mRNA_E_fasciculatus_S2_contig7208.15390.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7208.15390.1
Unique NamemRNA_E_fasciculatus_S2_contig7208.15390.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7208.15390.1 vs.
Match: TLDc (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBZ9_ECTSI)

HSP 1 Score: 618 bits (1594), Expect = 2.700e-223
Identity = 309/322 (95.96%), Postives = 314/322 (97.52%), Query Frame = 1
Query:    1 MRTVGTTALLWSCLQGVHSFTVPPQALGKTHRSLSAPSS-THVARVEHEDRTCRASRSRGTSSTCVRAKGGAGEEEAGEEQQDVIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDSKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTSKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGERIPFDDAIPFSLS 963
            MRT GTTALLWSCLQGV+SFTVPPQALGKTHRSLSAPSS T V RVEHEDRTCR S SRG+ STCVRAKGG GEEEAGEEQQDVIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYD+KRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDT+KRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGE+IPFDDAIPFSLS
Sbjct:    1 MRTPGTTALLWSCLQGVNSFTVPPQALGKTHRSLSAPSSATVVTRVEHEDRTCRTSSSRGSRSTCVRAKGGTGEEEAGEEQQDVIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDAKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTNKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGEKIPFDDAIPFSLS 322          
BLAST of mRNA_E_fasciculatus_S2_contig7208.15390.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NAM7_HETAK)

HSP 1 Score: 320 bits (820), Expect = 8.580e-106
Identity = 162/247 (65.59%), Postives = 192/247 (77.73%), Query Frame = 1
Query:  229 GEEQQDVIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDSKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTSK--RAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGERIPFDDAIPFSLS 963
            G+E QD +EK FS FFG K++ P G L R   + FPDQ+PA K   A+PV GDSKDMAV RPLLKQTELE RKLKLVYD+ +NGW P AFHKGVD  GPG++V KTKGGAV+GGYNPKGWVGYGEYRPGLSAFLFTW DG+T    +A+KLRKIGGAGLAV DKPE GP+FG+DG  + M    +R+ +  LGSYYER+P   G  S+FA G++    E+VDLKAYVG+Y +GE IPF+DAIPFSL+
Sbjct:   63 GQEDQDPVEKLFSFFFGQKEEEPLG-LKRFNKETFPDQFPATKTEFADPVPGDSKDMAVFRPLLKQTELESRKLKLVYDANKNGWNPTAFHKGVDKLGPGVIVAKTKGGAVIGGYNPKGWVGYGEYRPGLSAFLFTWPDGNTVDYTKALKLRKIGGAGLAVIDKPEEGPVFGADGLCIRMAPKKQRIAQCSLGSYYERMPG--GKKSLFAQGESLANTELVDLKAYVGIYAKGEEIPFNDAIPFSLT 306          
BLAST of mRNA_E_fasciculatus_S2_contig7208.15390.1 vs.
Match: TLDc (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK91_9STRA)

HSP 1 Score: 301 bits (770), Expect = 5.090e-99
Identity = 154/252 (61.11%), Postives = 190/252 (75.40%), Query Frame = 1
Query:  232 EEQQDVIEKFFSMFFGNK---DDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDSKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTSKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQKGS-----ERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGERIPFDDAIPFSLS 963
            E+QQD++E+FF   FG K   D+AP G + R+T++ FPDQYPA K   A+PV GD+KDMA+ RP L QT LE RKLK VYD+ R+GW+PAAFH+GVD KGPG+V+ +T GGAVVGGYNPKGWVG  EYRPGLSAFLFTW DGDTSKR +KLRK+GGAGLA +D+   GP FGS+G  V +  GS     ER+ R KLG+YYER+P   GG S+FAPG+ G  A++ +LKA+VGVY + E IPFDD I  S +
Sbjct:    4 EQQQDIVERFFGFVFGQKALDDEAPMG-MKRMTIENFPDQYPATKDRWADPVAGDTKDMALFRPALAQTMLEKRKLKCVYDAARDGWRPAAFHRGVDKKGPGVVLARTAGGAVVGGYNPKGWVGESEYRPGLSAFLFTWPDGDTSKRPVKLRKVGGAGLACYDRASTGPFFGSEGLCVPLDAGSGGGGAERVARCKLGAYYERMPD--GGNSMFAPGEKGA-AQLTELKAFVGVYAKDEEIPFDDVIYLSFT 251          
BLAST of mRNA_E_fasciculatus_S2_contig7208.15390.1 vs.
Match: Hypothetical (protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EVG5_CHRCT)

HSP 1 Score: 253 bits (646), Expect = 1.290e-78
Identity = 128/241 (53.11%), Postives = 166/241 (68.88%), Query Frame = 1
Query:  238 QQDVIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDSKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTSKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGERIPFDDAIPFSL 960
            + D IEK F +FFG   +     L R      PD YPA K   A+PV+GD ++  ++RPLLK T LE+  L+L YD+ R+GW+ A FH+ VD  GP +VV +T+GGAV GGY PKG+ GYGEYR  ++AFL+TW DGDT +  +KL+K+GGAGLA  D+PE GP FG++G  + M  GSER+ RSKLG YYER+P   GG SIFA  DN    E+ +L+ YVGV+  GERIPFD AIPF++
Sbjct:  134 EPDFIEKLFGVFFGAPQEGEVAGLARTA--SAPDTYPATKTEFADPVEGDIEEATILRPLLKNTNLEYLPLRLAYDANRDGWRAADFHEKVDKTGPCIVVCETEGGAVCGGYAPKGFAGYGEYRGSIAAFLYTWPDGDTDRAPIKLQKMGGAGLATIDEPETGPRFGAEGLSIPMDPGSERIARSKLGPYYERMPD--GGGSIFAANDNSKRCELKELRVYVGVWPEGERIPFDGAIPFAI 370          
BLAST of mRNA_E_fasciculatus_S2_contig7208.15390.1 vs.
Match: TLDc (domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZD4_PORPP)

HSP 1 Score: 238 bits (607), Expect = 1.340e-73
Identity = 138/288 (47.92%), Postives = 194/288 (67.36%), Query Frame = 1
Query:  124 VARVEHEDRTCRASRSRGTSSTCVRAKGGAGEEEAGEEQQDVIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKD--MAVIRPLLKQTELEFRKLKLVYDSKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTSKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGM-------QKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGERIPFDDAIPFSL 960
            VAR + + R    SRSR   +   + + GA +++A EE  DVIE+        K+  P G L R    KFP+ +PAE   QA+PV+GD KD  + +IRP++ +T L+ R ++ V+D++ +GWK A+FH+ VD +GP +V+ +TKGGAVVGGY+PKGWVGYGE R  ++AFLFTW DGDTSKR++KLRKIG A +A  D+PE GP FG++G  + +         G+ER+ R KLG+YY++LP   G  S+FA G+ G + E+V L+A+VG+Y   E IPF DA+PFSL
Sbjct:   26 VARAQTKWRLVHHSRSR---AVVGKTRLGAEQQDA-EEDLDVIERAMKWLGFKKEKTPFG-LARFDRDKFPELWPAELEEQADPVEGDEKDPDLQLIRPMMARTSLQTRPMECVFDAEVHGWKAASFHRCVDKRGPAVVLARTKGGAVVGGYSPKGWVGYGESRGSIAAFLFTWPDGDTSKRSIKLRKIGMASMASMDQPESGPRFGAEGLTIPLLDARATEYDGTERVARCKLGTYYDKLPD--GSKSLFAHGE-GLLTELVSLRAFVGIYGSDEEIPFLDALPFSL 305          
BLAST of mRNA_E_fasciculatus_S2_contig7208.15390.1 vs.
Match: Hypothetical (protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFM7_9RHOD)

HSP 1 Score: 235 bits (599), Expect = 1.840e-72
Identity = 127/252 (50.40%), Postives = 169/252 (67.06%), Query Frame = 1
Query:  235 EQQDVIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDSKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTSKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQK-------GSERMGRSKLGSYYERLPAAYGGASIFAPGDNG---GIAEMVDLKAYVGVYERGERIPFDDAIPFSL 960
            E  D++EK F +FFG K++ P G L R    +FP+Q+PA     AE V+GDSKD+A+ RPLL +T+L  R L+LV+D+  +GW   AFH+ VD +G G+V+ +T  G V GGYNPKGWVGYGE R  +++FLFTW DG+T+K AMK+RK+G A L+V D PE GP FG+D   + +Q        GSE+  RSKLGSYYERLP    G +   P  +    G   +  +K +VGVYE GE+IPF+DA+PFSL
Sbjct:   53 EDSDLLEKLFGVFFGKKEENPLG-LKRFDRDRFPEQFPAPLDEFAEAVQGDSKDVALFRPLLARTQLCRRSLRLVFDTDSDGWTAEAFHRAVDRQGAGVVLLRTVDGVVCGGYNPKGWVGYGESRGSVASFLFTWPDGNTNKPAMKMRKVGQAYLSVLDNPETGPQFGADSLVIPLQDTRLRGPDGSEKQARSKLGSYYERLPD---GRNCLFPDSSHPRKGYCYVDSVKVFVGVYEEGEQIPFNDALPFSL 300          
BLAST of mRNA_E_fasciculatus_S2_contig7208.15390.1 vs.
Match: TLDc (domain-containing protein n=2 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZH24_9STRA)

HSP 1 Score: 235 bits (599), Expect = 2.660e-72
Identity = 129/248 (52.02%), Postives = 161/248 (64.92%), Query Frame = 1
Query:  217 EEEAGEEQQDVIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDSKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTSKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGERIPFDDAIPFSL 960
            +EE  +   D ++K FS+FFG K+  P G + R   ++FP+QYPA     AEPV  D KDMAV+RP+LK T LE R LKL Y + R+GW P +FH+ VD  G GLVV  T+ G V GGYNPKGWVGYGE R  ++AFL+ +  G TS+   KLRK+GG  LA  D PE GP FG+D   + ++K S R+ RSKLGSYYER P   GG ++F  G  G    + DLK Y GVY  GE IPF DA PF+L
Sbjct:   71 DEEPDDFSDDPVDKIFSVFFGKKEATPMG-MKRFGRERFPEQYPAVLDEWAEPVASDDKDMAVLRPMLKNTNLETRGLKLTYSANRDGWDPVSFHRKVDKLGGGLVVCTTEDGLVCGGYNPKGWVGYGEARGSIAAFLYVFTKG-TSELPTKLRKVGGPSLAQQDLPETGPSFGADSLVIPLEKSSPRVARSKLGSYYERFPG--GGNTLF--GKRGSSVRLKDLKVYHGVYAEGEYIPFTDAEPFAL 312          
BLAST of mRNA_E_fasciculatus_S2_contig7208.15390.1 vs.
Match: Hypothetical (protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DY99_9CRYP)

HSP 1 Score: 239 bits (611), Expect = 1.030e-71
Identity = 129/245 (52.65%), Postives = 158/245 (64.49%), Query Frame = 1
Query:  250 IEKFFSMFFGNKDDAPGG-DLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDSKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTSKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQK-------GSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGERIPFDDAIPFSL 960
             EKFF+  FG    +P    L R    KFP+ YPA     A PV  D       RPLL +T LE R+LKLV+D+ R+GW P AFH  VD  GPG+V+ +T+ GAVVGGYNPKGWVGYGEYR  ++AFLF+W DGDTSK A+KLRK+GGAGLA  D PE GP FG+DG  + ++        G ER+ R KLG YYE+ P   G  +IF   +    A + DLK YVGVYE GE IP++DA+PF L
Sbjct:  271 FEKFFASLFGKIGASPEQVGLKRFDQSKFPELYPATLTEFAAPVASDDATAQQFRPLLAKTSLEKRELKLVFDANRDGWTPGAFHGAVDKLGPGVVLARTEQGAVVGGYNPKGWVGYGEYRGSIAAFLFSWPDGDTSKPAIKLRKVGGAGLACIDDPESGPRFGADGLHIPLEAPRSEAEAGRERLARCKLGPYYEKRPD--GSNTIFTKAEKA-TATLTDLKVYVGVYEEGEEIPYNDALPFQL 512          
BLAST of mRNA_E_fasciculatus_S2_contig7208.15390.1 vs.
Match: TLDc (domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JKV5_9EUKA)

HSP 1 Score: 228 bits (580), Expect = 1.300e-70
Identity = 122/231 (52.81%), Postives = 153/231 (66.23%), Query Frame = 1
Query:  268 MFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDSKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTSKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGERIPFDDAIPFSL 960
            MFFG+        L R      PD YPA K   A PV+GD  +MA+IRPLLK T LE   L+LVYD+ ++GW  A+FH GVD +GP +V+ KTKGG V GGY PKG+ G+GEYR  ++AFLFTW DGD  + A+KL+K GG  LA  D+PE GP FG+DG  V M+ G ER+  SKLG YYE +P   G  S+F PGD G   E+  ++AY G +  GERIPF+ AIPF+L
Sbjct:    1 MFFGDPQQGDVAGLRRTAGA--PDTYPATKTEFALPVEGDDTEMALIRPLLKNTNLELLPLRLVYDANKDGWNAASFHGGVDAQGPCVVLCKTKGGCVCGGYAPKGFAGFGEYRGSIAAFLFTWPDGDVRQPAVKLQKQGGGSLATIDEPETGPRFGADGLTVFMRPGRERLATSKLGPYYEVMPD--GRRSVFGPGD-GMTCELTSVRAYAGCWPEGERIPFNGAIPFAL 226          
BLAST of mRNA_E_fasciculatus_S2_contig7208.15390.1 vs.
Match: TLDc (domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPM3_CHOCR)

HSP 1 Score: 225 bits (574), Expect = 1.310e-68
Identity = 123/258 (47.67%), Postives = 170/258 (65.89%), Query Frame = 1
Query:  211 AGEEEAGEEQQDVIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDSKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTSKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGM--------QKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGERIPFDDAIPFSL 960
            A ++E+ + + D++E+ ++  FG K   P G L R    +FP+ YPA     A+PV  D+ +MA+ RPLL +T+L+ R+++L+YD+ R+GW    FH+ ++ KG  +V+  T G AV GGYNPKG+VGYGE R   +AFLFTW DGDTSK A+KLRK+GGA LAV D+PE GP FG+D   V +        +   +R+  SKLGSYYER P   GG ++FA G+N     + +LK + GVY  GE IPFDDA+PFSL
Sbjct:   54 ARDKESNKGEMDIVERVYTAIFGAKQAEPFG-LKRFDRDRFPELYPATLDEFADPVPADTPEMALFRPLLARTQLQTREIQLLYDANRDGWSADTFHEALNRKGASVVMASTAG-AVFGGYNPKGFVGYGESRGSKAAFLFTWPDGDTSKPAVKLRKVGGAALAVVDEPETGPKFGADSLVVPLRPPRANWGESQKDRIAYSKLGSYYERRPD--GGNTLFANGENPKGEVLQELKVFAGVYADGEEIPFDDALPFSL 307          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7208.15390.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
TLDc2.700e-22395.96domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Hypothetical8.580e-10665.59protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
TLDc5.090e-9961.11domain-containing protein n=1 Tax=Tribonema minus ... [more]
Hypothetical1.290e-7853.11protein n=2 Tax=Chrysotila carterae TaxID=13221 Re... [more]
TLDc1.340e-7347.92domain-containing protein n=1 Tax=Porphyridium pur... [more]
Hypothetical1.840e-7250.40protein n=1 Tax=Compsopogon caeruleus TaxID=31354 ... [more]
TLDc2.660e-7252.02domain-containing protein n=2 Tax=Pseudo-nitzschia... [more]
Hypothetical1.030e-7152.65protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S... [more]
TLDc1.300e-7052.81domain-containing protein n=1 Tax=Chrysochromulina... [more]
TLDc1.310e-6847.67domain-containing protein n=1 Tax=Chondrus crispus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7208contigE_fasciculatus_S2_contig7208:1552..6615 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score624.0
Seed ortholog evalue3.9e-176
Seed eggNOG ortholog2880.D8LBZ9
Model size966
Hectar predicted targeting categorysignal peptide
Exons7
EggNOG free text desc.TLD
EggNOG OGs2BGQI@1,2S19X@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-20_003910.1
Cds size966
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7208.15390.1prot_E_fasciculatus_S2_contig7208.15390.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7208 1552..6615 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842384.197723-CDS-E_fasciculatus_S2_contig7208:1551..17141696842384.197723-CDS-E_fasciculatus_S2_contig7208:1551..1714Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7208 1552..1714 -
1696842384.2157722-CDS-E_fasciculatus_S2_contig7208:2345..24671696842384.2157722-CDS-E_fasciculatus_S2_contig7208:2345..2467Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7208 2346..2467 -
1696842384.2280343-CDS-E_fasciculatus_S2_contig7208:2769..28811696842384.2280343-CDS-E_fasciculatus_S2_contig7208:2769..2881Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7208 2770..2881 -
1696842384.2380066-CDS-E_fasciculatus_S2_contig7208:3414..35471696842384.2380066-CDS-E_fasciculatus_S2_contig7208:3414..3547Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7208 3415..3547 -
1696842384.2480946-CDS-E_fasciculatus_S2_contig7208:4237..44071696842384.2480946-CDS-E_fasciculatus_S2_contig7208:4237..4407Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7208 4238..4407 -
1696842384.2570279-CDS-E_fasciculatus_S2_contig7208:6121..62921696842384.2570279-CDS-E_fasciculatus_S2_contig7208:6121..6292Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7208 6122..6292 -
1696842384.2660484-CDS-E_fasciculatus_S2_contig7208:6520..66151696842384.2660484-CDS-E_fasciculatus_S2_contig7208:6520..6615Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7208 6521..6615 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7208.15390.1

>prot_E_fasciculatus_S2_contig7208.15390.1 ID=prot_E_fasciculatus_S2_contig7208.15390.1|Name=mRNA_E_fasciculatus_S2_contig7208.15390.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=322bp
MRTVGTTALLWSCLQGVHSFTVPPQALGKTHRSLSAPSSTHVARVEHEDR
TCRASRSRGTSSTCVRAKGGAGEEEAGEEQQDVIEKFFSMFFGNKDDAPG
GDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKL
KLVYDSKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYG
EYRPGLSAFLFTWRDGDTSKRAMKLRKIGGAGLAVWDKPECGPLFGSDGF
GVGMQKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAY
VGVYERGERIPFDDAIPFSLS*
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mRNA from alignment at E_fasciculatus_S2_contig7208:1552..6615-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7208.15390.1 ID=mRNA_E_fasciculatus_S2_contig7208.15390.1|Name=mRNA_E_fasciculatus_S2_contig7208.15390.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5064bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7208:1552..6615- (Ectocarpus fasciculatus EfasUO2)
ATGCGGACAGTAGGAACTACCGCTCTCTTGTGGTCTTGTCTTCAGGGTGT GCACTCGTTCACGGTCCCTCCACAGGCATTGGGCAAGACACACAGGTGAC AAGCACATTTTTATTTTTTGCTGTTTCGTGCAACAACAGCAGCAGCACCA GCAGCACCAGCTTCAGCACGTGCTCGCCTCATCAAGACTCACACAGAGAC AGCAGGGGCGCCTGGCAGGCACACCACGGAAGGAAGTACTTGTGCTCTTG TGCTCCTGCCCATTCATCACAGGTTCCCAACCTAAGCACCAGGAACTGCT GCGGTACTCTACTACTTTTACAGGTCCCTCTCTGCACCAAGCTCCACCCA CGTCGCGCGGGTTGAACATGAAGATCGTACATGCCGTGCCAGCAGGAGCA GGGGCACCAGCAGCACATGCGTGAGGGCGAAGGGAGGTGCGGGAGAGGAA GAGGCGGGGGAAGAACAACAAGATGTCATCGAGAAGTTTTTCAGGTGCGT GGTCAAGCACCAGAGGGGCCAGGGGGCAGCCTTTTACAATATTTTAGTTG CACCGCTTCCTGTGCAATGTGATGACGTCCTCCCTATCACAGTGCAGCCC AACTGAACAACCGGAGCGACTCTACGAAATAGCTTGTGTGCGCGGGGGCG AAATCTGGCATGGGATGTGTTGCTTGTGTGCTTTATCTAGGGGTTGTTGC CATTCTAAACATTGGTGATATTTCTGAGCGATGGAAGGGTGACCTCGGTT TTCAACAAAAGGGCACGCACTGGTGTGGGTGCGCAGCAGCAGCAGTTGTA GCGTTGCACGTCCCCGGGCAGAAAATGTGGTACAAAACCCACACGAATGC CCATTTTTTTTGTTACGACTACGGCACGGCAGTGTTGGAGCCCGACAAAA CCCACGCTCATTTATAGTTTTCACGAAGAGAGGGGTCACTCGAGCGTATG GGCGTTTGGGCCTTCGCACGCGTCGTGTGGGAGGTAGGCATTGAGCTGCC GAACACCGCCGAGACGGCTTCGGGACCAAGCCCGCGGACAAGGGTTGCCT TCATTACTGCTGCATTCACCGGTCGCCTTTGTGCAACCTCGAGATGTTCA TGTGTAACCTTTACACCTACGACCTACTTCCCGATCGCATTCCCGACCTA GGACACGAAGTGAAGTCATGAGCGGCAAGATTTGTTGTATATCAGCTCTT GCCGTATCCGGCAGCATCTCGGTTCAACTTTGAATTGCCCAACCTTAGAG GGCCTATGTCAGCGCCGGAAGCCGGAGCTAGTTGTCGCCAATCTGAAGCA GCCCCCCCCGGTTTCACGAGGGTTGCCTCTATGCTCCGGCCGTGTCCCTT AAAGTGTGCGCCGATGACACCATGATGACGAAAATTTCCCGTCTAAGACA TGTATAACCACACGCTCACAGCAGCGAACGCAGCGGCATCACCACGCCAC CAAACAGGCCACCAAGACAGCAGCGCAACAGCAGTTTAGGAATAGTCTAG GCAGGCTACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG CACGGCAGAACAGGCGTATTCGTGTGACCGTTAGAAGCGCAACCCTCGTA AAGCAACCTCGCTTGGTCGTTGAGGTGTAGATACCAATATGCAAGAACCA TTTCGTGGCGAACTATCGACATCTACTACAATATAGTACAACGTTTTCCT TGTCTCGAGAGTTTTTTATTCGCATTCGCACGAGGCGCACTAGTATACGC GAGCTTGAGCGATACCCACCCGAACCATGCTGGCGTACCGCGTGCCAACT CACAGCTAGCAACAGCAGTCACGAGGACTGGGAGCGTGCGTGCGTACCGG CAGCTATACGGCTGTCTCTTCGTTGACAGCAGGTTACGCTATGTCGTATC TACAAGCGGGCGGGGGCTGCCGGATCCCTGTTTTGCGGTGACGCAGCGAG TATGATTGATTGGTTTGACGATATGACGGACCCGGCTGCACGATCTTCCA TTTGCTTCACACCCTCTGTGAAAGCTGCCCCAGCGTGCGAACACCAGATG GAAGCTGGCACCTGCCGCCCCAGAGCAAGGGAATGATTCACTACTGACTG TCTTCAAGCTTACCGCCGCTGCTCTCAATAAACGCCGTGCTTGCCGCCGA TGCTGTTGCTGCTGCTGGTACCCTCCCCCACCCCCTACGTTTTCTTCCCC AAATGCAGCATGTTTTTCGGGAACAAGGACGATGCGCCGGGAGGGGACCT GGATCGCATCACGGTCAAGAAGTTTCCGGACCAGTATCCCGCAGAGAAAA TTCTCCAGGCAGAGCCGGTGAAAGGGGACTCCAAAGACATGGCCGTCATC CGGCCGCTGCTCAAGCAAACCGAGCTAGGTGTGCGATATGCGAAGTCGTG ATTGTTGTTGTTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGTTGTTGT TGTCTTCCCCTGAGAAAATCTGTTCTGGTCTCTGCCCAGTAGTGCCTGCT ATCATCCGTTGAGAGAATGATCCGGACTGGGAGTAGCGTGTCGTGCAGAC GTGTGTGGGTAGGGTATCGGAAACTCGGCGGACTCGTGACAAGGAGAAAG TTTTGTTGTGTGTCAACCCTGCCTCATCCTCTCACGCACGCCCCAACCCA GGGGCAAGGCGAGGCCATATGCAGTAGGGGTGCACGTAGCACACCCTGGA AATATCCATACCACGTACCACACAAATTACCCGGTATTCTGCTCTGTCAC ATTCCATGGGAACATACTGCTGTACCATCCACCCGTCATTTTGCTACAAG CATCTCTATCACCCGTTCCGGTTTCAGCTGACGCGGATACCTTCCGTGGT CGTAGCCCAACTACGCAAAAAAGGTACATAACACTGGTGACAGTTAAGGT CAAGGACGTCTATTTAGCAAGCATTCCCACGCGCTGTTAAAAAAGTCTTC CAAGACCCCGAACCCTTCTTGTATAAAGGCCGCGTGCGAAACAAAGGGTG TTAACCTGTTTACTCTTTTGTTCTGCTGGGCTGCTGCTACGCACCTGGCG CACCTCCTCTTGTGACAGAATTCCGGAAGCTCAAGCTGGTGTACGACTCG AAGCGAAACGGATGGAAGCCTGCAGCGTTCCACAAGGGGGTGGATTTCAA GGGCCCCGGGCTTGTGGTGGGCAAAACCAAGGGAGGGGCCGTCGTTGGGG GGTACGTCAGAGAGTATACCGTAGGCTTCATAAGATGCCACACCCCCTGA ACCGAATTTCGAAGCTCTCCAATACTCAACGACGACGAAGATGTGACAAT AAAGTTATTAGTTTTCGGGAAGCTCTAGTCGAGACAGTTCCAGTGCCAAA CCTTTCCGGCACCGTCAACTTCAGTTAATTTTTTTTCCTGCCGAATATTC GAGTTGTACAGATCGGGCCAGGGGGTGTGATATCTTGTGCAACCTACGGT AACAGAGAAACACAAAGGTGGCATGCTGCTGTGTATAGCAGGCGTCGCGT ACGGAAGGAGCCTACGTCGTCAATAGATTCCATCATATCGATTTGTTTTT GTTGTCATAATGGTGAAATTCCACTCACAACACCAACCACTGCTGTGTTG GATTGTTTTCCCTGCAACATATCCGGGTGATGCCTTGTGTTTTCGGCAAG TGGCGAAGGTCATGTTGAAAGGACCCACCTTAACAGACGCAGCGCGAGAT CTAGCCTAACCAATCACACGCGTGTCCGGCGCAGGTACAACCCCAAAGGG TGGGTGGGGTACGGAGAGTACAGACCGGGCTTGTCGGCGTTCTTATTCAC GTGGCGGGACGGGGACACCTCCAAGAGAGCGATGAAGCTCAGAAAGGTTA GCGACAAGCGGGTGGTGCGAAGTTCGTGAGAACACTTTGGGTGCTTTGAC GAAGAGAGGGGGAGGAGGTAGTGGAAGTTTGGAGGTGTGGCTAAAGGCCA TGCCATGTCGCATCGGGCAAGCACGCTTCCGTTTTCGACGTGGGGGAAGG AGAGCACCGACCACACCCGCACCACAACAGCCTGCCACGAAACGACCAAC ACACCCCTACTCCTCCTCCATGGACCCTGATCAAACCCCATACGCCCTTC GTATCCTTCGGTTCCGCCGCTCTTCTGTGTGTCCCGACGAAACGCTAGAT TGGGGGGGCGGGGCTCGCTGTCTGGGACAAGCCGGAGTGTGGCCCTTTGT TCGGCTCGGATGGTTTCGGGGTGGGGATGCAGAAGGGCTCGGAGCGAATG GGCAGGAGTAAGCTGGGCAGGTGCGTATGTGTTGTTTTGATTAGCATCAA CCGCGCGAGCCGGCTGACCAATTGTTTTCTGATCTTTTCGTTGCTGGCAT GGACTGCGTGTGACAATCTTCGTGCGAAAGCGTCATGGGAGAGACTAGCC TATTCTCTGGATAAAAGACGAATCCGGTAGCAGGAAGAGAAAATCGGTTG TCTACACACGTGTTGTATTGTTTTCGTGTCAGCACCTTCCTGTATACGGG ACTCGAGCTACGTGTACTTGCGCGGTAGTCTTTCTGTGTTTGTGTCTATT TTTCCGAATACTTGCGTGATCGGTGTGAAGTTGTTAGACGAGCTCCGTGT GACTAGTGCAACGGCCTCCCGATGCGGGGCTATTAACAAGGCACCACTCG AGGCCGCTTCTTGACGAGCCTTGAGGGGGGGGGTGGTATCTCAAGTTGGA AAGGGGAGGGGGGCTAGTTGTCATGATGGTCCCGGTGTTTTGCGCTTCGG TACAAAACGAAGTCGATCGATCCTGTCTTCTGCTCATGGCGGAGGGACTC TGCACCAGTAACACGATTGATTGGAAAACCTTCACCTTGCCCCCGTCCAC GTCGCCGACTGCTTCGGCCGCCCGTATGTTTTACGATGCCACGCGAAACA GCTACTACGAGAGGCTTCCTGCTGCCTACGGAGGAGCGAGCATCTTCGCC CCGGGAGACAACGGCGGCATCGCGGAGATGGTGGATCTCAAGGCGTACGT TGGCGTTTACGAGAGGGGGGAGAGGATCCCCTTCGACGACGCGATTCCTT TCTCTCTCAGCTGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7208:1552..6615-

>mRNA_E_fasciculatus_S2_contig7208.15390.1 ID=mRNA_E_fasciculatus_S2_contig7208.15390.1|Name=mRNA_E_fasciculatus_S2_contig7208.15390.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=966bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7208:1552..6615- (Ectocarpus fasciculatus EfasUO2)
ATGCGGACAGTAGGAACTACCGCTCTCTTGTGGTCTTGTCTTCAGGGTGT
GCACTCGTTCACGGTCCCTCCACAGGCATTGGGCAAGACACACAGGTCCC
TCTCTGCACCAAGCTCCACCCACGTCGCGCGGGTTGAACATGAAGATCGT
ACATGCCGTGCCAGCAGGAGCAGGGGCACCAGCAGCACATGCGTGAGGGC
GAAGGGAGGTGCGGGAGAGGAAGAGGCGGGGGAAGAACAACAAGATGTCA
TCGAGAAGTTTTTCAGCATGTTTTTCGGGAACAAGGACGATGCGCCGGGA
GGGGACCTGGATCGCATCACGGTCAAGAAGTTTCCGGACCAGTATCCCGC
AGAGAAAATTCTCCAGGCAGAGCCGGTGAAAGGGGACTCCAAAGACATGG
CCGTCATCCGGCCGCTGCTCAAGCAAACCGAGCTAGAATTCCGGAAGCTC
AAGCTGGTGTACGACTCGAAGCGAAACGGATGGAAGCCTGCAGCGTTCCA
CAAGGGGGTGGATTTCAAGGGCCCCGGGCTTGTGGTGGGCAAAACCAAGG
GAGGGGCCGTCGTTGGGGGGTACAACCCCAAAGGGTGGGTGGGGTACGGA
GAGTACAGACCGGGCTTGTCGGCGTTCTTATTCACGTGGCGGGACGGGGA
CACCTCCAAGAGAGCGATGAAGCTCAGAAAGATTGGGGGGGCGGGGCTCG
CTGTCTGGGACAAGCCGGAGTGTGGCCCTTTGTTCGGCTCGGATGGTTTC
GGGGTGGGGATGCAGAAGGGCTCGGAGCGAATGGGCAGGAGTAAGCTGGG
CAGCTACTACGAGAGGCTTCCTGCTGCCTACGGAGGAGCGAGCATCTTCG
CCCCGGGAGACAACGGCGGCATCGCGGAGATGGTGGATCTCAAGGCGTAC
GTTGGCGTTTACGAGAGGGGGGAGAGGATCCCCTTCGACGACGCGATTCC
TTTCTCTCTCAGCTGA
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