mRNA_E_fasciculatus_S2_contig7220.15400.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7220.15400.1 vs.
Match: Heat (shock protein 70-putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN9_ECTSI) HSP 1 Score: 569 bits (1466), Expect = 4.340e-197 Identity = 311/455 (68.35%), Postives = 320/455 (70.33%), Query Frame = 1
Query: 1 KDFVVAIDLGTSCTAFSWKSIVDPAGPSVGVPDMKPNEDIIGKSPTTLLIAGSTGGDKMFRPTGAEAYGREAQLRYANGNIPHGAQLFKRFKMIYDDLLDAVTRSTSRKAEMMLMDIFVIALEYIKSVALRGMTLTHAVTAEHVTWVLTVPVCCSEPAKHFMREAAIKAGFIKGGDDDEGLVLCMEPIAACLALGNRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLQQLGEANGGPWGSTYVDTQFEAYLKASWLG*CCVPKPSKYT*QTLNKPDLCFTCSISF*VLGTGPLLFVRLQSTTAFPGRSKKPCFVAGGTQSTKKKREPSSCSHPSVRLIECQARNNIYVAALNPAVASQRALPTNSPPPRVSPEY*DYVLSVAQEAGGRSLESFFASSASYRIAQAWERAKIGLRSVDHDCRIDLSELSREPLEVTVEEMDEGRRAKNRGGT 1365
KDFVVAIDLGTSCTAFSWKSIVDPAGPS+GVPDMKPNEDIIGKSPTTLLIAGSTG DKMFRPTGAEAYGREAQ RYANG+IPHGAQLFKRFKMIYDDL+DAVT+STSRKAEMMLMDIFVIALEYIKSVAL GMTLTHAV+AE VTWVLTVPVCCSEPAKHFMREAA KAGFIKGG+DDEGLVLCMEPIAACLALGNRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSL+QLGEA+GGPWGST VD FEAYLK D+VLSVAQEAG RSLESFFASSASYRI QAWERAKIGLRSVDHDCRIDLSELSREPLEVT EEMDEGRR KNRGGT
Sbjct: 2 KDFVVAIDLGTSCTAFSWKSIVDPAGPSIGVPDMKPNEDIIGKSPTTLLIAGSTGSDKMFRPTGAEAYGREAQHRYANGDIPHGAQLFKRFKMIYDDLVDAVTKSTSRKAEMMLMDIFVIALEYIKSVALMGMTLTHAVSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALGNRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLK---------------------------------------------------------------------------------------------------------------------------DFVLSVAQEAGERSLESFFASSASYRINQAWERAKIGLRSVDHDCRIDLSELSREPLEVTTEEMDEGRRLKNRGGT 333
BLAST of mRNA_E_fasciculatus_S2_contig7220.15400.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT12_9PHAE) HSP 1 Score: 373 bits (958), Expect = 1.210e-120 Identity = 213/364 (58.52%), Postives = 228/364 (62.64%), Query Frame = 1
Query: 274 KMIYDDLLDAVTRSTSRKAEMMLMDIFVIALEYIKSVALRGMTLTHAVTAEHVTWVLTVPVCCSEPAKHFMREAAIKAGFIKGGDDDEGLVLCMEPIAACLALGNRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLQQLGEANGGPWGSTYVDTQFEAYLKASWLG*CCVPKPSKYT*QTLNKPDLCFTCSISF*VLGTGPLLFVRLQSTTAFPGRSKKPCFVAGGTQSTKKKREPSSCSHPSVRLIECQARNNIYVAALNPAVASQRALPTNSPPPRVSPEY*DYVLSVAQEAGGRSLESFFASSASYRIAQAWERAKIGLRSVDHDCRIDLSELSREPLEVTVEEMDEGRRAKNRGGT 1365
+ IYDDL+DAVT+STS++AEMMLMDIFVIALEYIKSVALR MTLTH V+A+ VTWVLTVPVCCSEPAKHFMREAA KAGFIKGG DDE LVLCMEPIAACLALG+RLQWRM D+YLVIDCGGGTVDISAFEVISSAPPSL+QLGEA+GGPWGST VD QFEAYLKAS D+VLSVAQEAG R+LESFFASSASYRI QAWERAKIGLRS+DHDCRIDLSELSREPLEVT +EMDEGRR KN GGT
Sbjct: 73 QQIYDDLVDAVTKSTSKRAEMMLMDIFVIALEYIKSVALRRMTLTHPVSADDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGSDDEDLVLCMEPIAACLALGDRLQWRMGDRYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRQFEAYLKASG------------------------------------------------------------------------------------------------------------------------DFVLSVAQEAGARALESFFASSASYRINQAWERAKIGLRSLDHDCRIDLSELSREPLEVTKDEMDEGRRLKNIGGT 316
BLAST of mRNA_E_fasciculatus_S2_contig7220.15400.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYS2_9PHAE) HSP 1 Score: 176 bits (445), Expect = 4.620e-50 Identity = 83/93 (89.25%), Postives = 89/93 (95.70%), Query Frame = 1
Query: 1 KDFVVAIDLGTSCTAFSWKSIVDPAGPSVGVPDMKPNEDIIGKSPTTLLIAGSTGGDKMFRPTGAEAYGREAQLRYANGNIPHGAQLFKRFKM 279
K+FVVAIDLGTSCTAFSWKS+ DPAGPS+GVPDMKPN+DIIGKSPTTLLIAGSTG D+MFRPTGAEAYGREAQ RYA G+IPHGAQLFKRFKM
Sbjct: 36 KEFVVAIDLGTSCTAFSWKSLADPAGPSIGVPDMKPNDDIIGKSPTTLLIAGSTGSDRMFRPTGAEAYGREAQRRYAIGDIPHGAQLFKRFKM 128
BLAST of mRNA_E_fasciculatus_S2_contig7220.15400.1 vs.
Match: Protein (kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDD7_9PHAE) HSP 1 Score: 151 bits (382), Expect = 7.850e-36 Identity = 94/259 (36.29%), Postives = 134/259 (51.74%), Query Frame = 1
Query: 10 VVAIDLGTSCTAFSWKSIVDPAGPSVGVPDMKPNEDIIGKSPTTLLIAGSTGGDKMFRPTGAEAYGREAQLRYANGNIPHGAQLFKRF-----KMIYDDLLDAVTRSTSRKAEMMLMDIFVIALEYIKSVALRGMT-LTHAVTAEHVTWVLTVPVCCSEPAKHFMREAAIKAGFIKGGDDDEGLVLCMEPIAACLALGNRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLQQLGEANGGPWGSTYVDTQFEAYLK 768
VVAID+G TA SWKS DP + +P E ++ KSP +LL+ + G A+ YA G+ P GA+LF+RF ++ + ++V + + ++EM L I L + + AL+ + V+A V WVLTVP S+ +R +A+ AG + D EGL C EPIAACLA +RL W+ YLV+DCGG TVDI V + L QL + GPWGS +D F+ +L+
Sbjct: 28 VVAIDIGKFGTACSWKSNWDPVPAVRNLDTQQPREKVVRKSPNSLLVHRDN--------VSVVSLGDTAEKSYACGSCPVGAKLFRRFGRQRMRVESEPTSESVVKCSRNRSEMELAKIMFYLLMHARDAALKNLPGAGKPVSAASVNWVLTVPASLSDRQWETVRNSAVMAGLVNDWHDREGLKFCPEPIAACLAFQDRLDWQAGKTYLVVDCGGVTVDIHVVGVCDTEKRELCQLLKGRSGPWGSETLDILFDEFLR 278
BLAST of mRNA_E_fasciculatus_S2_contig7220.15400.1 vs.
Match: Heat (shock protein 70-putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRC9_ECTSI) HSP 1 Score: 148 bits (373), Expect = 8.080e-36 Identity = 67/117 (57.26%), Postives = 81/117 (69.23%), Query Frame = 1
Query: 415 VTAEHVTWVLTVPVCCSEPAKHFMREAAIKAGFIKGGDDDEGLVLCMEPIAACLALGNRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLQQLGEANGGPWGSTYVDTQFEAYL 765
V V+WVLTVP CC+ PA FM +AAI+AG I G DD E L +C EP+AACLAL +RL W + D YLV+DCGGGTVDI AF++ PP L Q+G+ WGSTYVD QF +L
Sbjct: 35 VKPNRVSWVLTVPACCTAPATKFMSDAAIRAGLINGEDDAEHLTICKEPVAACLALEDRLDWSVNDMYLVVDCGGGTVDICAFKLAQLGPPILDQVGDNISESWGSTYVDEQFRVFL 151
BLAST of mRNA_E_fasciculatus_S2_contig7220.15400.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4X7_9PHAE) HSP 1 Score: 139 bits (351), Expect = 1.560e-34 Identity = 104/278 (37.41%), Postives = 147/278 (52.88%), Query Frame = 1
Query: 4 DFVVAIDLGTSCTAFSWKSIVDPAGPSVGVPDMKPNEDIIG---KSPTTLLIAGST---GGDKMFR-PTGAEAYGREAQLRYANGNIPHGAQLFKRFKMIY----------DDLLDAVTRSTSRKAEMMLMDIFVIALEYIKSVALRGMTL--THAVTAEHVTWVLTVPVCCSEPAKHFMREAAIKAGFIKGGDDDEGLVLCMEPIAACLALG----NRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLQQLGEANGGPWGSTYVDTQFEAYLK 768
D + AIDLGTS +A+++ ++V +GVP + NE + K+ T +L+ S+ GG M GAE +A R +G LFK FKM + DA S K + L+ + +ALEYIK V + + +H + A + WVLTVP S K FMR AA++AG I+ +D E L LC+EP AACL + N +W K +V+DCGGGTVDI+ V+ P L++L E GGPWGST DT+F+ ++K
Sbjct: 4 DVIAAIDLGTSRSAYAY-TVVGRDEIILGVPG-RLNESKVAVERKTATAVLLRRSSENRGGWCMVTFGDGAEQEYLDA--RNGDGEAAGNLALFKYFKMELFKGGRNGTKRSSIDDAEGISEDEKTRLPLVYVVSLALEYIKDVIINRLNNADSHTLRASDIRWVLTVPAIWSSFGKAFMRSAALRAGLIQDENDMEHLRLCLEPEAACLTVEHHHHNIRKWETGMKVMVLDCGGGTVDITTHHVVRMDPLGLEELEEPTGGPWGSTTADTKFKLFIK 277
BLAST of mRNA_E_fasciculatus_S2_contig7220.15400.1 vs.
Match: Heat (shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G266_ECTSI) HSP 1 Score: 134 bits (338), Expect = 1.710e-30 Identity = 97/276 (35.14%), Postives = 141/276 (51.09%), Query Frame = 1
Query: 4 DFVVAIDLGTSCTAFSWKSIVDPAGPSVGVPDMKPNEDIIG---KSPTTLLI--AGSTGGDKMFRPTGAEAYGREAQLRYANGNIPHGAQLFKRFKMIY----------DDLLDAVTRSTSRKAEMMLMDIFVIALEYIKSVALRGMTL--THAVTAEHVTWVLTVPVCCSEPAKHFMREAAIKAGFIKGGDDDEGLVLCMEPIAACLALG----NRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLQQLGEANGGPWGSTYVDTQFEAYLK 768
D + AIDLGTS +A+++ ++ +GVP + NE + K+ T +L+ A G G A + R G LFK FKM + DA S +K + L+ + +ALEYIK V + + +H + A + WVLTVP S FMR AA++AG I+ +D E L LC+EP AACL + N +W K +V+DCGGGT+DI+ V+S+ P L++L E GGPWGST D +F+ ++K
Sbjct: 4 DVIAAIDLGTSRSAYAY-TVTGRDDIILGVPG-RLNESKVSVERKTATAILLKRAPKKSGGWCMVTFGDGAEQEYLEARTKGGEAESDLALFKYFKMELFKGGRKGTKRSSVDDAEGISEDQKTRLPLIYVVSLALEYIKDVVINRLNKADSHTLKAFDIRWVLTVPAIWSSFGTTFMRTAALRAGLIQRENDMEHLRLCLEPEAACLTVEHHHRNVHKWENGMKVMVLDCGGGTIDITTHHVVSTNPLGLEELEEPAGGPWGSTTADAKFKLFIK 277
BLAST of mRNA_E_fasciculatus_S2_contig7220.15400.1 vs.
Match: Heat (shock protein 70-putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNB5_ECTSI) HSP 1 Score: 134 bits (337), Expect = 2.650e-30 Identity = 96/274 (35.04%), Postives = 142/274 (51.82%), Query Frame = 1
Query: 4 DFVVAIDLGTSCTAFSWKSIVDPAGPSVGVPDMKPNEDIIGKSPTTLLIAGSTGGDKMFRPTGAEAYGREAQLRYANGNIPHGAQ------LFKRFKM-IYDD------LLDAVTRSTSRKAEMMLMDIFVI--ALEYIKSVALRGMTLTHAVTAEHVTWVLTVPVCCSEPAKHFMREAAIKAGFIKGGDDDEGLVLCMEPIAACLALGNRLQ----WRMRDKYLVIDCGGGTVDISAFEVISSAPPSLQQLGEANGGPWGSTYVDTQFEAYLK 768
D V AIDLGTS TA+++ ++V +GVPD ++ + + T ++ D+ +G A+ Y + LFK FKM +Y +D + +L IFV+ A+EYIK+ L +++ + WV+TVP S K FMR A+ +AG I +D +GL LC+EP AACLA+ + Q W DK +V+DCGGGT+DI++ V SS P L +L E GG WGS+ VDT+F+A+L+
Sbjct: 5 DIVAAIDLGTSRTAYAY-TVVGREHIWLGVPDSPDDDRNVERKTLTAVLMQRCDEDEAEGGWRVAGFGDTAEEDYLTAKADEADEDRGSLVLFKFFKMELYQGGREQRARMDVDEPTAKAVGGEVLPMIFVVSKAIEYIKNQILDRVSMIAQEDDARLMWVVTVPAIWSNFGKRFMRAASHRAGLIADENDMQGLKLCLEPEAACLAVESSNQGVGSWHPGDKIMVLDCGGGTIDITSHLVESSDPLQLSELAEPCGGAWGSSIVDTRFKAFLQ 277
BLAST of mRNA_E_fasciculatus_S2_contig7220.15400.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE4_ECTSI) HSP 1 Score: 135 bits (339), Expect = 2.820e-30 Identity = 91/265 (34.34%), Postives = 133/265 (50.19%), Query Frame = 1
Query: 10 VVAIDLGTSCTAFSWKSIVDPAGPSVGVPDMK-PNEDIIGKSPTTLLIAGSTGGDKMFRPTGAEAYGREAQLRYANGNIPHGAQLFKRF-KMIYDDL---LDAVTRSTSRKAEMMLMDIFVIALEYIKSVALRGMTLTHA--VTAEHVTWVLTVPVCCSEPAKHFMREAAIKAGFIKGGDDDEGLVLCMEPIAACLALGNRLQ-----WRMRDKYLVIDCGGGTVDISAFEVISSAPPSLQQLGEANGGPWGSTYVDTQFEAYLK 768
VVAID+G TA+SWK+ P V +++ P E + KSP +LL+ R +G A+ + P G QLF+RF + ++ + LD + + ++ + LM+I V L +++ AL ++ +T + V WVLTVP E + MR AA+ + + G DDE LV C E IAACLA + L W + D YLV+DCGG TVD+ A V L + E GPWG+ D QF+ L+
Sbjct: 26 VVAIDVGKFGTAYSWKADEHPIPRGVRNLEIEQPREGTVRKSPNSLLV---------HRENRQVLFGDFAEGCFTGHASPVGGQLFRRFGRQLWLESSWSLDTPVKCSRNRSVVELMEILVYLLNHVRDAALLNLSTAGVPPMTVDGVKWVLTVPASLPEQQQEAMRTAAVMSSLVDDGHDDEHLVFCPEAIAACLAFQDNLSQDSLPWNVGDIYLVVDCGGVTVDLHAVGVCDMEKRELSLMHEGTSGPWGAENADKQFDILLQ 281
BLAST of mRNA_E_fasciculatus_S2_contig7220.15400.1 vs.
Match: heat (shock 70 kDa protein 12A-like isoform X1 n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DAG3_CRAVI) HSP 1 Score: 119 bits (298), Expect = 2.720e-25 Identity = 100/282 (35.46%), Postives = 146/282 (51.77%), Query Frame = 1
Query: 10 VVAIDLGTSCTAFSWKSI----VDPAGPSVGVPDMKPNEDIIGKSPTTLLIAGSTGGDKMFRPTGAEAYGREAQLRYAN--GNIPHGAQLF-KRFKMI-YDDLLDAVTRST-----SRKAEMMLMDIFVIALEYIKSVALRGMTLTH------AVTAEHVTWVLTVPVCCSEPAKHFMREAAIKAGFIKGGDDDEGLVLCMEPIAACLAL----------GNRLQ-WRMRDKYLVIDCGGGTVDISAFEVISSAPPSLQQLGEANGGPWGSTYVDTQFEAYL 765
+ AID GT+ + F++ S DP +V D P+ I K+PTTLL+ D+ F EA+G EA+ +YA N +G ++ +RFKM+ Y+ L +T+ + K E+ +++F A+ Y RG+ LT V E++ WVLTVP S+PAK FM EAA+ AG + L L +EP AA + GN L + + KYLV+D GGGTVDI+ EV +L++L +A+GG WG T VD F+ +L
Sbjct: 11 ICAIDFGTTFSGFAYSSKKEYDYDPLNIAVPNWDTPPSVQISYKTPTTLLL----NKDQNF-----EAFGYEAESKYAELVENEKNGEYIYIRRFKMLLYNTLSKRLTKEMMIKDITEKKEVKAIEVFKHAINYF-----RGLMLTTIDKKGLGVKEENIRWVLTVPAIWSDPAKQFMAEAAVMAGIPR-----TKLSLALEPEAASIFCNRIPLSKFEEGNGLGGFEVGKKYLVLDAGGGTVDITVHEVTQDK--TLKELEKASGGDWGGTCVDNYFKNFL 271 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7220.15400.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7220.15400.1 >prot_E_fasciculatus_S2_contig7220.15400.1 ID=prot_E_fasciculatus_S2_contig7220.15400.1|Name=mRNA_E_fasciculatus_S2_contig7220.15400.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=229bp MKPNEDIIGKSPTTLLIAGSTGGDKMFRPTGAEAYGREAQLRYANGNIPHback to top mRNA from alignment at E_fasciculatus_S2_contig7220:2297..7466+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7220.15400.1 ID=mRNA_E_fasciculatus_S2_contig7220.15400.1|Name=mRNA_E_fasciculatus_S2_contig7220.15400.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5170bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7220:2297..7466+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7220:2297..7466+ >mRNA_E_fasciculatus_S2_contig7220.15400.1 ID=mRNA_E_fasciculatus_S2_contig7220.15400.1|Name=mRNA_E_fasciculatus_S2_contig7220.15400.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=687bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7220:2297..7466+ (Ectocarpus fasciculatus EfasUO2)back to top |