|
|
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7232.15419.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI48_ECTSI) HSP 1 Score: 681 bits (1758), Expect = 8.730e-220 Identity = 812/949 (85.56%), Postives = 826/949 (87.04%), Query Frame = 1
Query: 622 QQKDYLHLIKAAGFRGNWREVAALVSEMGGNGVKGNVYIYNTAIAAMARCGRPREAEALLTVMLERDSIAPDTISXXXXXXXXXXXXXXXXXXXXLGRMTELASSGGLLHXXXXXXXXXXXXXXXXXXXVAAADVLKTMAKAGVTPNIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEMKLGVAGAASGGAPAPAGXXXXXXXXXXXPDVVSYASAITACARARRVDEALGLLSELRVNEAQAAAAAAGDVARGAELLDEMIAAGLRPNTIHCDTMVAAWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGINRRRYTDWAPELANIARLLQNGPGSHGXXXXXXXXXXXXXXXXXXXKAGADRXXXXXXXXXXXXXXXXXXPSPEELDCSIEALGDADDAGGATSLLRVMRREGFHASPRAYRSVVYACARVGLLNEAMTLAKEMQSSXXXXXXXXXXXXXXXXXXXX--QQPASPCNDDCDVESRSTAEEASAGGPPALGDGTSLGAVASFAEWGLEEETEREAGNGGVASELVPRGAPSAGTASGEDWAEDGSWGAGNDKSNGGNRGAVDEDEDGAEFDLAMVYNCIICNFARAATGDSGGVGGVCDHRIGRAPAGASVLAAAEKAAA---SAVAEETGVGGGARGGKSGPGEDGGHAEAGGGDVAGEGLVALLFGVAERAEGSLTDEAANGGVEIDRDEEVA 3453
+QKDYLHLIKAAGFRGNWREVAALVSEMGG GV+GNVYIYNTAIAAMARCGRPREAEALLTVMLERDSIAPDTISXXXXXXXXXXXXXX LGRMTELAS G LLHXXXXXXXXXXXXXXXXXXX K MA+AGVTPNIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QEMKLGVAGAASGGAP G PDVVSYASAITACARARRVDEALGLLSELRVNEAQAAAAAAGDVA GAELLDEMIAAGLRPN IHCDTMVAAW XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGINRRRYTDWAPELANIARLLQNGPGSHG XXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXX SPEELDCSIEALGDADDAGGAT+LLRVMRREGFHASPRAYRSVVYACARVGLL+EAMTLAKEMQSS Q+P S NDDC+VE+RS AEE A PPALGDG SLGA ASFAE GLEEETEREA NGGVASELVPR PS G ASGED E+GS A ND+ N GN GAV+EDEDGAEFDLAMVYNCIICNFARAATGD GG GGVCDHR+GRAPAGASVLA AEKAAA SAVAEETGVGGG RGG+SGPG+DGG AEA GGDV GEGLVALLFGVAERAEGSLTDEAANGGVEID DEEVA
Sbjct: 21 KQKDYLHLIKAAGFRGNWREVAALVSEMGGKGVEGNVYIYNTAIAAMARCGRPREAEALLTVMLERDSIAPDTISXXXXXXXXXXXXXXDAARRLLGRMTELASGGALLHXXXXXXXXXXXXXXXXXXXXXXXXXXKMMAEAGVTPNIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDWTAAVQLLQEMKLGVAGAASGGAPG--GGGTAGVEVAPPPDVVSYASAITACARARRVDEALGLLSELRVNEAQAAAAAAGDVACGAELLDEMIAAGLRPNKIHCDTMVAAWSAEGKPERAVALMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGINRRRYTDWAPELANIARLLQNGPGSHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----SPEELDCSIEALGDADDAGGATNLLRVMRREGFHASPRAYRSVVYACARVGLLDEAMTLAKEMQSSSSSAFAAQRQQADVEPPKRLREQEPPSSFNDDCEVENRSIAEETRADEPPALGDGASLGAAASFAERGLEEETEREARNGGVASELVPRRVPSTGAASGEDCVEEGSLVASNDRGN-GNLGAVNEDEDGAEFDLAMVYNCIICNFARAATGDGGGAGGVCDHRVGRAPAGASVLAVAEKAAAVAASAVAEETGVGGGERGGRSGPGKDGGRAEARGGDVPGEGLVALLFGVAERAEGSLTDEAANGGVEIDHDEEVA 962
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 690.6 |
| Seed ortholog evalue | 1.2e-195 |
| Seed eggNOG ortholog | 2880.D8LI48 |
| Model size | 5088 |
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| EggNOG free text desc. | endonuclease activity |
| EggNOG OGs | KOG4197@1,KOG4197@2759 |
| Ec32 ortholog description | Pentatricopeptide repeat |
| Ec32 ortholog | Ec-26_005210.1 |
| Cds size | 3456 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842387.0559103-CDS-E_fasciculatus_S2_contig7232:209..1414 | 1696842387.0559103-CDS-E_fasciculatus_S2_contig7232:209..1414 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7232 210..1414 + |
| 1696842387.0665662-CDS-E_fasciculatus_S2_contig7232:1591..1766 | 1696842387.0665662-CDS-E_fasciculatus_S2_contig7232:1591..1766 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7232 1592..1766 + |
| 1696842387.0757036-CDS-E_fasciculatus_S2_contig7232:1996..2120 | 1696842387.0757036-CDS-E_fasciculatus_S2_contig7232:1996..2120 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7232 1997..2120 + |
| 1696842387.084779-CDS-E_fasciculatus_S2_contig7232:2580..2948 | 1696842387.084779-CDS-E_fasciculatus_S2_contig7232:2580..2948 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7232 2581..2948 + |
| 1696842387.10403-CDS-E_fasciculatus_S2_contig7232:3044..3139 | 1696842387.10403-CDS-E_fasciculatus_S2_contig7232:3044..3139 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7232 3045..3139 + |
| 1696842387.1164587-CDS-E_fasciculatus_S2_contig7232:3602..3717 | 1696842387.1164587-CDS-E_fasciculatus_S2_contig7232:3602..3717 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7232 3603..3717 + |
| 1696842387.1327956-CDS-E_fasciculatus_S2_contig7232:4226..4322 | 1696842387.1327956-CDS-E_fasciculatus_S2_contig7232:4226..4322 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7232 4227..4322 + |
| 1696842387.1435719-CDS-E_fasciculatus_S2_contig7232:4523..5801 | 1696842387.1435719-CDS-E_fasciculatus_S2_contig7232:4523..5801 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7232 4524..5801 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842387.1535053-UTR-E_fasciculatus_S2_contig7232:5801..7433 | 1696842387.1535053-UTR-E_fasciculatus_S2_contig7232:5801..7433 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig7232 5802..7433 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7232.15419.1 >prot_E_fasciculatus_S2_contig7232.15419.1 ID=prot_E_fasciculatus_S2_contig7232.15419.1|Name=mRNA_E_fasciculatus_S2_contig7232.15419.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=1152bp
MVLHAITPVNAPVTTPCPLRSCHRTVPMRRNPSANFHDASGGSTTSLSAA
SGISKVNCQHVAVSRGAAAVVERGRRGRRRGRGEISLLGAASDGWPPELG
GRRVPSVAASYSVAASAGEGTTTAAADSNGKNSGGSGGSSSRKSANSSGS
SGSGGGGGSSSSSSNRPPTGRIGSSSTPVRATTTTGMTDPRRRRRLGNVA
AARQTEQQQKDYLHLIKAAGFRGNWREVAALVSEMGGNGVKGNVYIYNTA
IAAMARCGRPREAEALLTVMLERDSIAPDTISYNSAINGHARCGDLDSAR
RLLGRMTELASSGGLLHPDQFTYNAVANAAAKRGDAVAAADVLKTMAKAG
VTPNIITYNSCLAACKAKGDLPRTVVLLEMMREDGIDPDQRSYSAAIATA
GIRGLWEEVQGFLATMREEDLTPDKVTFNTAIKAVADNGQCDVAFSLLAE
MKNEGLTPDQISYNGVLGACGNAGEWKAALQLLEDMRQAGVTPNAYNYSA
AMDACGKAGRQREALALLGHMRKARVRADTACYNAAIDACSVAMDWTAAL
QLLQEMKLGVAGAASGGAPAPAGGGTAGAETPPPPDVVSYASAITACARA
RRVDEALGLLSELRVNEAQAAAAAAGDVARGAELLDEMIAAGLRPNTIHC
DTMVAAWSAEGKPERAVALMRRLQSHGFEPSPNTYETIVWGFAKEANWAA
AVRFLAYVLGLGLQPSVRSWDAAIAACSQAGHWERALALLANMRKQGIRP
SKVTYTAAVVGINRRRYTDWAPELANIARLLQNGPGSHGGGGGAAAAATD
ATTQEGGGKAGADRGGDKGEGGGGRRGSGGGGPSPEELDCSIEALGDADD
AGGATSLLRVMRREGFHASPRAYRSVVYACARVGLLNEAMTLAKEMQSSS
SSAFAAQRQRVVVERPRRRQQPASPCNDDCDVESRSTAEEASAGGPPALG
DGTSLGAVASFAEWGLEEETEREAGNGGVASELVPRGAPSAGTASGEDWA
EDGSWGAGNDKSNGGNRGAVDEDEDGAEFDLAMVYNCIICNFARAATGDS
GGVGGVCDHRIGRAPAGASVLAAAEKAAASAVAEETGVGGGARGGKSGPG
EDGGHAEAGGGDVAGEGLVALLFGVAERAEGSLTDEAANGGVEIDRDEEV
A* back to topmRNA from alignment at E_fasciculatus_S2_contig7232:210..7433+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig7232.15419.1 ID=mRNA_E_fasciculatus_S2_contig7232.15419.1|Name=mRNA_E_fasciculatus_S2_contig7232.15419.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=7224bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7232:210..7433+ (Ectocarpus fasciculatus EfasUO2)
ATGGTTCTTCATGCAATCACCCCGGTCAATGCCCCTGTGACCACTCCATG
TCCCTTACGATCATGCCATCGTACCGTCCCAATGCGACGAAACCCATCCG
CCAACTTTCACGATGCTAGCGGTGGTAGTACCACCAGCCTCTCGGCTGCG
TCGGGCATCTCCAAGGTGAACTGCCAACACGTAGCAGTCAGCAGGGGCGC
TGCCGCCGTTGTGGAGAGAGGGAGAAGAGGAAGGAGAAGAGGCAGAGGGG
AGATCTCTCTGCTGGGAGCAGCTTCGGACGGCTGGCCGCCTGAGCTAGGC
GGTCGACGAGTCCCCTCGGTTGCGGCATCATACTCGGTGGCAGCATCAGC
GGGAGAAGGCACAACAACGGCAGCAGCAGACAGCAACGGCAAGAATAGTG
GCGGCAGTGGCGGTAGCAGCAGTAGAAAAAGTGCTAACAGTAGCGGCAGC
AGCGGCAGCGGCGGCGGCGGCGGCAGCAGCAGTAGTAGCAGCAACCGACC
CCCCACCGGAAGGATTGGCAGCTCCTCGACTCCCGTACGGGCGACGACGA
CGACTGGGATGACTGACCCTCGCCGGCGGCGCCGCCTCGGCAATGTTGCC
GCCGCCAGACAGACGGAGCAGCAGCAGAAGGATTACCTGCACCTCATCAA
GGCAGCCGGCTTCCGAGGGAACTGGCGAGAAGTGGCGGCTTTGGTCAGCG
AGATGGGAGGGAACGGGGTCAAGGGCAACGTCTACATCTACAACACCGCC
ATCGCGGCGATGGCGCGTTGCGGCCGCCCGCGGGAAGCCGAGGCGTTGCT
CACGGTCATGCTCGAGCGCGACTCCATCGCGCCAGACACGATCTCCTACA
ACTCGGCCATAAACGGGCACGCACGTTGCGGGGACCTGGACTCAGCCCGG
CGCCTCCTGGGCCGCATGACGGAACTAGCCTCCAGCGGCGGTCTTCTGCA
CCCCGACCAGTTCACCTACAACGCCGTCGCCAACGCGGCCGCGAAGAGAG
GGGACGCGGTTGCCGCCGCCGATGTCCTCAAGACGATGGCGAAGGCAGGC
GTTACTCCGAACATCATCACCTACAACTCTTGCCTGGCGGCGTGCAAGGC
CAAGGGCGACCTGCCAAGGACGGTGGTGCTGCTGGAGATGATGAGGGAGG
ACGGGATAGATCCAGACCAGAGGAGCTATTCGGCCGCCATTGCCACCGCC
GGCATGTGAGCTCCCGCCCGTATCGACGCGTTTCCTTTTTTCGTCGTGCG
ACGTGCGACGGCACTCGCCCCGAAGGGAGATATCTTTATTCCACTCCATA
GATGTTTCTCACCCAACCGCAGCGGCAGCCCGTTTGACTACTCACTGCTG
CGGCGTGCAAACTCCCTCCTCCCCCCTCCCAGTCGCGGCCTTTGGGAAGA
GGTGCAGGGTTTCCTGGCGACCATGAGAGAAGAGGATTTGACGCCTGATA
AGGTGACCTTCAATACGGCTATCAAGGCGGTGGCTGACAACGGGCAGTGC
GACGTGGCGTTTTCGTTGTTGGCCGAGATGAAGAACGAGGGCCTGACGCC
TGACCAGGTGACCCTGCTTGTCTTTTTTGGTCGAAACCGGAAAGTGTTTC
ACAGCACGTTTGTTCAGCGTTGGAGCGTTGGTATGATTGGTCATGACGCA
TACTACTCAGAAACTCGAGCACAAGATCGCCGAAGGAATGTAATATCCGT
TTGCGAACGTAGTCTGTGGTTGGTTGGTTGCTTTCGTATTTGGCGCGCTC
CACATTCTTCACTGGCTTGTGGTTTTACGCTTTACAGATCAGCTACAACG
GCGTGCTGGGTGCGTGTGGAAACGCCGGCGAGTGGAAGGCGGCCCTCCAG
CTCTTGGAAGACATGCGGCAAGCAGGAGTCACCCCAAACGCGTATAACTA
CTCTGCCGCAAGTGAGAAAGTGGAAGAGATAACGGGCAGATCGGTAGGCA
GGCACAGGGGCAGACAGCCAGACAAATGCGGGAGGTCAATAGAAGCCACT
CTCGACATCACCAGAGAACTAGCGAGAGAAAACCAGAGAGAAAAATAGAA
TCAGGCAAAACAAGCTAGCGTATTTGTGTTTCTTGCCACCATGCGGTGGC
AATCCGGAATTTTGGTTATGCTTTCTCGAGGTTTTCATTTTCTCAGTTTC
TACCCCCAGGGCGGTGCGACGTTCGGCCAAGTTTCGGTTAGCCTGATGTT
ACTTCGCTGGATATTGCGAAAAGCCTGACAAGGTTTTCACGTTGGTTCGT
TTTTCCGTTGACCATTTTCCTGTGTTGAACGATGACTATCCCCCGCATCA
CTTTCCCTGTTTCCCTTGGTCGGATCGGTTCGGCGACACCGCGCCGACCC
GCCTCGGCCACGCTTTTGCAGTGGACGCTTGCGGGAAAGCCGGCCGGCAG
CGAGAGGCCCTCGCCCTTCTCGGGCACATGCGGAAGGCCCGGGTCCGGGC
GGACACCGCCTGCTACAACGCCGCCATCGACGCCTGCTCCGTGGCCATGG
ACTGGACCGCGGCCCTTCAGCTGCTGCAGGAAATGAAACTCGGGGTAGCC
GGCGCCGCGAGCGGCGGCGCCCCCGCCCCCGCGGGAGGGGGCACGGCAGG
CGCCGAGACACCCCCCCCACCCGATGTCGTGAGCTACGCGAGCGCCATAA
CGGCGTGCGCACGCGCACGGCGCGTGGACGAAGCCCTCGGCCTTCTGTCC
GAGCTGCGGGTGAACGAGGCGCAGGCGGCCGCGGCCGCGGTAAGAGGGGG
CTTGAGGAACGGGGGAGGGCGGCGGGCGGGGTTGCCGGTGCCCAACGTGG
TGGCGTATTCGGCGGGGCTGTTCGCGTGCCTGAAGGCCGGGGACGTGGCG
CGCGGGGCAGAGTTGCTGGACGAAATGATCGCGGCCGGCTTGCGCCCAAA
CACGATTCATTGCGACACCATGGTTGCGGCGTGAGTTTCGTTGTATTATT
ATTAATTTTTTTTTGCGCCTGTTGTTGCCTTCGTTCAACTTATGGCTGCA
CCTGGAGGATTAGGATTTGTATGCGTCTGTAGTCTACACTGCTTTCAATG
ACGATAAAGATTTACGCGTTCGATAACAACCTCCGTCCCCATGACCGAGC
CGTCGAGGTTTCCCATGTCTATTGGATGTTTGGCATATCAAAATGGAATG
GTTGGAAGTTGTTGTCTCTATCTTGTTCGCAGGATTTTCTCCGCCTGGTC
GGCAGCTCAAACGCTTCATTCCCGTTCAGAGCACGTCGTTAGGGCAAGGC
TGAATCCCGTGCGGTTGGTCTGGGTCACTCGTGCCATGCCCCCCCCCCCC
CGGCGCCGAATTAACACACTTTGATGGTGGTTTACATGCACAGCACCCAC
CATTCGGTAACGACAACGATAACAACCGCGACCCGGCCCGCAGGTGGTCC
GCGGAAGGAAAACCGGAGCGCGCCGTGGCCCTAATGAGGCGCCTCCAGTC
CCATGGGTTTGAGCCTTCGCCCAACACCTACGAGACCATAGTCTGGGGCT
TCGCAAAGGTAGGGAGAGGCGGCAGTCTGGGCATGGCTGGGGAGGCAGGG
GATGAGAGCCTACGTGTCCGAGATATTCTCTACTCAAATAATGCAGATCA
GAAAATGAAACGACGGAGGCGATGGACACCATTCGGTTCTATTGCGAGTT
GGTCACCAGTTTGCGACTCGTTGAACTTGCGGGCGTTTCGCCGCTTACGC
GGTAATTTCGGCGTGTTCGATAGAGGTATGCCCGTCGCGCTTGCAGATCG
GCTGTTCGATAGAGATATGCCCGTCGTGCTTGCAGTATCGGCGACGCACG
TATTCCTCCCCGCGGCTTGTCCCAAGACTGTTCTCGGCCGACGTTCATTC
AACGAGAAGCTCCCAAGGCTGAGCAAAGACAGAAGGTCCAGTTTTCTTTT
TCACCCTGCCCCCCTTTGTGGGATCTCGATGCGGGGTAGCTTGCTCTACT
GCTCCCAACGCCTTTTTCCCTTCTCCGTATGACAAAAAAACGATGCCCCG
TGCTCAATCAACCCCAGGAGGCCAATTGGGCAGCTGCGGTTCGCTTCCTG
GCGTACGTGCTTGGCCTGGGGCTGCAGCCAAGCGTTCGCTCGTGGGATGC
CGCCATCGCAGCTGTGAGTGTCCTGCGGAGACTGGATTTTGCGGCGCTCA
AGAAGCGCGACCAAGGTCGCCAAATCTAACCTGCTCGACCTGGGGGTAGA
CACGTATTCTAATGGTTTTAGCCGGGTCTAACCTTGTTCCCGACACTTGA
ATTAAGCGCACGTCTCTAACTACTAGCACCCACCCTGCTTCCGCCCCGTT
TCGACCCCACCCAGTGCTCGCAGGCCGGCCACTGGGAGCGGGCGCTCGCC
CTCCTGGCGAACATGAGGAAGCAGGGCATTCGCCCGAGCAAGGTTACCTA
CACCGCTGCCGTTGTGGGGATCAACCGCCGACGGTACACGGACTGGGCCC
CGGAGCTTGCAAACATCGCGCGACTCCTTCAGAACGGGCCGGGGTCCCAC
GGCGGCGGCGGCGGCGCCGCCGCCGCCGCCACCGATGCCACAACACAAGA
AGGAGGAGGAAAGGCGGGAGCCGACCGGGGTGGGGACAAGGGCGAAGGAG
GGGGTGGGCGGCGCGGGAGTGGCGGCGGCGGGCCGTCTCCGGAAGAGCTG
GACTGCTCGATAGAGGCCCTCGGGGACGCCGACGACGCCGGCGGCGCGAC
GAGCCTGCTGAGGGTGATGCGCCGGGAGGGTTTCCACGCGTCGCCGAGGG
CCTACCGGTCTGTCGTCTACGCCTGCGCGAGGGTCGGGCTGCTCAACGAG
GCGATGACGCTGGCGAAGGAGATGCAGAGCTCCAGCAGCAGCGCGTTCGC
CGCGCAGCGGCAGCGAGTTGTTGTTGAGCGGCCGAGGCGACGACAACAAC
CTGCGTCGCCGTGCAACGATGACTGCGATGTCGAGAGCAGAAGCACCGCA
GAAGAAGCCTCTGCGGGAGGGCCTCCGGCTCTGGGAGACGGGACTTCTCT
CGGTGCGGTGGCGAGTTTCGCCGAATGGGGGCTGGAAGAAGAGACTGAGC
GTGAAGCAGGGAACGGTGGCGTAGCGTCGGAGTTGGTACCACGCGGAGCC
CCATCGGCAGGGACCGCCTCGGGCGAAGACTGGGCCGAAGACGGGTCTTG
GGGGGCTGGCAACGACAAAAGCAACGGCGGCAACCGTGGCGCTGTCGACG
AAGACGAGGACGGAGCGGAGTTCGACCTCGCGATGGTGTACAACTGCATC
ATCTGCAACTTCGCGCGCGCGGCGACCGGCGACAGCGGCGGTGTCGGGGG
TGTCTGTGACCACCGCATCGGGAGGGCGCCCGCCGGGGCGTCAGTGCTGG
CGGCAGCTGAAAAGGCAGCGGCATCAGCGGTTGCGGAGGAGACGGGAGTC
GGCGGCGGGGCGCGAGGAGGGAAGAGCGGCCCTGGCGAGGACGGTGGTCA
TGCGGAAGCCGGGGGTGGCGACGTTGCGGGAGAAGGGCTCGTTGCCCTCC
TGTTTGGTGTCGCGGAACGAGCCGAAGGATCCCTCACGGACGAGGCGGCC
AACGGCGGAGTTGAGATCGATCGAGACGAGGAGGTTGCATGACACGACAG
CAAGCAGTGTTGGCCTGTTTCACTCCATCTCAGTTTGTGTCGGCAATGGT
GGGAGGGTTGGTGGTGGTAGTAGAAGCAACGTGATAGGTTCGGGGATGGG
GTCTGCTTAAGAGGGTTTGAAGCTGAGAGATAGCTGATAGCTGAGAGATA
CTCTGCCCGAATATGTCCCGAGGTGTGTTGCGGCTCTGTATATCACCTTG
AATGTAGAGAACGGGGGAAAAATCATCCTTGCGCGTTTTTATTCCTTCCT
TGCTTGGGGGGGGGGGGTTCTGAGTCGTCGCGTCGCATGTGTATGCAGTC
TATGTCCGCGGCGCGGTGAAGTCGACCCGCTTCTCAATGTAAGGAAGTAT
TTTGTGTATCCGCGGCGCAAGTTTGTTTCACTCGAATTTTACATCCCGCA
CGGTTCGCATGATCGCTCTCGAAGGATGCTAAAACACCTGCTGTAAGTGG
CAGGGATGTGTAATTGAATCACAGTCAGTGCCGCCGCCCTCATTAGAAGT
ACAACACCGGCAGGAAAAAAGCCAGGCTCAGATGTAAGTGAGTACTTCAA
CAGTGCGACGAAGGCGTTGGGAATTGGGGGTTCAAACCCCGAAAGTGCAC
TGAATCCTGCATGGTGGCGCTACAACGATCAATTGTTGATACACGAGACT
TTAAGCTTTTAGCCTTTGCTCAGGTCGGTGTTCCTTAGCCGTGGTCCGGC
ACTGCATGCTGCATGTCAAAGACTCGTTCGAAACAACGTCGAAAACCTGC
TGGCTTGCGTCTTGTGCAGCCAACAGGAGCTTTAGCCCTAAAAGAGCTGC
TGCGGTGTAGCTCAAGTGATGATGTGTCCACGTGTTGGTCTTTTCCAAGT
ACCGCGACAAACTACTGTACCACCAGACCTGTCACAAAGAAGCGAAGGCC
CGGGTTCATGGGACGGATGTCGCGGAAACCTCACCTTTCGGCAAGAGCTA
TAACCTCGCGCCCGAACTGACAATTTATTTCCAAAATAATATGGGGCGCC
CCCAGAGAACTACTGCTGTGTTCTTGTGTTTTTGACCGCTTCGACAGAGC
GTTGTTCCAGTTGTACAGGAATATTTTCTTGACTACGCTGAGGTTCCAAG
ATCTAGATTTAGTTGTTGTCGTTCAAACGCGTATTGGCTACGTACAACAC
ATACGGGAGGGACGAAAAAGCCGCAGCACGGACGGCGGAGACGAAAAGGC
ACACAGCAATTCCTCGAGCAAGTTGTCTGTGTGGAAGTTCCGACAAACTA
ACTTTTGTTGAATCGCCTCGACACCACCGGTGTTCGCTTGTGTACTCGTG
AAGAGTACATTGGTCTGTTCTAGTCGAACCCCCCCCCCCGTTTCCCACAC
ACACGCTGACCATCATTGCTCAAGAGAAGGATGCCCAACATTTGCAAAGG
AATTGAGGTAAGCTTAACCCCATTCCCTGATCGCACCATGTTGTGTAAAA
CTGGCCAAGCACCCTCGAGGCAGTTACATGCGTATCACTGTCTCTCGAAG
TGAAAGCACCAGAAAATATATTAAGTCATTCGCAGCTGTCGTCTCCGTAC
GCAAGGAAGTAAGCACAAGATACCGAACACCCTTAGCAGGATGCAGCGCA
CCCTTCACGCGACTCGCCGAATAC back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig7232:210..7433+ >mRNA_E_fasciculatus_S2_contig7232.15419.1 ID=mRNA_E_fasciculatus_S2_contig7232.15419.1|Name=mRNA_E_fasciculatus_S2_contig7232.15419.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=3456bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7232:210..7433+ (Ectocarpus fasciculatus EfasUO2)
ATGGTTCTTCATGCAATCACCCCGGTCAATGCCCCTGTGACCACTCCATG
TCCCTTACGATCATGCCATCGTACCGTCCCAATGCGACGAAACCCATCCG
CCAACTTTCACGATGCTAGCGGTGGTAGTACCACCAGCCTCTCGGCTGCG
TCGGGCATCTCCAAGGTGAACTGCCAACACGTAGCAGTCAGCAGGGGCGC
TGCCGCCGTTGTGGAGAGAGGGAGAAGAGGAAGGAGAAGAGGCAGAGGGG
AGATCTCTCTGCTGGGAGCAGCTTCGGACGGCTGGCCGCCTGAGCTAGGC
GGTCGACGAGTCCCCTCGGTTGCGGCATCATACTCGGTGGCAGCATCAGC
GGGAGAAGGCACAACAACGGCAGCAGCAGACAGCAACGGCAAGAATAGTG
GCGGCAGTGGCGGTAGCAGCAGTAGAAAAAGTGCTAACAGTAGCGGCAGC
AGCGGCAGCGGCGGCGGCGGCGGCAGCAGCAGTAGTAGCAGCAACCGACC
CCCCACCGGAAGGATTGGCAGCTCCTCGACTCCCGTACGGGCGACGACGA
CGACTGGGATGACTGACCCTCGCCGGCGGCGCCGCCTCGGCAATGTTGCC
GCCGCCAGACAGACGGAGCAGCAGCAGAAGGATTACCTGCACCTCATCAA
GGCAGCCGGCTTCCGAGGGAACTGGCGAGAAGTGGCGGCTTTGGTCAGCG
AGATGGGAGGGAACGGGGTCAAGGGCAACGTCTACATCTACAACACCGCC
ATCGCGGCGATGGCGCGTTGCGGCCGCCCGCGGGAAGCCGAGGCGTTGCT
CACGGTCATGCTCGAGCGCGACTCCATCGCGCCAGACACGATCTCCTACA
ACTCGGCCATAAACGGGCACGCACGTTGCGGGGACCTGGACTCAGCCCGG
CGCCTCCTGGGCCGCATGACGGAACTAGCCTCCAGCGGCGGTCTTCTGCA
CCCCGACCAGTTCACCTACAACGCCGTCGCCAACGCGGCCGCGAAGAGAG
GGGACGCGGTTGCCGCCGCCGATGTCCTCAAGACGATGGCGAAGGCAGGC
GTTACTCCGAACATCATCACCTACAACTCTTGCCTGGCGGCGTGCAAGGC
CAAGGGCGACCTGCCAAGGACGGTGGTGCTGCTGGAGATGATGAGGGAGG
ACGGGATAGATCCAGACCAGAGGAGCTATTCGGCCGCCATTGCCACCGCC
GGCATTCGCGGCCTTTGGGAAGAGGTGCAGGGTTTCCTGGCGACCATGAG
AGAAGAGGATTTGACGCCTGATAAGGTGACCTTCAATACGGCTATCAAGG
CGGTGGCTGACAACGGGCAGTGCGACGTGGCGTTTTCGTTGTTGGCCGAG
ATGAAGAACGAGGGCCTGACGCCTGACCAGATCAGCTACAACGGCGTGCT
GGGTGCGTGTGGAAACGCCGGCGAGTGGAAGGCGGCCCTCCAGCTCTTGG
AAGACATGCGGCAAGCAGGAGTCACCCCAAACGCGTATAACTACTCTGCC
GCAATGGACGCTTGCGGGAAAGCCGGCCGGCAGCGAGAGGCCCTCGCCCT
TCTCGGGCACATGCGGAAGGCCCGGGTCCGGGCGGACACCGCCTGCTACA
ACGCCGCCATCGACGCCTGCTCCGTGGCCATGGACTGGACCGCGGCCCTT
CAGCTGCTGCAGGAAATGAAACTCGGGGTAGCCGGCGCCGCGAGCGGCGG
CGCCCCCGCCCCCGCGGGAGGGGGCACGGCAGGCGCCGAGACACCCCCCC
CACCCGATGTCGTGAGCTACGCGAGCGCCATAACGGCGTGCGCACGCGCA
CGGCGCGTGGACGAAGCCCTCGGCCTTCTGTCCGAGCTGCGGGTGAACGA
GGCGCAGGCGGCCGCGGCCGCGGCCGGGGACGTGGCGCGCGGGGCAGAGT
TGCTGGACGAAATGATCGCGGCCGGCTTGCGCCCAAACACGATTCATTGC
GACACCATGGTTGCGGCGTGGTCCGCGGAAGGAAAACCGGAGCGCGCCGT
GGCCCTAATGAGGCGCCTCCAGTCCCATGGGTTTGAGCCTTCGCCCAACA
CCTACGAGACCATAGTCTGGGGCTTCGCAAAGGAGGCCAATTGGGCAGCT
GCGGTTCGCTTCCTGGCGTACGTGCTTGGCCTGGGGCTGCAGCCAAGCGT
TCGCTCGTGGGATGCCGCCATCGCAGCTTGCTCGCAGGCCGGCCACTGGG
AGCGGGCGCTCGCCCTCCTGGCGAACATGAGGAAGCAGGGCATTCGCCCG
AGCAAGGTTACCTACACCGCTGCCGTTGTGGGGATCAACCGCCGACGGTA
CACGGACTGGGCCCCGGAGCTTGCAAACATCGCGCGACTCCTTCAGAACG
GGCCGGGGTCCCACGGCGGCGGCGGCGGCGCCGCCGCCGCCGCCACCGAT
GCCACAACACAAGAAGGAGGAGGAAAGGCGGGAGCCGACCGGGGTGGGGA
CAAGGGCGAAGGAGGGGGTGGGCGGCGCGGGAGTGGCGGCGGCGGGCCGT
CTCCGGAAGAGCTGGACTGCTCGATAGAGGCCCTCGGGGACGCCGACGAC
GCCGGCGGCGCGACGAGCCTGCTGAGGGTGATGCGCCGGGAGGGTTTCCA
CGCGTCGCCGAGGGCCTACCGGTCTGTCGTCTACGCCTGCGCGAGGGTCG
GGCTGCTCAACGAGGCGATGACGCTGGCGAAGGAGATGCAGAGCTCCAGC
AGCAGCGCGTTCGCCGCGCAGCGGCAGCGAGTTGTTGTTGAGCGGCCGAG
GCGACGACAACAACCTGCGTCGCCGTGCAACGATGACTGCGATGTCGAGA
GCAGAAGCACCGCAGAAGAAGCCTCTGCGGGAGGGCCTCCGGCTCTGGGA
GACGGGACTTCTCTCGGTGCGGTGGCGAGTTTCGCCGAATGGGGGCTGGA
AGAAGAGACTGAGCGTGAAGCAGGGAACGGTGGCGTAGCGTCGGAGTTGG
TACCACGCGGAGCCCCATCGGCAGGGACCGCCTCGGGCGAAGACTGGGCC
GAAGACGGGTCTTGGGGGGCTGGCAACGACAAAAGCAACGGCGGCAACCG
TGGCGCTGTCGACGAAGACGAGGACGGAGCGGAGTTCGACCTCGCGATGG
TGTACAACTGCATCATCTGCAACTTCGCGCGCGCGGCGACCGGCGACAGC
GGCGGTGTCGGGGGTGTCTGTGACCACCGCATCGGGAGGGCGCCCGCCGG
GGCGTCAGTGCTGGCGGCAGCTGAAAAGGCAGCGGCATCAGCGGTTGCGG
AGGAGACGGGAGTCGGCGGCGGGGCGCGAGGAGGGAAGAGCGGCCCTGGC
GAGGACGGTGGTCATGCGGAAGCCGGGGGTGGCGACGTTGCGGGAGAAGG
GCTCGTTGCCCTCCTGTTTGGTGTCGCGGAACGAGCCGAAGGATCCCTCA
CGGACGAGGCGGCCAACGGCGGAGTTGAGATCGATCGAGACGAGGAGGTT
GCATGA back to top
|