mRNA_E_fasciculatus_S2_contig7208.15390.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7208.15390.1 vs.
Match: TLDc (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBZ9_ECTSI) HSP 1 Score: 618 bits (1594), Expect = 2.700e-223 Identity = 309/322 (95.96%), Postives = 314/322 (97.52%), Query Frame = 1
Query: 1 MRTVGTTALLWSCLQGVHSFTVPPQALGKTHRSLSAPSS-THVARVEHEDRTCRASRSRGTSSTCVRAKGGAGEEEAGEEQQDVIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDSKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTSKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGERIPFDDAIPFSLS 963
MRT GTTALLWSCLQGV+SFTVPPQALGKTHRSLSAPSS T V RVEHEDRTCR S SRG+ STCVRAKGG GEEEAGEEQQDVIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYD+KRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDT+KRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGE+IPFDDAIPFSLS
Sbjct: 1 MRTPGTTALLWSCLQGVNSFTVPPQALGKTHRSLSAPSSATVVTRVEHEDRTCRTSSSRGSRSTCVRAKGGTGEEEAGEEQQDVIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDAKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTNKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGEKIPFDDAIPFSLS 322
BLAST of mRNA_E_fasciculatus_S2_contig7208.15390.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NAM7_HETAK) HSP 1 Score: 320 bits (820), Expect = 8.580e-106 Identity = 162/247 (65.59%), Postives = 192/247 (77.73%), Query Frame = 1
Query: 229 GEEQQDVIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDSKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTSK--RAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGERIPFDDAIPFSLS 963
G+E QD +EK FS FFG K++ P G L R + FPDQ+PA K A+PV GDSKDMAV RPLLKQTELE RKLKLVYD+ +NGW P AFHKGVD GPG++V KTKGGAV+GGYNPKGWVGYGEYRPGLSAFLFTW DG+T +A+KLRKIGGAGLAV DKPE GP+FG+DG + M +R+ + LGSYYER+P G S+FA G++ E+VDLKAYVG+Y +GE IPF+DAIPFSL+
Sbjct: 63 GQEDQDPVEKLFSFFFGQKEEEPLG-LKRFNKETFPDQFPATKTEFADPVPGDSKDMAVFRPLLKQTELESRKLKLVYDANKNGWNPTAFHKGVDKLGPGVIVAKTKGGAVIGGYNPKGWVGYGEYRPGLSAFLFTWPDGNTVDYTKALKLRKIGGAGLAVIDKPEEGPVFGADGLCIRMAPKKQRIAQCSLGSYYERMPG--GKKSLFAQGESLANTELVDLKAYVGIYAKGEEIPFNDAIPFSLT 306
BLAST of mRNA_E_fasciculatus_S2_contig7208.15390.1 vs.
Match: TLDc (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK91_9STRA) HSP 1 Score: 301 bits (770), Expect = 5.090e-99 Identity = 154/252 (61.11%), Postives = 190/252 (75.40%), Query Frame = 1
Query: 232 EEQQDVIEKFFSMFFGNK---DDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDSKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTSKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQKGS-----ERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGERIPFDDAIPFSLS 963
E+QQD++E+FF FG K D+AP G + R+T++ FPDQYPA K A+PV GD+KDMA+ RP L QT LE RKLK VYD+ R+GW+PAAFH+GVD KGPG+V+ +T GGAVVGGYNPKGWVG EYRPGLSAFLFTW DGDTSKR +KLRK+GGAGLA +D+ GP FGS+G V + GS ER+ R KLG+YYER+P GG S+FAPG+ G A++ +LKA+VGVY + E IPFDD I S +
Sbjct: 4 EQQQDIVERFFGFVFGQKALDDEAPMG-MKRMTIENFPDQYPATKDRWADPVAGDTKDMALFRPALAQTMLEKRKLKCVYDAARDGWRPAAFHRGVDKKGPGVVLARTAGGAVVGGYNPKGWVGESEYRPGLSAFLFTWPDGDTSKRPVKLRKVGGAGLACYDRASTGPFFGSEGLCVPLDAGSGGGGAERVARCKLGAYYERMPD--GGNSMFAPGEKGA-AQLTELKAFVGVYAKDEEIPFDDVIYLSFT 251
BLAST of mRNA_E_fasciculatus_S2_contig7208.15390.1 vs.
Match: Hypothetical (protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EVG5_CHRCT) HSP 1 Score: 253 bits (646), Expect = 1.290e-78 Identity = 128/241 (53.11%), Postives = 166/241 (68.88%), Query Frame = 1
Query: 238 QQDVIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDSKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTSKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGERIPFDDAIPFSL 960
+ D IEK F +FFG + L R PD YPA K A+PV+GD ++ ++RPLLK T LE+ L+L YD+ R+GW+ A FH+ VD GP +VV +T+GGAV GGY PKG+ GYGEYR ++AFL+TW DGDT + +KL+K+GGAGLA D+PE GP FG++G + M GSER+ RSKLG YYER+P GG SIFA DN E+ +L+ YVGV+ GERIPFD AIPF++
Sbjct: 134 EPDFIEKLFGVFFGAPQEGEVAGLARTA--SAPDTYPATKTEFADPVEGDIEEATILRPLLKNTNLEYLPLRLAYDANRDGWRAADFHEKVDKTGPCIVVCETEGGAVCGGYAPKGFAGYGEYRGSIAAFLYTWPDGDTDRAPIKLQKMGGAGLATIDEPETGPRFGAEGLSIPMDPGSERIARSKLGPYYERMPD--GGGSIFAANDNSKRCELKELRVYVGVWPEGERIPFDGAIPFAI 370
BLAST of mRNA_E_fasciculatus_S2_contig7208.15390.1 vs.
Match: TLDc (domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZD4_PORPP) HSP 1 Score: 238 bits (607), Expect = 1.340e-73 Identity = 138/288 (47.92%), Postives = 194/288 (67.36%), Query Frame = 1
Query: 124 VARVEHEDRTCRASRSRGTSSTCVRAKGGAGEEEAGEEQQDVIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKD--MAVIRPLLKQTELEFRKLKLVYDSKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTSKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGM-------QKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGERIPFDDAIPFSL 960
VAR + + R SRSR + + + GA +++A EE DVIE+ K+ P G L R KFP+ +PAE QA+PV+GD KD + +IRP++ +T L+ R ++ V+D++ +GWK A+FH+ VD +GP +V+ +TKGGAVVGGY+PKGWVGYGE R ++AFLFTW DGDTSKR++KLRKIG A +A D+PE GP FG++G + + G+ER+ R KLG+YY++LP G S+FA G+ G + E+V L+A+VG+Y E IPF DA+PFSL
Sbjct: 26 VARAQTKWRLVHHSRSR---AVVGKTRLGAEQQDA-EEDLDVIERAMKWLGFKKEKTPFG-LARFDRDKFPELWPAELEEQADPVEGDEKDPDLQLIRPMMARTSLQTRPMECVFDAEVHGWKAASFHRCVDKRGPAVVLARTKGGAVVGGYSPKGWVGYGESRGSIAAFLFTWPDGDTSKRSIKLRKIGMASMASMDQPESGPRFGAEGLTIPLLDARATEYDGTERVARCKLGTYYDKLPD--GSKSLFAHGE-GLLTELVSLRAFVGIYGSDEEIPFLDALPFSL 305
BLAST of mRNA_E_fasciculatus_S2_contig7208.15390.1 vs.
Match: Hypothetical (protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFM7_9RHOD) HSP 1 Score: 235 bits (599), Expect = 1.840e-72 Identity = 127/252 (50.40%), Postives = 169/252 (67.06%), Query Frame = 1
Query: 235 EQQDVIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDSKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTSKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQK-------GSERMGRSKLGSYYERLPAAYGGASIFAPGDNG---GIAEMVDLKAYVGVYERGERIPFDDAIPFSL 960
E D++EK F +FFG K++ P G L R +FP+Q+PA AE V+GDSKD+A+ RPLL +T+L R L+LV+D+ +GW AFH+ VD +G G+V+ +T G V GGYNPKGWVGYGE R +++FLFTW DG+T+K AMK+RK+G A L+V D PE GP FG+D + +Q GSE+ RSKLGSYYERLP G + P + G + +K +VGVYE GE+IPF+DA+PFSL
Sbjct: 53 EDSDLLEKLFGVFFGKKEENPLG-LKRFDRDRFPEQFPAPLDEFAEAVQGDSKDVALFRPLLARTQLCRRSLRLVFDTDSDGWTAEAFHRAVDRQGAGVVLLRTVDGVVCGGYNPKGWVGYGESRGSVASFLFTWPDGNTNKPAMKMRKVGQAYLSVLDNPETGPQFGADSLVIPLQDTRLRGPDGSEKQARSKLGSYYERLPD---GRNCLFPDSSHPRKGYCYVDSVKVFVGVYEEGEQIPFNDALPFSL 300
BLAST of mRNA_E_fasciculatus_S2_contig7208.15390.1 vs.
Match: TLDc (domain-containing protein n=2 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZH24_9STRA) HSP 1 Score: 235 bits (599), Expect = 2.660e-72 Identity = 129/248 (52.02%), Postives = 161/248 (64.92%), Query Frame = 1
Query: 217 EEEAGEEQQDVIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDSKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTSKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGERIPFDDAIPFSL 960
+EE + D ++K FS+FFG K+ P G + R ++FP+QYPA AEPV D KDMAV+RP+LK T LE R LKL Y + R+GW P +FH+ VD G GLVV T+ G V GGYNPKGWVGYGE R ++AFL+ + G TS+ KLRK+GG LA D PE GP FG+D + ++K S R+ RSKLGSYYER P GG ++F G G + DLK Y GVY GE IPF DA PF+L
Sbjct: 71 DEEPDDFSDDPVDKIFSVFFGKKEATPMG-MKRFGRERFPEQYPAVLDEWAEPVASDDKDMAVLRPMLKNTNLETRGLKLTYSANRDGWDPVSFHRKVDKLGGGLVVCTTEDGLVCGGYNPKGWVGYGEARGSIAAFLYVFTKG-TSELPTKLRKVGGPSLAQQDLPETGPSFGADSLVIPLEKSSPRVARSKLGSYYERFPG--GGNTLF--GKRGSSVRLKDLKVYHGVYAEGEYIPFTDAEPFAL 312
BLAST of mRNA_E_fasciculatus_S2_contig7208.15390.1 vs.
Match: Hypothetical (protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DY99_9CRYP) HSP 1 Score: 239 bits (611), Expect = 1.030e-71 Identity = 129/245 (52.65%), Postives = 158/245 (64.49%), Query Frame = 1
Query: 250 IEKFFSMFFGNKDDAPGG-DLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDSKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTSKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQK-------GSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGERIPFDDAIPFSL 960
EKFF+ FG +P L R KFP+ YPA A PV D RPLL +T LE R+LKLV+D+ R+GW P AFH VD GPG+V+ +T+ GAVVGGYNPKGWVGYGEYR ++AFLF+W DGDTSK A+KLRK+GGAGLA D PE GP FG+DG + ++ G ER+ R KLG YYE+ P G +IF + A + DLK YVGVYE GE IP++DA+PF L
Sbjct: 271 FEKFFASLFGKIGASPEQVGLKRFDQSKFPELYPATLTEFAAPVASDDATAQQFRPLLAKTSLEKRELKLVFDANRDGWTPGAFHGAVDKLGPGVVLARTEQGAVVGGYNPKGWVGYGEYRGSIAAFLFSWPDGDTSKPAIKLRKVGGAGLACIDDPESGPRFGADGLHIPLEAPRSEAEAGRERLARCKLGPYYEKRPD--GSNTIFTKAEKA-TATLTDLKVYVGVYEEGEEIPYNDALPFQL 512
BLAST of mRNA_E_fasciculatus_S2_contig7208.15390.1 vs.
Match: TLDc (domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JKV5_9EUKA) HSP 1 Score: 228 bits (580), Expect = 1.300e-70 Identity = 122/231 (52.81%), Postives = 153/231 (66.23%), Query Frame = 1
Query: 268 MFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDSKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTSKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGERIPFDDAIPFSL 960
MFFG+ L R PD YPA K A PV+GD +MA+IRPLLK T LE L+LVYD+ ++GW A+FH GVD +GP +V+ KTKGG V GGY PKG+ G+GEYR ++AFLFTW DGD + A+KL+K GG LA D+PE GP FG+DG V M+ G ER+ SKLG YYE +P G S+F PGD G E+ ++AY G + GERIPF+ AIPF+L
Sbjct: 1 MFFGDPQQGDVAGLRRTAGA--PDTYPATKTEFALPVEGDDTEMALIRPLLKNTNLELLPLRLVYDANKDGWNAASFHGGVDAQGPCVVLCKTKGGCVCGGYAPKGFAGFGEYRGSIAAFLFTWPDGDVRQPAVKLQKQGGGSLATIDEPETGPRFGADGLTVFMRPGRERLATSKLGPYYEVMPD--GRRSVFGPGD-GMTCELTSVRAYAGCWPEGERIPFNGAIPFAL 226
BLAST of mRNA_E_fasciculatus_S2_contig7208.15390.1 vs.
Match: TLDc (domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPM3_CHOCR) HSP 1 Score: 225 bits (574), Expect = 1.310e-68 Identity = 123/258 (47.67%), Postives = 170/258 (65.89%), Query Frame = 1
Query: 211 AGEEEAGEEQQDVIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDSKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTSKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGM--------QKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGERIPFDDAIPFSL 960
A ++E+ + + D++E+ ++ FG K P G L R +FP+ YPA A+PV D+ +MA+ RPLL +T+L+ R+++L+YD+ R+GW FH+ ++ KG +V+ T G AV GGYNPKG+VGYGE R +AFLFTW DGDTSK A+KLRK+GGA LAV D+PE GP FG+D V + + +R+ SKLGSYYER P GG ++FA G+N + +LK + GVY GE IPFDDA+PFSL
Sbjct: 54 ARDKESNKGEMDIVERVYTAIFGAKQAEPFG-LKRFDRDRFPELYPATLDEFADPVPADTPEMALFRPLLARTQLQTREIQLLYDANRDGWSADTFHEALNRKGASVVMASTAG-AVFGGYNPKGFVGYGESRGSKAAFLFTWPDGDTSKPAVKLRKVGGAALAVVDEPETGPKFGADSLVVPLRPPRANWGESQKDRIAYSKLGSYYERRPD--GGNTLFANGENPKGEVLQELKVFAGVYADGEEIPFDDALPFSL 307 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7208.15390.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7208.15390.1 >prot_E_fasciculatus_S2_contig7208.15390.1 ID=prot_E_fasciculatus_S2_contig7208.15390.1|Name=mRNA_E_fasciculatus_S2_contig7208.15390.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=322bp MRTVGTTALLWSCLQGVHSFTVPPQALGKTHRSLSAPSSTHVARVEHEDRback to top mRNA from alignment at E_fasciculatus_S2_contig7208:1552..6615- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7208.15390.1 ID=mRNA_E_fasciculatus_S2_contig7208.15390.1|Name=mRNA_E_fasciculatus_S2_contig7208.15390.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5064bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7208:1552..6615- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7208:1552..6615- >mRNA_E_fasciculatus_S2_contig7208.15390.1 ID=mRNA_E_fasciculatus_S2_contig7208.15390.1|Name=mRNA_E_fasciculatus_S2_contig7208.15390.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=966bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7208:1552..6615- (Ectocarpus fasciculatus EfasUO2)back to top |