprot_E_fasciculatus_S2_contig7236.15424.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length364
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7236.15424.1 vs. uniprot
Match: A0A6H5KWW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWW8_9PHAE)

HSP 1 Score: 432 bits (1112), Expect = 9.010e-149
Identity = 268/363 (73.83%), Postives = 276/363 (76.03%), Query Frame = 0
Query:    1 MFVSARWQRNALRLVASVLFFESALSFAPPAVQRQPALFCSSSPLILPAATGALQRRSSSNGASFWPGRAAVAGYRHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVADAAADGDAQSSKAQTPQVPPKTGAMQAXXXXXXXXXXXXXXDSDFLFEQKLESVRAAVLCGSVGAASRLLAVGAGALLPGALLREALAAPEPAGSSLLFGLAAGFAQGALFGLTYRYVVRSDREQSPSAAATATAEEEPPVPQMDGFTVGHLGDGCVAAFALTSALGQSEAPLTLAAGEFVGVLGRGGGIVEALAAVLLPAAPFLPRAAADLFLYSATRAALDRALDEGVIKPFP 363
            MFVSARWQRNA+R VAS+LFFESALSFAPP VQ+QPAL  SS PL+LPA T  LQRRSSSNG+S WP RAAVAGYRHR                                              V    A   GDAQSSKAQT QVPPKTGA Q       XXXXXXX DSDFLFEQKLESVRAAVLCGSVGA SRLLAVGAG LLPG L REALAAPEPAGSSLLFGLAAGFAQGALFGLTYRYVVRSDREQSPSA        EPPVPQMDGFTVGHLGDGCVAAFALTSALGQSEAPLTLAAGEFVGVLGRGGGI+EALAAVLLPAAPFLPRAAADLFLY+A R A+DRALDEGVIKPFP
Sbjct:    1 MFVSARWQRNAVRFVASILFFESALSFAPPPVQQQPALSWSS-PLLLPA-TATLQRRSSSNGSSLWPARAAVAGYRHRQRHRGAASQQTPRLAMSSSAGRNGAAPERGDGAAANIASAAGGAFGV----ADEPGDAQSSKAQT-QVPPKTGATQTGQASRRXXXXXXX-DSDFLFEQKLESVRAAVLCGSVGATSRLLAVGAGGLLPGGLFREALAAPEPAGSSLLFGLAAGFAQGALFGLTYRYVVRSDREQSPSATTG-----EPPVPQMDGFTVGHLGDGCVAAFALTSALGQSEAPLTLAAGEFVGVLGRGGGILEALAAVLLPAAPFLPRAAADLFLYTAARLAIDRALDEGVIKPFP 350          
BLAST of mRNA_E_fasciculatus_S2_contig7236.15424.1 vs. uniprot
Match: D8LP08_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP08_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 9.620e-102
Identity = 181/212 (85.38%), Postives = 183/212 (86.32%), Query Frame = 0
Query:  134 GDAQSSKAQTPQVPPKTGAMQAXXXXXXXXXXXXXXDSDFLFEQKLESVRAAVLCGSVGAASRLLAVGAGALLPGALLREALAAPEPAGSSLLFGLAAGFAQGALFGLTYRYVVRSDREQSPSAAATATAEEEPPVPQMDGFTVGHLGDGCVAAFALTSALGQSEAPLTLAAGEFVGVLGRGGGIVEALAAVLLPAAPFLPRAAADLFLYSA 345
            GDAQSS AQT QVPPKTGA Q               DSDFLFEQKLESVRAAVLCGSVGAASRLLAVGAGALLPG LLREALAAPEPAGSSLLFGLAAGFAQGALFGLTYRYVVRSDREQSPSA        EPPVPQMDGFTVGHLGDGCVAAFALTSALGQSEAPLTLAAGEFV VL RGGGI+EALAAVLLPAAPFLPRAAADLFLYS+
Sbjct:   36 GDAQSSIAQT-QVPPKTGATQTGQASRCRRQQHHH-DSDFLFEQKLESVRAAVLCGSVGAASRLLAVGAGALLPGGLLREALAAPEPAGSSLLFGLAAGFAQGALFGLTYRYVVRSDREQSPSATTG-----EPPVPQMDGFTVGHLGDGCVAAFALTSALGQSEAPLTLAAGEFVRVLWRGGGILEALAAVLLPAAPFLPRAAADLFLYSS 240          
BLAST of mRNA_E_fasciculatus_S2_contig7236.15424.1 vs. uniprot
Match: A0A7S3URH4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URH4_HETAK)

HSP 1 Score: 55.8 bits (133), Expect = 9.730e-6
Identity = 63/178 (35.39%), Postives = 76/178 (42.70%), Query Frame = 0
Query:  202 AGALLPGALLREALAAPEPAGSSLLFGLAAGFAQGALFGLTYRYVVRSDREQSPSAAATATAEEEPPVPQMDGFTVGHLGDGCVAAFALTSALGQSEAPLTLAAGEFV-----------------GVLGRGGGIVEALAAVLLPAAP---FLPRAAADLFLYSATRAALDRALDEGVI 359
            A AL P  LL   +A P  A + L+  L  G A+GALFGL YRYVVR D  +              P P + GF+V  LGDG V++FALTS L  ++  L   A  FV                 G L   G +  AL             L  AA     +   R ALDRAL  G I
Sbjct:    7 AAALNPSLLL---VARPASAAADLV-ALGGGAAEGALFGLLYRYVVRGDLTR--------------PDPGL-GFSVKQLGDGVVSSFALTSVLAHNQENLVKVAEVFVLSLPTAISDLTSVPEGGGALAAAGDVARALXXXXXXXXXXXXLLRDAAVAWLSFGLCREALDRALLSGAI 165          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7236.15424.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KWW8_9PHAE9.010e-14973.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LP08_ECTSI9.620e-10285.38Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7S3URH4_HETAK9.730e-635.39Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..54
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 55..183
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 206..224
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 184..205
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..35
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 247..363
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 225..246
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.673
NoneNo IPR availableTMHMMTMhelixcoord: 221..243
NoneNo IPR availableTMHMMTMhelixcoord: 184..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7236contigE_fasciculatus_S2_contig7236:3186..6817 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7236.15424.1mRNA_E_fasciculatus_S2_contig7236.15424.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7236 3155..7653 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7236.15424.1 ID=prot_E_fasciculatus_S2_contig7236.15424.1|Name=mRNA_E_fasciculatus_S2_contig7236.15424.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=364bp
MFVSARWQRNALRLVASVLFFESALSFAPPAVQRQPALFCSSSPLILPAA
TGALQRRSSSNGASFWPGRAAVAGYRHRQRRRGAASQQTPPSLAMSLAAG
RDGAAPERGDGGAAAGASSAGGGAVDVADAAADGDAQSSKAQTPQVPPKT
GAMQAAQASRRRRQQQHHHDSDFLFEQKLESVRAAVLCGSVGAASRLLAV
GAGALLPGALLREALAAPEPAGSSLLFGLAAGFAQGALFGLTYRYVVRSD
REQSPSAAATATAEEEPPVPQMDGFTVGHLGDGCVAAFALTSALGQSEAP
LTLAAGEFVGVLGRGGGIVEALAAVLLPAAPFLPRAAADLFLYSATRAAL
DRALDEGVIKPFP*
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