mRNA_E_fasciculatus_S2_contig7233.15420.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7233.15420.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC26_ECTSI) HSP 1 Score: 251 bits (640), Expect = 6.390e-83 Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 1
Query: 1 QLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIVQEEEG 378
QLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIVQE+EG
Sbjct: 64 QLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIVQEDEG 189
BLAST of mRNA_E_fasciculatus_S2_contig7233.15420.1 vs.
Match: 60s (ribosomal protein l9 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGP7_9STRA) HSP 1 Score: 207 bits (526), Expect = 1.670e-65 Identity = 98/121 (80.99%), Postives = 113/121 (93.39%), Query Frame = 1
Query: 1 QLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIV 363
QLA IRT+CSH+EN++TGVTKG+LY+MRF YAHFPINVS+T KTVE+RNFLGEKRVRRVEL PGV+YVR+SDVKDQIEL GND+ AVS+TAARIQQ T+VKRKDIRKFLDGIYVS+K +IV
Sbjct: 72 QLATIRTVCSHIENLMTGVTKGFLYRMRFVYAHFPINVSLTDKTVEVRNFLGEKRVRRVELLPGVEYVRSSDVKDQIELKGNDLTAVSLTAARIQQCTTVKRKDIRKFLDGIYVSQKTHIV 192
BLAST of mRNA_E_fasciculatus_S2_contig7233.15420.1 vs.
Match: Ribosomal (protein L6, alpha-beta domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAK5_9STRA) HSP 1 Score: 206 bits (523), Expect = 4.070e-65 Identity = 99/124 (79.84%), Postives = 111/124 (89.52%), Query Frame = 1
Query: 1 QLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIVQEE 372
QLACIRT+CSH+EN+ITGVTKG+LYKMRFCYAHFPINV++T +TVEIRNFLGEKRVRRV L GVDYVR++ +KDQIELSGNDI VS AARI Q+ +VK KDIRKFLDGIYVSEK NIVQEE
Sbjct: 65 QLACIRTVCSHIENLITGVTKGFLYKMRFCYAHFPINVTLTDRTVEIRNFLGEKRVRRVVLCDGVDYVRSTTIKDQIELSGNDIADVSNMAARISQACTVKNKDIRKFLDGIYVSEKTNIVQEE 188
BLAST of mRNA_E_fasciculatus_S2_contig7233.15420.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV97_9STRA) HSP 1 Score: 201 bits (510), Expect = 3.730e-63 Identity = 97/117 (82.91%), Postives = 109/117 (93.16%), Query Frame = 1
Query: 1 QLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEK 351
QLACIRTICSH+ENMITGVTKG+LYKMRF YAHFPINV++ +TVEIRNFLGEKRVRRVEL GV YVRTS+VKDQIEL+GND+ AVS+TAA+IQQST+VK KDIRKFLDGIYVS+K
Sbjct: 71 QLACIRTICSHIENMITGVTKGFLYKMRFVYAHFPINVTLVDRTVEIRNFLGEKRVRRVELMEGVTYVRTSNVKDQIELTGNDLTAVSLTAAQIQQSTTVKNKDIRKFLDGIYVSQK 187
BLAST of mRNA_E_fasciculatus_S2_contig7233.15420.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBB6_9STRA) HSP 1 Score: 200 bits (509), Expect = 5.290e-63 Identity = 98/125 (78.40%), Postives = 110/125 (88.00%), Query Frame = 1
Query: 1 QLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIVQEEE 375
Q ACIRT+CSH+ENMITGVTKG+LYKMRFCYAHFPI V+I G+ VEIRNFLGEKRVR+V L GVD +RT VKDQIELSGNDI AVS+TAARIQQ+T V+ KDIRKFLDGIYVSEK IVQ+E+
Sbjct: 64 QRACIRTVCSHIENMITGVTKGFLYKMRFCYAHFPIIVAIEGRNVEIRNFLGEKRVRKVALMEGVDALRTESVKDQIELSGNDIVAVSLTAARIQQATRVRNKDIRKFLDGIYVSEKGTIVQDED 188
BLAST of mRNA_E_fasciculatus_S2_contig7233.15420.1 vs.
Match: Hypothetical (protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0E8_9STRA) HSP 1 Score: 199 bits (505), Expect = 3.250e-62 Identity = 99/125 (79.20%), Postives = 109/125 (87.20%), Query Frame = 1
Query: 1 QLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIVQEEE 375
Q ACIRT+CSHVENMITGVTKG+LYKMRFCYAHFPI V+I + VEIRNFLGEKRVRRV L GVD VRT +VKDQIELSGNDI AVS+TAARIQQ+T V+ KDIRKFLDGIYVSEK IV +E+
Sbjct: 77 QRACIRTVCSHVENMITGVTKGFLYKMRFCYAHFPIIVAIEQRNVEIRNFLGEKRVRRVALLDGVDAVRTDNVKDQIELSGNDIVAVSLTAARIQQATRVRNKDIRKFLDGIYVSEKTTIVLDED 201
BLAST of mRNA_E_fasciculatus_S2_contig7233.15420.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BA91_9STRA) HSP 1 Score: 197 bits (500), Expect = 1.230e-61 Identity = 91/124 (73.39%), Postives = 114/124 (91.94%), Query Frame = 1
Query: 1 QLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIVQEE 372
QLAC+RTICSH+ENM+TGVT+G++YKMRF Y+HFPINV+++G+ VEIRNFLGEKRVR+V+L PGV +VRT+DVKDQIELSGNDI AVS+T A+IQQ+T+V++KD+RKFLDGIYVSEK I +E
Sbjct: 65 QLACVRTICSHIENMMTGVTRGFIYKMRFVYSHFPINVNLSGENVEIRNFLGEKRVRKVQLLPGVTFVRTADVKDQIELSGNDINAVSLTCAQIQQATNVRKKDLRKFLDGIYVSEKGAIDVDE 188
BLAST of mRNA_E_fasciculatus_S2_contig7233.15420.1 vs.
Match: Hypothetical (protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W890_9STRA) HSP 1 Score: 196 bits (498), Expect = 2.570e-61 Identity = 95/124 (76.61%), Postives = 106/124 (85.48%), Query Frame = 1
Query: 1 QLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIVQEE 372
QLAC+RTICSH+ENM GVT+G+ YKMRF Y+HFPINVS+ GKTVEIRNFLGEKRVR+VEL GV YVRT+DVKDQIELSGNDI VS+TAARIQQ T+ KD+RKFLDGIYVSEK I EE
Sbjct: 66 QLACVRTICSHIENMFVGVTQGFCYKMRFVYSHFPINVSLNGKTVEIRNFLGEKRVRKVELCDGVQYVRTADVKDQIELSGNDIAMVSLTAARIQQCTNTTNKDLRKFLDGIYVSEKGKIEIEE 189
BLAST of mRNA_E_fasciculatus_S2_contig7233.15420.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GU27_9STRA) HSP 1 Score: 195 bits (496), Expect = 4.690e-61 Identity = 90/117 (76.92%), Postives = 109/117 (93.16%), Query Frame = 1
Query: 1 QLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEK 351
QLAC+RTICSH++NM GVT+G+LYKMRF Y+HFPINV+++G TVEIRNFLGEKRVR+VEL GV+YVR++DVKDQIELSGNDI AVS+TAARIQQ+T+++ KD+RKFLDGIYVSEK
Sbjct: 64 QLACVRTICSHIDNMFVGVTQGFLYKMRFVYSHFPINVALSGNTVEIRNFLGEKRVRKVELLEGVNYVRSADVKDQIELSGNDIAAVSLTAARIQQATNIRHKDLRKFLDGIYVSEK 180
BLAST of mRNA_E_fasciculatus_S2_contig7233.15420.1 vs.
Match: Hypothetical (protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RBQ4_9STRA) HSP 1 Score: 194 bits (494), Expect = 9.760e-61 Identity = 91/124 (73.39%), Postives = 109/124 (87.90%), Query Frame = 1
Query: 1 QLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIVQEE 372
+LAC+RT+CSH+ENM GV +GYLYKMRF Y+HFPINV++ G+ VEIRNFLGEKRVR+V+L PGV YVR+ DVKDQIELSGNDI VS+TAA+IQQSTSV+ KD+RKFLDGIYVSEK I +E+
Sbjct: 64 ELACVRTVCSHIENMFVGVNQGYLYKMRFVYSHFPINVTLAGENVEIRNFLGEKRVRKVKLGPGVTYVRSDDVKDQIELSGNDIALVSLTAAQIQQSTSVRHKDLRKFLDGIYVSEKGPIPKED 187 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7233.15420.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7233.15420.1 >prot_E_fasciculatus_S2_contig7233.15420.1 ID=prot_E_fasciculatus_S2_contig7233.15420.1|Name=mRNA_E_fasciculatus_S2_contig7233.15420.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=113bp MITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGback to top mRNA from alignment at E_fasciculatus_S2_contig7233:119..2500+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7233.15420.1 ID=mRNA_E_fasciculatus_S2_contig7233.15420.1|Name=mRNA_E_fasciculatus_S2_contig7233.15420.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2382bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7233:119..2500+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7233:119..2500+ >mRNA_E_fasciculatus_S2_contig7233.15420.1 ID=mRNA_E_fasciculatus_S2_contig7233.15420.1|Name=mRNA_E_fasciculatus_S2_contig7233.15420.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=339bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7233:119..2500+ (Ectocarpus fasciculatus EfasUO2)back to top |