mRNA_E_fasciculatus_S2_contig7.15136.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7.15136.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA0_ECTSI) HSP 1 Score: 1530 bits (3962), Expect = 0.000e+0 Identity = 822/861 (95.47%), Postives = 833/861 (96.75%), Query Frame = 1
Query: 193 MGGVQPIDENDDGLIAEASLFDAAGGGSEGDLGGVAPGDEDLAMAWSGSRLVRSASMSSTGSADAEESEEWLTSLVEKSKAAGAKGARSKGPKGGKWTKEEDTRLRDIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQLTPDLLNKLKEAYEQMQVQPASGSQGMSDESGTDNDSKEPSTRAAAAQHHRRHDSTPSAFGDVNLLHAGGEQLTSPPHPMHARRHSAAGALSGMLSESPESERRFRRRMGQEDVEARSAQAQGAVRARAGASERGGRESEKHTSSLAVVNELQTVKTEELEQSATTKERSEKQDHSHLLAPHGSAEAPPGGRGQSHMLHRMSPPQHPHSRLPGHPPRPFTGPSRSTGAGPGGAGVGDGGMGALLGVASQLRPPRIDTNSSVKRESGGGPASLSQLLLTSPFGSNDGARFAATNDAIGQPNTHTAELETSNAAAGESYSSATAESPVSQAVRETRRQGTRMQEGEQVPLSVLPYFRFLSEEAQRNVMSQLIDNFQTTSIGKRGVASTSSTSAATSSASSPGGLAFMRSPFAKGLAPVGSGGATASAGNGSSSPPFEVDAMMVDHHRVGGTTGASISAAVAAVEAHASSDHEMNRVLPAPSLSTAANSEAAMEQSRLPPLRQDPSDGRNSGAFGRVNGSSMGKNGSSLDIAGPNPPAAPASTGRDPTTRSPRSHMRHASESALPSAAMAXXXXXAMQTEPMDDGGRRSDWNQRMGRHRPPSR 2775
MGG QP DENDDGLIAEA+LFDAAGGGSEGDL GVAP DEDLAMAWSGSRLVRS SMSSTGSADAEESEEWLTSLVEKSKAAGAKGARSKGPKGGKWTKEEDTRLR+IVEHHGARNWRMVAEQLGTLRSDVQCLHR WNKVLRPGLHKGPWTEEEDSIVRECVE SGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQLTPDLLNKLKEAYEQMQVQPASGSQGMSDESGTDND+KEPSTRAAA HDSTPSAFGD +LLH GGEQLTSPP PMHARRHSAAGAL+GMLS+SPESERRFRRRMGQEDVEARSAQAQGAVRARAGASER GRESEKHTSSLAVVNELQTVKTEELEQ ATTKERSEKQDHSHLLAPHGSAEAP GGRGQSHMLHRMSPPQHPHSRLPGHPPRPF GPSRSTGAGPGGAGVGDGGMGALLGVASQLRPPRIDTNS+VKRESGGGPASLSQLLLTSPFGSNDGARFAATNDAIGQPNTHTAE+ETS A AGESYSSATAESPVSQAVRETRRQGTRMQEGEQVPLSVLPYFRFLSEEAQRNVMSQLIDNFQTTSIGKRGVASTSS SAATSSASSPGGLAFMRSPFAKGLAPVGSGGATASAGNGSSSP FEVDAMMVDHHRVGGT GASISAAVAAVEAHASSDH+MNRVLPAP +STAANSEAAMEQSRLPPLRQDPSDGRNSG FGRVNGSSMGKNGSSLD+AGPNPPA PASTGRDPTTRSPRSHMRHASESALPSAAMAXXXXXAMQTEPMDDGGRRSDWNQRMGRHRPPSR
Sbjct: 1 MGGAQPTDENDDGLIAEANLFDAAGGGSEGDLVGVAPADEDLAMAWSGSRLVRSTSMSSTGSADAEESEEWLTSLVEKSKAAGAKGARSKGPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTLRSDVQCLHR-WNKVLRPGLHKGPWTEEEDSIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQLTPDLLNKLKEAYEQMQVQPASGSQGMSDESGTDNDTKEPSTRAAAXXXXXXHDSTPSAFGDDDLLHPGGEQLTSPPQPMHARRHSAAGALTGMLSDSPESERRFRRRMGQEDVEARSAQAQGAVRARAGASERAGRESEKHTSSLAVVNELQTVKTEELEQPATTKERSEKQDHSHLLAPHGSAEAPAGGRGQSHMLHRMSPPQHPHSRLPGHPPRPFAGPSRSTGAGPGGAGVGDGGMGALLGVASQLRPPRIDTNSTVKRESGGGPASLSQLLLTSPFGSNDGARFAATNDAIGQPNTHTAEMETSTAPAGESYSSATAESPVSQAVRETRRQGTRMQEGEQVPLSVLPYFRFLSEEAQRNVMSQLIDNFQTTSIGKRGVASTSSASAATSSASSPGGLAFMRSPFAKGLAPVGSGGATASAGNGSSSPAFEVDAMMVDHHRVGGT-GASISAAVAAVEAHASSDHDMNRVLPAPGVSTAANSEAAMEQSRLPPLRQDPSDGRNSGGFGRVNGSSMGKNGSSLDLAGPNPPAVPASTGRDPTTRSPRSHMRHASESALPSAAMAXXXXXAMQTEPMDDGGRRSDWNQRMGRHRPPSR 859
BLAST of mRNA_E_fasciculatus_S2_contig7.15136.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQG7_9STRA) HSP 1 Score: 272 bits (695), Expect = 1.960e-82 Identity = 128/165 (77.58%), Postives = 140/165 (84.85%), Query Frame = 1
Query: 454 RSKGPKGGKWTKEEDTRLRDIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWL 948
R GP GGKWTKEED LR IVE HGA+NWR VAE LG R+DVQCLHR WNKVLRPGLHKGPWTEEED IVR+ V + GA KVKWS +A++L GRIGKQCRERWFNHLDP+I KGEW+PEEDRIVF AQ GNRW +IAKLLPGRTEN+VKNR+NSSARKKWL
Sbjct: 1 RKLGP-GGKWTKEEDASLRVIVEQHGAKNWRKVAELLGDTRTDVQCLHR-WNKVLRPGLHKGPWTEEEDGIVRDMVLMYGAGKVKWSAIAAKLHGRIGKQCRERWFNHLDPNINKGEWTPEEDRIVFEAQNQFGNRWSDIAKLLPGRTENSVKNRWNSSARKKWL 163
BLAST of mRNA_E_fasciculatus_S2_contig7.15136.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R561_9STRA) HSP 1 Score: 276 bits (706), Expect = 9.650e-78 Identity = 123/164 (75.00%), Postives = 142/164 (86.59%), Query Frame = 1
Query: 466 PKGGKWTKEEDTRLRDIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQN 957
P GGKW++EED +LR IVE HGA+NW+ VAE LG +RSDVQCLHR WNKVLRPGLHKGPWTE+ED IV + V G +KWSV+A+ LPGRIGKQCRERWFNHLDPSIKKGEW+PEED+++F AQ +GNRWCEIAKLLPGRTENAVKNR+NSSARK+WL +N
Sbjct: 144 PIGGKWSREEDDKLRAIVEQHGAKNWKKVAELLGPVRSDVQCLHR-WNKVLRPGLHKGPWTEDEDRIVSDMVLAHGVGNIKWSVIAAELPGRIGKQCRERWFNHLDPSIKKGEWTPEEDKVLFEAQLVVGNRWCEIAKLLPGRTENAVKNRWNSSARKRWLQEN 306
BLAST of mRNA_E_fasciculatus_S2_contig7.15136.1 vs.
Match: Homeodomain-like (protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C844_9STRA) HSP 1 Score: 256 bits (653), Expect = 1.670e-76 Identity = 114/156 (73.08%), Postives = 130/156 (83.33%), Query Frame = 1
Query: 475 GKWTKEEDTRLRDIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKK 942
G W +ED RLRD V+ HG R+WR +AE +G R+D+QCLHR WNKVLRPGLHKGPWTE ED +VRE VE G KVKWS VA++LPGRIGKQCRERWFNHLDP+IK+ W+PEED +VF AQ +GNRWCEIAKLLPGRTENAVKNRFNSSA+KK
Sbjct: 2 GTWAPDEDARLRDAVDRHGPRSWRAIAEDVGGARTDMQCLHR-WNKVLRPGLHKGPWTETEDRVVRESVEAVGIAKVKWSAVAAKLPGRIGKQCRERWFNHLDPAIKRSPWTPEEDTVVFEAQLRLGNRWCEIAKLLPGRTENAVKNRFNSSAQKK 156
BLAST of mRNA_E_fasciculatus_S2_contig7.15136.1 vs.
Match: Homeodomain-like (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN0_9STRA) HSP 1 Score: 259 bits (661), Expect = 1.200e-75 Identity = 118/192 (61.46%), Postives = 146/192 (76.04%), Query Frame = 1
Query: 481 WTKEEDTRLRDIVEHHGARNWRMVAEQLGTL-------RSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQ-LTPDLLNKLKEAYEQMQVQ 1032
WT EED RLR +V+ HG+RNW++VA++L R+DVQCL+R W K LRPGLHKG WTE ED +VRE VE G KVKWS +A+RLPGRIGKQCRERWFNHLDP++K+ W+PEED ++F AQA +GNRWCEIAKLLPGRTENAVKNRFNSSA+KKW+ +N + +T LL+ ++ YE Q +
Sbjct: 36 WTSEEDARLRAVVDKHGSRNWKLVADELAQAQPHAQPPRTDVQCLNR-WKKTLRPGLHKGAWTEAEDRVVRESVEECGIAKVKWSTIAARLPGRIGKQCRERWFNHLDPALKRSTWTPEEDTVIFEAQARLGNRWCEIAKLLPGRTENAVKNRFNSSAQKKWVSKNGAATGEGITQQLLDAVQRVYEAEQAE 226
BLAST of mRNA_E_fasciculatus_S2_contig7.15136.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9B4_AURAN) HSP 1 Score: 246 bits (628), Expect = 5.910e-73 Identity = 112/155 (72.26%), Postives = 130/155 (83.87%), Query Frame = 1
Query: 478 KWTKEEDTRLRDIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKK 942
KWT+EED RLR+IVE GA+NW+ +A LG +RSDVQCLHR WNKVLRPGL KGPWT +ED IV++ V GA +KWSV+A++LPGRIGKQCRERWFNHLDP IKKG+W+PEED I+F Q GNRW EIAKLLPGRTENAVKNR+NSSARK+
Sbjct: 1 KWTEEEDNRLREIVETFGAKNWKRLAMLLGNVRSDVQCLHR-WNKVLRPGLSKGPWTADEDKIVKDMVLRHGAGNIKWSVIAAQLPGRIGKQCRERWFNHLDPEIKKGDWTPEEDNILFETQRVHGNRWSEIAKLLPGRTENAVKNRWNSSARKR 154
BLAST of mRNA_E_fasciculatus_S2_contig7.15136.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GEG8_9STRA) HSP 1 Score: 246 bits (628), Expect = 3.390e-72 Identity = 113/182 (62.09%), Postives = 138/182 (75.82%), Query Frame = 1
Query: 472 GGKWTKEEDTRLRDIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQ--LTPDLLNKLKEA 1011
GG WT ED LR VE HG RNW+ +AE LG R+DVQCLHR WNKVL+PGL KGPW +EED +VR+ V G +V+WSV+AS+LPGRIGKQCRERWFNHLDP+IKKG W EED ++F AQ +GN+WCEIA++LPGRTENAVKNR+NSSAR++W + Q P L+ ++KEA
Sbjct: 11 GGNWTAAEDAELRVAVEAHGGRNWKRIAETLGHGRTDVQCLHR-WNKVLKPGLVKGPWLKEEDDVVRDMVMKYGVGQVRWSVIASKLPGRIGKQCRERWFNHLDPAIKKGGWMEEEDLLIFQAQREVGNKWCEIARMLPGRTENAVKNRWNSSARRRWFKETGSKMEQDARVPMLVEEIKEA 191
BLAST of mRNA_E_fasciculatus_S2_contig7.15136.1 vs.
Match: Hypothetical (protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X3E5_9STRA) HSP 1 Score: 257 bits (657), Expect = 9.230e-72 Identity = 116/163 (71.17%), Postives = 136/163 (83.44%), Query Frame = 1
Query: 460 KGPKGGKWTKEEDTRLRDIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWL 948
+ P GGKWT+EED RLR+IVE GA+NW+ +A LGT+RSDVQCLHR WNKVLRPGL KGPWT ED +VR+ V GA +KWSV+A++LPGRIGKQCRERWFNHLDP IKKG+W+P+ED ++F Q GNRW EIAKLLPGRTENAVKNR+NSSARK+WL
Sbjct: 91 RAPVGGKWTEEEDRRLREIVETFGAKNWKRLAMLLGTVRSDVQCLHR-WNKVLRPGLSKGPWTAAEDRVVRDMVLRHGAGNIKWSVIAAQLPGRIGKQCRERWFNHLDPDIKKGDWTPDEDAVLFETQRVHGNRWSEIAKLLPGRTENAVKNRWNSSARKRWL 252
BLAST of mRNA_E_fasciculatus_S2_contig7.15136.1 vs.
Match: Hypothetical (protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HUA2_9STRA) HSP 1 Score: 254 bits (649), Expect = 7.180e-70 Identity = 134/227 (59.03%), Postives = 152/227 (66.96%), Query Frame = 1
Query: 445 KGARSKGPK---GGKWTKEEDTRLRDIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWL-DQNPGGASQ--------------LTPDLLNKLKEAYEQMQVQPASGSQGMSDESG 1071
KG R K K GGKW+KEED RL+ IV+ HGA+NW+ +AE LG RSDVQCLHR WNKVL+PGLHKGPW ED +VR+ V G KVKWS +A+ LPGRIGKQCRERWFNHLDPSI K W+ EED I+F AQ GNRWCEIAKLLPGRTEN VKNR+NSSARKKW D+ G + L PDL +K A Q GSQG +SG
Sbjct: 229 KGVRLKPRKPSQGGKWSKEEDARLKGIVQEHGAKNWKKIAELLGHTRSDVQCLHR-WNKVLKPGLHKGPWQAAEDEVVRDMVIRHGVGKVKWSDIAALLPGRIGKQCRERWFNHLDPSISKAPWTEEEDTIIFEAQQIFGNRWCEIAKLLPGRTENMVKNRWNSSARKKWFADRKAEGGNLAKMLATRSDANLTGLPPDLAAAVKAAR---QTATNGGSQGDQKKSG 451
BLAST of mRNA_E_fasciculatus_S2_contig7.15136.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPT5_9STRA) HSP 1 Score: 242 bits (617), Expect = 1.710e-67 Identity = 107/161 (66.46%), Postives = 131/161 (81.37%), Query Frame = 1
Query: 472 GGKWTKEEDTRLRDIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQ 954
GGKW+ EEDT L++IV+ HGA++W+ VA LG R+DVQCLHR WNKVLRPGL KG W++EED IVR V G KV+WS +A +LPGRIGKQCRERWFNHLDP+IKKG+W+ +E+ I++ AQ + GNRWCEI+KLLPGRTENAVKNR+NS KKWL +
Sbjct: 72 GGKWSTEEDTLLKEIVQVHGAKSWKKVAGLLGKTRTDVQCLHR-WNKVLRPGLQKGAWSKEEDQIVRNMVAQVGVVKVRWSTIAEQLPGRIGKQCRERWFNHLDPTIKKGDWTRDEEIIIYEAQRHFGNRWCEISKLLPGRTENAVKNRWNSCTMKKWLKE 231 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7.15136.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7.15136.1 >prot_E_fasciculatus_S2_contig7.15136.1 ID=prot_E_fasciculatus_S2_contig7.15136.1|Name=mRNA_E_fasciculatus_S2_contig7.15136.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=643bp MGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQLTPDLLNKback to top mRNA from alignment at E_fasciculatus_S2_contig7:2355..11918+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7.15136.1 ID=mRNA_E_fasciculatus_S2_contig7.15136.1|Name=mRNA_E_fasciculatus_S2_contig7.15136.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=9564bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7:2355..11918+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7:2355..11918+ >mRNA_E_fasciculatus_S2_contig7.15136.1 ID=mRNA_E_fasciculatus_S2_contig7.15136.1|Name=mRNA_E_fasciculatus_S2_contig7.15136.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1929bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7:2355..11918+ (Ectocarpus fasciculatus EfasUO2)back to top |