prot_E_fasciculatus_S2_contig7233.15420.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7233.15420.1
Unique Nameprot_E_fasciculatus_S2_contig7233.15420.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length113
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7233.15420.1 vs. uniprot
Match: D8LC26_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC26_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 6.140e-72
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0
Query:    1 MITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIVQEEEG 112
            MITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIVQE+EG
Sbjct:   78 MITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIVQEDEG 189          
BLAST of mRNA_E_fasciculatus_S2_contig7233.15420.1 vs. uniprot
Match: W7TGP7_9STRA (60s ribosomal protein l9 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGP7_9STRA)

HSP 1 Score: 181 bits (458), Expect = 6.800e-56
Identity = 87/107 (81.31%), Postives = 100/107 (93.46%), Query Frame = 0
Query:    1 MITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIV 107
            ++TGVTKG+LY+MRF YAHFPINVS+T KTVE+RNFLGEKRVRRVEL PGV+YVR+SDVKDQIEL GND+ AVS+TAARIQQ T+VKRKDIRKFLDGIYVS+K +IV
Sbjct:   86 LMTGVTKGFLYRMRFVYAHFPINVSLTDKTVEVRNFLGEKRVRRVELLPGVEYVRSSDVKDQIELKGNDLTAVSLTAARIQQCTTVKRKDIRKFLDGIYVSQKTHIV 192          
BLAST of mRNA_E_fasciculatus_S2_contig7233.15420.1 vs. uniprot
Match: A0A836CAK5_9STRA (Ribosomal protein L6, alpha-beta domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAK5_9STRA)

HSP 1 Score: 176 bits (446), Expect = 3.880e-54
Identity = 87/110 (79.09%), Postives = 97/110 (88.18%), Query Frame = 0
Query:    1 MITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIVQEE 110
            +ITGVTKG+LYKMRFCYAHFPINV++T +TVEIRNFLGEKRVRRV L  GVDYVR++ +KDQIELSGNDI  VS  AARI Q+ +VK KDIRKFLDGIYVSEK NIVQEE
Sbjct:   79 LITGVTKGFLYKMRFCYAHFPINVTLTDRTVEIRNFLGEKRVRRVVLCDGVDYVRSTTIKDQIELSGNDIADVSNMAARISQACTVKNKDIRKFLDGIYVSEKTNIVQEE 188          
BLAST of mRNA_E_fasciculatus_S2_contig7233.15420.1 vs. uniprot
Match: A0A7R9YBB6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBB6_9STRA)

HSP 1 Score: 173 bits (439), Expect = 4.350e-53
Identity = 87/111 (78.38%), Postives = 97/111 (87.39%), Query Frame = 0
Query:    1 MITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIVQEEE 111
            MITGVTKG+LYKMRFCYAHFPI V+I G+ VEIRNFLGEKRVR+V L  GVD +RT  VKDQIELSGNDI AVS+TAARIQQ+T V+ KDIRKFLDGIYVSEK  IVQ+E+
Sbjct:   78 MITGVTKGFLYKMRFCYAHFPIIVAIEGRNVEIRNFLGEKRVRKVALMEGVDALRTESVKDQIELSGNDIVAVSLTAARIQQATRVRNKDIRKFLDGIYVSEKGTIVQDED 188          
BLAST of mRNA_E_fasciculatus_S2_contig7233.15420.1 vs. uniprot
Match: A0A7S2XV97_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV97_9STRA)

HSP 1 Score: 171 bits (434), Expect = 2.500e-52
Identity = 84/103 (81.55%), Postives = 95/103 (92.23%), Query Frame = 0
Query:    1 MITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEK 103
            MITGVTKG+LYKMRF YAHFPINV++  +TVEIRNFLGEKRVRRVEL  GV YVRTS+VKDQIEL+GND+ AVS+TAA+IQQST+VK KDIRKFLDGIYVS+K
Sbjct:   85 MITGVTKGFLYKMRFVYAHFPINVTLVDRTVEIRNFLGEKRVRRVELMEGVTYVRTSNVKDQIELTGNDLTAVSLTAAQIQQSTTVKNKDIRKFLDGIYVSQK 187          
BLAST of mRNA_E_fasciculatus_S2_contig7233.15420.1 vs. uniprot
Match: A0A7S1U0E8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0E8_9STRA)

HSP 1 Score: 171 bits (434), Expect = 3.730e-52
Identity = 87/111 (78.38%), Postives = 96/111 (86.49%), Query Frame = 0
Query:    1 MITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIVQEEE 111
            MITGVTKG+LYKMRFCYAHFPI V+I  + VEIRNFLGEKRVRRV L  GVD VRT +VKDQIELSGNDI AVS+TAARIQQ+T V+ KDIRKFLDGIYVSEK  IV +E+
Sbjct:   91 MITGVTKGFLYKMRFCYAHFPIIVAIEQRNVEIRNFLGEKRVRRVALLDGVDAVRTDNVKDQIELSGNDIVAVSLTAARIQQATRVRNKDIRKFLDGIYVSEKTTIVLDED 201          
BLAST of mRNA_E_fasciculatus_S2_contig7233.15420.1 vs. uniprot
Match: A0A7S2GU27_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GU27_9STRA)

HSP 1 Score: 167 bits (424), Expect = 7.780e-51
Identity = 79/103 (76.70%), Postives = 95/103 (92.23%), Query Frame = 0
Query:    1 MITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEK 103
            M  GVT+G+LYKMRF Y+HFPINV+++G TVEIRNFLGEKRVR+VEL  GV+YVR++DVKDQIELSGNDI AVS+TAARIQQ+T+++ KD+RKFLDGIYVSEK
Sbjct:   78 MFVGVTQGFLYKMRFVYSHFPINVALSGNTVEIRNFLGEKRVRKVELLEGVNYVRSADVKDQIELSGNDIAAVSLTAARIQQATNIRHKDLRKFLDGIYVSEK 180          
BLAST of mRNA_E_fasciculatus_S2_contig7233.15420.1 vs. uniprot
Match: A0A7S1BA91_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BA91_9STRA)

HSP 1 Score: 167 bits (424), Expect = 8.280e-51
Identity = 77/103 (74.76%), Postives = 97/103 (94.17%), Query Frame = 0
Query:    1 MITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEK 103
            M+TGVT+G++YKMRF Y+HFPINV+++G+ VEIRNFLGEKRVR+V+L PGV +VRT+DVKDQIELSGNDI AVS+T A+IQQ+T+V++KD+RKFLDGIYVSEK
Sbjct:   79 MMTGVTRGFIYKMRFVYSHFPINVNLSGENVEIRNFLGEKRVRKVQLLPGVTFVRTADVKDQIELSGNDINAVSLTCAQIQQATNVRKKDLRKFLDGIYVSEK 181          
BLAST of mRNA_E_fasciculatus_S2_contig7233.15420.1 vs. uniprot
Match: A0A7S2RBQ4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RBQ4_9STRA)

HSP 1 Score: 166 bits (421), Expect = 2.290e-50
Identity = 81/110 (73.64%), Postives = 95/110 (86.36%), Query Frame = 0
Query:    1 MITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIVQEE 110
            M  GV +GYLYKMRF Y+HFPINV++ G+ VEIRNFLGEKRVR+V+L PGV YVR+ DVKDQIELSGNDI  VS+TAA+IQQSTSV+ KD+RKFLDGIYVSEK  I +E+
Sbjct:   78 MFVGVNQGYLYKMRFVYSHFPINVTLAGENVEIRNFLGEKRVRKVKLGPGVTYVRSDDVKDQIELSGNDIALVSLTAAQIQQSTSVRHKDLRKFLDGIYVSEKGPIPKED 187          
BLAST of mRNA_E_fasciculatus_S2_contig7233.15420.1 vs. uniprot
Match: A0A7R9W890_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W890_9STRA)

HSP 1 Score: 166 bits (421), Expect = 2.440e-50
Identity = 83/110 (75.45%), Postives = 92/110 (83.64%), Query Frame = 0
Query:    1 MITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIVQEE 110
            M  GVT+G+ YKMRF Y+HFPINVS+ GKTVEIRNFLGEKRVR+VEL  GV YVRT+DVKDQIELSGNDI  VS+TAARIQQ T+   KD+RKFLDGIYVSEK  I  EE
Sbjct:   80 MFVGVTQGFCYKMRFVYSHFPINVSLNGKTVEIRNFLGEKRVRKVELCDGVQYVRTADVKDQIELSGNDIAMVSLTAARIQQCTNTTNKDLRKFLDGIYVSEKGKIEIEE 189          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7233.15420.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC26_ECTSI6.140e-7299.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TGP7_9STRA6.800e-5681.3160s ribosomal protein l9 n=2 Tax=Monodopsidaceae T... [more]
A0A836CAK5_9STRA3.880e-5479.09Ribosomal protein L6, alpha-beta domain-containing... [more]
A0A7R9YBB6_9STRA4.350e-5378.38Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2XV97_9STRA2.500e-5281.55Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S1U0E8_9STRA3.730e-5278.38Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2GU27_9STRA7.780e-5176.70Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
A0A7S1BA91_9STRA8.280e-5174.76Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S2RBQ4_9STRA2.290e-5073.64Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7R9W890_9STRA2.440e-5075.45Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020040Ribosomal protein L6, alpha-beta domainPFAMPF00347Ribosomal_L6coord: 20..97
e-value: 2.5E-13
score: 50.5
IPR036789Ribosomal protein L6, alpha-beta domain superfamilyGENE3D3.90.930.12coord: 9..110
e-value: 5.6E-42
score: 144.0
IPR036789Ribosomal protein L6, alpha-beta domain superfamilySUPERFAMILY56053Ribosomal protein L6coord: 9..103
NoneNo IPR availablePANTHERPTHR11655:SF1660S RIBOSOMAL PROTEIN L9-RELATEDcoord: 1..107
IPR000702Ribosomal protein L6PANTHERPTHR1165560S/50S RIBOSOMAL PROTEIN L6/L9coord: 1..107
IPR002359Ribosomal protein L6, conserved site-2PROSITEPS00700RIBOSOMAL_L6_2coord: 82..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7233contigE_fasciculatus_S2_contig7233:161..2415 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7233.15420.1mRNA_E_fasciculatus_S2_contig7233.15420.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7233 119..2500 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7233.15420.1 ID=prot_E_fasciculatus_S2_contig7233.15420.1|Name=mRNA_E_fasciculatus_S2_contig7233.15420.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=113bp
MITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPG
VDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYV
SEKLNIVQEEEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002359Ribosomal_L6_CS2
IPR000702Ribosomal_L6
IPR036789Ribosomal_L6_a/b-dom_sf
IPR020040Ribosomal_L6_a/b-dom