prot_E_fasciculatus_S2_contig7109.15286.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7109.15286.1
Unique Nameprot_E_fasciculatus_S2_contig7109.15286.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length231
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig7109.15286.1 vs. uniprot
Match: A0A6H5KUQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUQ6_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 7.550e-47
Identity = 155/220 (70.45%), Postives = 159/220 (72.27%), Query Frame = 0 
Query:   25 MSALTDIFTVKDKVSTKKNREEKDKDKGFKITSLFDAGLTAGAATAENPTPAGGDGV---GGTTTGLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDG------------GHADGESQPGGPLPISNGXXXXXXAVVAETALWRPLDEVVAVAARFMRTGKREDVETAWLGERRALTQDFKRKHKDAVKGRRGA 229
            MSALTDIFTVKDKVS+KKNREEKDKDKGFKITSLFDAGLTAG                   G      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              S              G A GESQPGG LP+S  XXXXXX VV ETALWRPLDEVVA+AARFMRTGKREDVE AW+GERRALTQDFKRKHKDAVKGRRGA
Sbjct:    1 MSALTDIFTVKDKVSSKKNREEKDKDKGFKITSLFDAGLTAGXXXXXXXXXXXXXXXXXXAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLVEGQARPAASLSSXXXXXXXXXXXXXGDAGGESQPGGTLPVSX-XXXXXXXVVVETALWRPLDEVVAIAARFMRTGKREDVEAAWIGERRALTQDFKRKHKDAVKGRRGA 219
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BLAST of mRNA_E_fasciculatus_S2_contig7109.15286.1 vs. uniprot
Match: D7FS94_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS94_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 1.840e-15
Identity = 42/49 (85.71%), Postives = 44/49 (89.80%), Query Frame = 0 
Query:  181 LDEVVAVAARFMRTGKREDVETAWLGERRALTQDFKRKHKDAVKGRRGA 229
            LD+ +A   RFMRTGKREDVE AWLGERRALTQDFKRKHKDAVKGRRGA
Sbjct:  429 LDDRLAELLRFMRTGKREDVEAAWLGERRALTQDFKRKHKDAVKGRRGA 477
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7109.15286.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KUQ6_9PHAE7.550e-4770.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS94_ECTSI1.840e-1585.71RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7109contigE_fasciculatus_S2_contig7109:3170..3862 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7109.15286.1mRNA_E_fasciculatus_S2_contig7109.15286.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7109 3170..3864 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7109.15286.1 ID=prot_E_fasciculatus_S2_contig7109.15286.1|Name=mRNA_E_fasciculatus_S2_contig7109.15286.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=231bp
ATGRGGGGVGHQDGGGGPERFVAHMSALTDIFTVKDKVSTKKNREEKDKD
KGFKITSLFDAGLTAGAATAENPTPAGGDGVGGTTTGLFSFGFGGERAGA
PAAAAAAGDGGTGAVPVEGQARSAASLSLATAATAAAAAASVSDGGHADG
ESQPGGPLPISNGGGGGGGAVVAETALWRPLDEVVAVAARFMRTGKREDV
ETAWLGERRALTQDFKRKHKDAVKGRRGATA
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