prot_E_fasciculatus_S2_contig7232.15419.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7232.15419.1
Unique Nameprot_E_fasciculatus_S2_contig7232.15419.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length1152
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7232.15419.1 vs. uniprot
Match: D8LI48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI48_ECTSI)

HSP 1 Score: 681 bits (1756), Expect = 1.210e-225
Identity = 812/949 (85.56%), Postives = 826/949 (87.04%), Query Frame = 0 
Query:  208 QQKDYLHLIKAAGFRGNWREVAALVSEMGGNGVKGNVYIYNTAIAAMARCGRPREAEALLTVMLERDSIAPDTISXXXXXXXXXXXXXXXXXXXXLGRMTELASSGGLLHXXXXXXXXXXXXXXXXXXXVAAADVLKTMAKAGVTPNIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEMKLGVAGAASGGAPAPAGXXXXXXXXXXXPDVVSYASAITACARARRVDEALGLLSELRVNEAQAAAAAAGDVARGAELLDEMIAAGLRPNTIHCDTMVAAWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGINRRRYTDWAPELANIARLLQNGPGSHGXXXXXXXXXXXXXXXXXXXKAGADRXXXXXXXXXXXXXXXXXXPSPEELDCSIEALGDADDAGGATSLLRVMRREGFHASPRAYRSVVYACARVGLLNEAMTLAKEMQSSXXXXXXXXXXXXXXXXXXXX--QQPASPCNDDCDVESRSTAEEASAGGPPALGDGTSLGAVASFAEWGLEEETEREAGNGGVASELVPRGAPSAGTASGEDWAEDGSWGAGNDKSNGGNRGAVDEDEDGAEFDLAMVYNCIICNFARAATGDSGGVGGVCDHRIGRAPAGASVLAAAEKAAA---SAVAEETGVGGGARGGKSGPGEDGGHAEAGGGDVAGEGLVALLFGVAERAEGSLTDEAANGGVEIDRDEEVA 1151
            +QKDYLHLIKAAGFRGNWREVAALVSEMGG GV+GNVYIYNTAIAAMARCGRPREAEALLTVMLERDSIAPDTISXXXXXXXXXXXXXX      LGRMTELAS G LLHXXXXXXXXXXXXXXXXXXX       K MA+AGVTPNIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         QEMKLGVAGAASGGAP   G           PDVVSYASAITACARARRVDEALGLLSELRVNEAQAAAAAAGDVA GAELLDEMIAAGLRPN IHCDTMVAAW             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGINRRRYTDWAPELANIARLLQNGPGSHG XXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXX    SPEELDCSIEALGDADDAGGAT+LLRVMRREGFHASPRAYRSVVYACARVGLL+EAMTLAKEMQSS                      Q+P S  NDDC+VE+RS AEE  A  PPALGDG SLGA ASFAE GLEEETEREA NGGVASELVPR  PS G ASGED  E+GS  A ND+ N GN GAV+EDEDGAEFDLAMVYNCIICNFARAATGD GG GGVCDHR+GRAPAGASVLA AEKAAA   SAVAEETGVGGG RGG+SGPG+DGG AEA GGDV GEGLVALLFGVAERAEGSLTDEAANGGVEID DEEVA
Sbjct:   21 KQKDYLHLIKAAGFRGNWREVAALVSEMGGKGVEGNVYIYNTAIAAMARCGRPREAEALLTVMLERDSIAPDTISXXXXXXXXXXXXXXDAARRLLGRMTELASGGALLHXXXXXXXXXXXXXXXXXXXXXXXXXXKMMAEAGVTPNIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDWTAAVQLLQEMKLGVAGAASGGAPG--GGGTAGVEVAPPPDVVSYASAITACARARRVDEALGLLSELRVNEAQAAAAAAGDVACGAELLDEMIAAGLRPNKIHCDTMVAAWSAEGKPERAVALMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGINRRRYTDWAPELANIARLLQNGPGSHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----SPEELDCSIEALGDADDAGGATNLLRVMRREGFHASPRAYRSVVYACARVGLLDEAMTLAKEMQSSSSSAFAAQRQQADVEPPKRLREQEPPSSFNDDCEVENRSIAEETRADEPPALGDGASLGAAASFAERGLEEETEREARNGGVASELVPRRVPSTGAASGEDCVEEGSLVASNDRGN-GNLGAVNEDEDGAEFDLAMVYNCIICNFARAATGDGGGAGGVCDHRVGRAPAGASVLAVAEKAAAVAASAVAEETGVGGGERGGRSGPGKDGGRAEARGGDVPGEGLVALLFGVAERAEGSLTDEAANGGVEIDHDEEVA 962
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7232.15419.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LI48_ECTSI1.210e-22585.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 413..524
e-value: 6.5E-11
score: 42.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 833..911
e-value: 2.0E-7
score: 32.5
coord: 188..310
e-value: 7.5E-24
score: 86.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 311..383
e-value: 8.0E-10
score: 40.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 401..565
e-value: 1.4E-43
score: 151.5
coord: 617..812
e-value: 2.1E-31
score: 111.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 243..291
e-value: 3.6E-7
score: 30.3
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 711..757
e-value: 7.4E-5
score: 22.7
coord: 317..365
e-value: 2.7E-8
score: 33.8
coord: 634..689
e-value: 0.01
score: 15.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 588..614
e-value: 0.017
score: 15.3
coord: 872..899
e-value: 0.11
score: 12.8
coord: 532..557
e-value: 0.04
score: 14.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 461..495
e-value: 2.2E-7
score: 28.6
coord: 321..355
e-value: 0.0012
score: 16.8
coord: 245..279
e-value: 4.8E-4
score: 18.1
coord: 719..751
e-value: 3.1E-5
score: 21.9
coord: 281..308
e-value: 6.1E-4
score: 17.8
coord: 426..459
e-value: 1.4E-4
score: 19.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 243..277
score: 9.58
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 424..458
score: 11.06
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 279..309
score: 9.832
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 319..353
score: 10.249
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 208..242
score: 5.963
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 646..680
score: 9.778
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 459..493
score: 12.09
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 586..620
score: 9.197
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 494..528
score: 9.701
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 834..868
score: 5.875
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 716..750
score: 11.367
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 529..559
score: 7.541
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 681..715
score: 8.144
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 354..388
score: 9.788
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 389..423
score: 7.794
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 869..903
score: 8.561
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 317..459
coord: 215..307
coord: 620..761
coord: 449..617

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7232contigE_fasciculatus_S2_contig7232:210..5801 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7232.15419.1mRNA_E_fasciculatus_S2_contig7232.15419.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7232 210..7433 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7232.15419.1 ID=prot_E_fasciculatus_S2_contig7232.15419.1|Name=mRNA_E_fasciculatus_S2_contig7232.15419.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=1152bp
MVLHAITPVNAPVTTPCPLRSCHRTVPMRRNPSANFHDASGGSTTSLSAA
SGISKVNCQHVAVSRGAAAVVERGRRGRRRGRGEISLLGAASDGWPPELG
GRRVPSVAASYSVAASAGEGTTTAAADSNGKNSGGSGGSSSRKSANSSGS
SGSGGGGGSSSSSSNRPPTGRIGSSSTPVRATTTTGMTDPRRRRRLGNVA
AARQTEQQQKDYLHLIKAAGFRGNWREVAALVSEMGGNGVKGNVYIYNTA
IAAMARCGRPREAEALLTVMLERDSIAPDTISYNSAINGHARCGDLDSAR
RLLGRMTELASSGGLLHPDQFTYNAVANAAAKRGDAVAAADVLKTMAKAG
VTPNIITYNSCLAACKAKGDLPRTVVLLEMMREDGIDPDQRSYSAAIATA
GIRGLWEEVQGFLATMREEDLTPDKVTFNTAIKAVADNGQCDVAFSLLAE
MKNEGLTPDQISYNGVLGACGNAGEWKAALQLLEDMRQAGVTPNAYNYSA
AMDACGKAGRQREALALLGHMRKARVRADTACYNAAIDACSVAMDWTAAL
QLLQEMKLGVAGAASGGAPAPAGGGTAGAETPPPPDVVSYASAITACARA
RRVDEALGLLSELRVNEAQAAAAAAGDVARGAELLDEMIAAGLRPNTIHC
DTMVAAWSAEGKPERAVALMRRLQSHGFEPSPNTYETIVWGFAKEANWAA
AVRFLAYVLGLGLQPSVRSWDAAIAACSQAGHWERALALLANMRKQGIRP
SKVTYTAAVVGINRRRYTDWAPELANIARLLQNGPGSHGGGGGAAAAATD
ATTQEGGGKAGADRGGDKGEGGGGRRGSGGGGPSPEELDCSIEALGDADD
AGGATSLLRVMRREGFHASPRAYRSVVYACARVGLLNEAMTLAKEMQSSS
SSAFAAQRQRVVVERPRRRQQPASPCNDDCDVESRSTAEEASAGGPPALG
DGTSLGAVASFAEWGLEEETEREAGNGGVASELVPRGAPSAGTASGEDWA
EDGSWGAGNDKSNGGNRGAVDEDEDGAEFDLAMVYNCIICNFARAATGDS
GGVGGVCDHRIGRAPAGASVLAAAEKAAASAVAEETGVGGGARGGKSGPG
EDGGHAEAGGGDVAGEGLVALLFGVAERAEGSLTDEAANGGVEIDRDEEV
A*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
IPR033443PPR_long