prot_E_fasciculatus_S2_contig715.15324.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig715.15324.1
Unique Nameprot_E_fasciculatus_S2_contig715.15324.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length248
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig715.15324.1 vs. uniprot
Match: D7G920_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G920_ECTSI)

HSP 1 Score: 410 bits (1053), Expect = 3.660e-143
Identity = 225/248 (90.73%), Postives = 228/248 (91.94%), Query Frame = 0 
Query:    1 VRDPPTAHTQPTHTTSRLAVTLHFSPSNIVLITRF-MSTPVPATGGAVGSKARRPLATTPGDKIVEGERLRDEAQSLLKGDEPKKAAVKFRTVFAYTKGLIPQTSELALYAAATGQQTVIDQKQQVAVRALELSCNEGLATIYFRSGHHEKALGYSEKVLLAEPESAKALFRAGQLNLRLKNIEAAKRCLTRAAKHEPQNVNIRTELRNLTKLAQGEGVEAGTDSATPEEGKESAGDKRKCPKQSEEA 247
            VR   +AHTQ T T  RL VTL FSPSNIVL TRF MSTPVPATGGA  S ARRPL TTPGDKIVEGERLRDEAQSLLK D+PK AAVKFRTVFAYTKGLIPQTSELALYAA TGQQTVIDQKQQVAVRALELSCNEGLATIYFRSGHHEKALGYSEKVLLAEPESAKALFRAGQLNLRLKNIEAAKRCLTRAAKHEPQNVNIRTELRNLTKLAQGEGVEAGT+SAT EEGKESAGDKRKCPK SEEA
Sbjct:   11 VRSKGSAHTQHTDTHLRLTVTLRFSPSNIVLATRFEMSTPVPATGGAAASNARRPLPTTPGDKIVEGERLRDEAQSLLKSDKPKTAAVKFRTVFAYTKGLIPQTSELALYAAVTGQQTVIDQKQQVAVRALELSCNEGLATIYFRSGHHEKALGYSEKVLLAEPESAKALFRAGQLNLRLKNIEAAKRCLTRAAKHEPQNVNIRTELRNLTKLAQGEGVEAGTESATTEEGKESAGDKRKCPKSSEEA 258
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig715.15324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G920_ECTSI3.660e-14390.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 132..165
e-value: 95.0
score: 6.4
coord: 166..199
e-value: 0.032
score: 23.4
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 166..199
score: 8.703
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 132..165
score: 7.198
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 55..217
e-value: 4.3E-20
score: 73.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 69..209
NoneNo IPR availablePFAMPF13371TPR_9coord: 139..201
e-value: 5.7E-9
score: 36.0
NoneNo IPR availablePANTHERPTHR46512FAMILY NOT NAMEDcoord: 56..216
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 132..199
score: 14.044

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig715contigE_fasciculatus_S2_contig715:1568..4508 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig715.15324.1mRNA_E_fasciculatus_S2_contig715.15324.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig715 1568..4508 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig715.15324.1 ID=prot_E_fasciculatus_S2_contig715.15324.1|Name=mRNA_E_fasciculatus_S2_contig715.15324.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=248bp
VRDPPTAHTQPTHTTSRLAVTLHFSPSNIVLITRFMSTPVPATGGAVGSK
ARRPLATTPGDKIVEGERLRDEAQSLLKGDEPKKAAVKFRTVFAYTKGLI
PQTSELALYAAATGQQTVIDQKQQVAVRALELSCNEGLATIYFRSGHHEK
ALGYSEKVLLAEPESAKALFRAGQLNLRLKNIEAAKRCLTRAAKHEPQNV
NIRTELRNLTKLAQGEGVEAGTDSATPEEGKESAGDKRKCPKQSEEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat