prot_E_fasciculatus_S2_contig7107.15284.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7107.15284.1
Unique Nameprot_E_fasciculatus_S2_contig7107.15284.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length655
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7107.15284.1 vs. uniprot
Match: D7FGW0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW0_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 2.790e-79
Identity = 349/589 (59.25%), Postives = 378/589 (64.18%), Query Frame = 0
Query:    1 MNNGTPXXXXXXXXXXXXXKRHPALAPSLPKSLITKKIPAPRPEDVARAKKAAVEDTKKEEVCTICLDALPDIGRGILACGHTFCFGCIHIWSQSK-ERALCPTCRVPFNKIKKTLTPKDMAKEKLRNERDKKRKNATKKQRDRMRRRRASVKQPCEKVFVKDVRVRKLSHKKRLAQAAREAHPQVSLFSTMGSAAAARQATFEA-------YAVQHQANLLATRARREAELRDQHQTQLTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEQGGTPLGGVSASYDSVNAAAATPXXXXXXXXXXXXXXXXXXXXXXXXXXGAAAPRGPRMRYTVAGFTNDSIIPRGRSFATAAEAAAFSAGHASYAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDHARLMREMDAVNAAAFTESFAYMTRETERLRAQQRTADRSRRLGEGEEXXXXXXXXXXXXXXXXXXXXXVSEVAXXXVAAAELPSSRMDLLARLAGLEEPMPARRTST-AVSLNSSAS 580
            MNNGTP             KRHPALAP LPKSLITKKIPAP PEDV R +KAA +D KK E+C ICL+ALPDI RGI+ACGHTFCFGCIH W+ ++ + ALCP+CR PFNKIKKTL+PKD+ KEKLRNERD                R A VKQP +K+FVKDVRVRK+S KK+  + AR  HP+ +     GS  A +QA   A                                      XXXXXXXXXXXXXXXXXXXXXXXXXXXX    RAEQ G   G VS  +DSV AAAA P XXXXXXXXXXXXXXXXXXXXXXXX GAAA RGPRMRYTVAGF N+SI+ RGRSFA+AAEAAAFSA  ASYAA                            XXXXXXXXXXXXXXXXXXXXXXXX                  XXXXXXXXXXXXXXX               L R M AVNAAA   + A +T E ERLRAQ+R ADRSRRLGE EEXXXXXXXXXXXXXXXXXXXXX     XX    AE+PS RMDLLARLAGLEE MPARR +  A SLNSSAS
Sbjct:    1 MNNGTPPGDAPNNN-----KRHPALAPFLPKSLITKKIPAPHPEDVERTRKAAADDAKKGELCIICLEALPDIERGIIACGHTFCFGCIHDWASNRGDSALCPSCRFPFNKIKKTLSPKDIEKEKLRNERDXXXXXXXXXXXXXXXXRAARVKQPVDKIFVKDVRVRKMSKKKQAIEEARTVHPEAA----GGSMNAGQQAMLRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVKARAEQRGASPGVVSEWWDSVAAAAAAPAXXXXXXXXXXXXXXXXXXXXXXXXSGAAATRGPRMRYTVAGFANNSIMGRGRSFASAAEAAAFSASRASYAAAAEPVRFSNSSILPISTPRGLAIATATAXXXXXXXXXXXXXXXXXXXXXXXXRLRAQRRATERSGRLGEEXXXXXXXXXXXXXXXLS-------------LERTMAAVNAAAARRALASITLEAERLRAQRRAADRSRRLGEVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXX----AEVPS-RMDLLARLAGLEERMPARRAAPGAASLNSSAS 562          
BLAST of mRNA_E_fasciculatus_S2_contig7107.15284.1 vs. uniprot
Match: A0A6H5L829_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L829_9PHAE)

HSP 1 Score: 219 bits (557), Expect = 9.170e-60
Identity = 320/661 (48.41%), Postives = 354/661 (53.56%), Query Frame = 0
Query:    1 MNNGTPXXXXXXXXXXXXXKRHPALAPSLPKSLITKKIPAPRPEDVARAKKAAVEDTKKEEVCTICLDALPDIGRGILACGHTFCFGCIHIWS-QSKERALCPTCRVPFNKIKKTLTPKDMAKEKLRNERDKKRKNATKKQRDRMRRRRASVKQPCEKVFVKDVRVRKLSHKKRLAQAAREAHPQV---SLFSTMGSAAAARQATFEAYAVQHQANLLATRARREAELRDQHQTQLTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEQGGTPLGGVSASYDSVNAAAATPXXXXXXXXXXXXXXXXXXXXXXXXXXGAAAPR--GPRMRYTVAGFTNDSIIP----RGRSFATAAEAAAFSAGHASYAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDHARLMREMDAVNAAAFTESFAYMTRETERLRAQQRTADRSRRLGEGEEXXXXXXXXXXXXXXXXXXXXXVSEVAXXXVAAAELPSSRMDLLARLAGLEEPMPARRTSTAVSLNSSASPPPSISATARVTRSVTRNTRWSSASSXXXXXXXXEVVAAAAIPTRVSPRRTRTMSVALERWVASGQGGGGG 651
            MNNGTP             KRHPALAP LPKSLITKKIPAP PEDV R KKAA +D KK E+C IC +ALPDI RGI+ACGHTFCFGCIH WS +S +  LCP+CRVPFNKIKKTL+PKD+ KEKLRNE DK                          +FVKD+RVRK+S KK+  + AR  HP     S+ +   +   ARQ   E                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXX   RAEQ G   G VS  +DSV AAAATP XXX                       AA P    P     V  F+N SI+P    RG + A                                                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXX      L R M AV+A A     A +T+  ERLRAQ+R ADRSRRL E E+        XXXXXXXXXXXXX     XXX     +PS RMDLLARLAGLEEPMPARR + A S +      PSISATA VTRS TRNTR   +  XXXXXXX EVV  A  PT VSPRR   +S A+  W+A+  GG GG
Sbjct:    1 MNNGTPPGDAPTNN-----KRHPALAPVLPKSLITKKIPAPHPEDVERTKKAAADDAKKGELCIICQEALPDIERGIIACGHTFCFGCIHTWSSRSGDSVLCPSCRVPFNKIKKTLSPKDVEKEKLRNEVDK--------------------------IFVKDIRVRKMSKKKKAIEEARTLHPDAAGGSMNAGQQAMLRARQLAIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTRAEQRGASPGVVSDWWDSVAAAAATPAXXXAVR--------------------AATPAVATPAADEPVR-FSNSSILPISTPRGLAIAX------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTARSGRLGEEEXXXXXXXXXXXXXELSLERTMAAVHATAARRELASITQVAERLRAQRRAADRSRRLEEVEKEERSLQREXXXXXXXXXXXXXXXXXXXXXXXXXAVPS-RMDLLARLAGLEEPMPARRAADATSAS------PSISATAGVTRSATRNTR---SXXXXXXXXXTEVVTVA--PTWVSPRRR--LSEAVATWLANAGGGDGG 535          
BLAST of mRNA_E_fasciculatus_S2_contig7107.15284.1 vs. uniprot
Match: A0A6H5K2A7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A7_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 9.830e-15
Identity = 48/124 (38.71%), Postives = 66/124 (53.23%), Query Frame = 0
Query:   20 KRHPALAPSLPKSLITKKIPAPRPEDVARAKKAAVEDTKKE-------------------EVCTICLDALPDIGRGILACGHTFCFGCIHIWSQSKERALCPTCRVPFNKIKKTLTPKDMAKEK 124
            K  P LAP+  +S +T+  P P  E +AR +  + E+  +                     +C IC D LPD+ RG+L+CGH FCF CIH W+  K  ++CP CRV   +I KTL+P D AK K
Sbjct:   19 KNQPTLAPTPDQSEVTRTAPLPE-ELIARTEGVSKEEEARRVERAXXXXXXXXXXXXXXXXMCAICCDKLPDLERGVLSCGHVFCFACIHQWT--KNSSICPGCRVQIKRITKTLSPADEAKSK 139          
BLAST of mRNA_E_fasciculatus_S2_contig7107.15284.1 vs. uniprot
Match: D7FGV7_ECTSI (Similar to PHD finger family protein, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV7_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 2.480e-14
Identity = 69/191 (36.13%), Postives = 92/191 (48.17%), Query Frame = 0
Query:   20 KRHPALAPSLPKSLITKKIPAPRPEDVARAKKAAVEDTKKEE--------------------VCTICLDALPDIGRGILACGHTFCFGCIHIWSQSKERALCPTCRVPFNKIKKTLTPKDMAKEK------LRNERDKKRKNATKKQRDRMRRRRASVKQPCEKVFVKDVRVRKLSHKKRLAQAAREAHPQ 184
            K  P LAP+  +S +T+  P P  E +AR +  + E                          +C IC D LP++ RG+L+CGH FCF CIH W+  K  ++CP CRV   +I KTL+P D AK K      + ++R  K+K   +KQ  R R R +  K P      K VRVR  S K   AQ     HPQ
Sbjct:  114 KNQPTLAPTPDQSEVTRTAPLPE-ELIARTEGVSKEXXXXXXXXXXXXXXXXXXXXXXXXXXMCAICCDKLPNLERGVLSCGHVFCFACIHQWT--KNSSICPGCRVQIKRITKTLSPADEAKAKGETRKPVVSQRGMKKK--PRKQLKRARHRDSRAKNPASGFVTKTVRVRPKSLKMTPAQQRAAPHPQ 299          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7107.15284.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FGW0_ECTSI2.790e-7959.25RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L829_9PHAE9.170e-6048.41RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K2A7_9PHAE9.830e-1538.71RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FGV7_ECTSI2.480e-1436.13Similar to PHD finger family protein, partial n=1 ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 506..530
NoneNo IPR availableCOILSCoilCoilcoord: 122..147
NoneNo IPR availablePANTHERPTHR15067:SF4E3 UBIQUITIN-PROTEIN LIGASE RNF8coord: 51..427
NoneNo IPR availablePANTHERPTHR15067FAMILY NOT NAMEDcoord: 51..427
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 57..112
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 63..104
e-value: 1.1E-6
score: 38.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 63..105
e-value: 4.4E-8
score: 33.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 63..105
score: 13.168
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 46..186
e-value: 9.4E-15
score: 56.3
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 80..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7107contigE_fasciculatus_S2_contig7107:57..5020 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7107.15284.1mRNA_E_fasciculatus_S2_contig7107.15284.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7107 57..5020 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7107.15284.1 ID=prot_E_fasciculatus_S2_contig7107.15284.1|Name=mRNA_E_fasciculatus_S2_contig7107.15284.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=655bp
MNNGTPPGGAPNNNNNNNNKRHPALAPSLPKSLITKKIPAPRPEDVARAK
KAAVEDTKKEEVCTICLDALPDIGRGILACGHTFCFGCIHIWSQSKERAL
CPTCRVPFNKIKKTLTPKDMAKEKLRNERDKKRKNATKKQRDRMRRRRAS
VKQPCEKVFVKDVRVRKLSHKKRLAQAAREAHPQVSLFSTMGSAAAARQA
TFEAYAVQHQANLLATRARREAELRDQHQTQLTAAREVQQAAARALAEAQ
ARQAAGTRARQVAAAEARAEQGGTPLGGVSASYDSVNAAAATPAAAAPAA
AAPTAAAAPAAAAAAATPSGAAAPRGPRMRYTVAGFTNDSIIPRGRSFAT
AAEAAAFSAGHASYAAAAAAAAAAAPEPASSNSSMTPTNRPRTFATAAAG
AANAAAAARAEARSAAAAAAAAAAAATTASEQLRARMRADDRSRRLGGDE
EEERSRQRERQQDHARLMREMDAVNAAAFTESFAYMTRETERLRAQQRTA
DRSRRLGEGEEEEERSQQRERQQEEEARRRDGVSEVAAAAVAAAELPSSR
MDLLARLAGLEEPMPARRTSTAVSLNSSASPPPSISATARVTRSVTRNTR
WSSASSAPASATATEVVAAAAIPTRVSPRRTRTMSVALERWVASGQGGGG
GPSA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017907Znf_RING_CS
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING