mRNA_E_fasciculatus_S2_contig7.15136.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7.15136.1
Unique NamemRNA_E_fasciculatus_S2_contig7.15136.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7.15136.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA0_ECTSI)

HSP 1 Score: 1530 bits (3962), Expect = 0.000e+0
Identity = 822/861 (95.47%), Postives = 833/861 (96.75%), Query Frame = 1
Query:  193 MGGVQPIDENDDGLIAEASLFDAAGGGSEGDLGGVAPGDEDLAMAWSGSRLVRSASMSSTGSADAEESEEWLTSLVEKSKAAGAKGARSKGPKGGKWTKEEDTRLRDIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQLTPDLLNKLKEAYEQMQVQPASGSQGMSDESGTDNDSKEPSTRAAAAQHHRRHDSTPSAFGDVNLLHAGGEQLTSPPHPMHARRHSAAGALSGMLSESPESERRFRRRMGQEDVEARSAQAQGAVRARAGASERGGRESEKHTSSLAVVNELQTVKTEELEQSATTKERSEKQDHSHLLAPHGSAEAPPGGRGQSHMLHRMSPPQHPHSRLPGHPPRPFTGPSRSTGAGPGGAGVGDGGMGALLGVASQLRPPRIDTNSSVKRESGGGPASLSQLLLTSPFGSNDGARFAATNDAIGQPNTHTAELETSNAAAGESYSSATAESPVSQAVRETRRQGTRMQEGEQVPLSVLPYFRFLSEEAQRNVMSQLIDNFQTTSIGKRGVASTSSTSAATSSASSPGGLAFMRSPFAKGLAPVGSGGATASAGNGSSSPPFEVDAMMVDHHRVGGTTGASISAAVAAVEAHASSDHEMNRVLPAPSLSTAANSEAAMEQSRLPPLRQDPSDGRNSGAFGRVNGSSMGKNGSSLDIAGPNPPAAPASTGRDPTTRSPRSHMRHASESALPSAAMAXXXXXAMQTEPMDDGGRRSDWNQRMGRHRPPSR 2775
            MGG QP DENDDGLIAEA+LFDAAGGGSEGDL GVAP DEDLAMAWSGSRLVRS SMSSTGSADAEESEEWLTSLVEKSKAAGAKGARSKGPKGGKWTKEEDTRLR+IVEHHGARNWRMVAEQLGTLRSDVQCLHR WNKVLRPGLHKGPWTEEEDSIVRECVE SGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQLTPDLLNKLKEAYEQMQVQPASGSQGMSDESGTDND+KEPSTRAAA      HDSTPSAFGD +LLH GGEQLTSPP PMHARRHSAAGAL+GMLS+SPESERRFRRRMGQEDVEARSAQAQGAVRARAGASER GRESEKHTSSLAVVNELQTVKTEELEQ ATTKERSEKQDHSHLLAPHGSAEAP GGRGQSHMLHRMSPPQHPHSRLPGHPPRPF GPSRSTGAGPGGAGVGDGGMGALLGVASQLRPPRIDTNS+VKRESGGGPASLSQLLLTSPFGSNDGARFAATNDAIGQPNTHTAE+ETS A AGESYSSATAESPVSQAVRETRRQGTRMQEGEQVPLSVLPYFRFLSEEAQRNVMSQLIDNFQTTSIGKRGVASTSS SAATSSASSPGGLAFMRSPFAKGLAPVGSGGATASAGNGSSSP FEVDAMMVDHHRVGGT GASISAAVAAVEAHASSDH+MNRVLPAP +STAANSEAAMEQSRLPPLRQDPSDGRNSG FGRVNGSSMGKNGSSLD+AGPNPPA PASTGRDPTTRSPRSHMRHASESALPSAAMAXXXXXAMQTEPMDDGGRRSDWNQRMGRHRPPSR
Sbjct:    1 MGGAQPTDENDDGLIAEANLFDAAGGGSEGDLVGVAPADEDLAMAWSGSRLVRSTSMSSTGSADAEESEEWLTSLVEKSKAAGAKGARSKGPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTLRSDVQCLHR-WNKVLRPGLHKGPWTEEEDSIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQLTPDLLNKLKEAYEQMQVQPASGSQGMSDESGTDNDTKEPSTRAAAXXXXXXHDSTPSAFGDDDLLHPGGEQLTSPPQPMHARRHSAAGALTGMLSDSPESERRFRRRMGQEDVEARSAQAQGAVRARAGASERAGRESEKHTSSLAVVNELQTVKTEELEQPATTKERSEKQDHSHLLAPHGSAEAPAGGRGQSHMLHRMSPPQHPHSRLPGHPPRPFAGPSRSTGAGPGGAGVGDGGMGALLGVASQLRPPRIDTNSTVKRESGGGPASLSQLLLTSPFGSNDGARFAATNDAIGQPNTHTAEMETSTAPAGESYSSATAESPVSQAVRETRRQGTRMQEGEQVPLSVLPYFRFLSEEAQRNVMSQLIDNFQTTSIGKRGVASTSSASAATSSASSPGGLAFMRSPFAKGLAPVGSGGATASAGNGSSSPAFEVDAMMVDHHRVGGT-GASISAAVAAVEAHASSDHDMNRVLPAPGVSTAANSEAAMEQSRLPPLRQDPSDGRNSGGFGRVNGSSMGKNGSSLDLAGPNPPAVPASTGRDPTTRSPRSHMRHASESALPSAAMAXXXXXAMQTEPMDDGGRRSDWNQRMGRHRPPSR 859          
BLAST of mRNA_E_fasciculatus_S2_contig7.15136.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQG7_9STRA)

HSP 1 Score: 272 bits (695), Expect = 1.960e-82
Identity = 128/165 (77.58%), Postives = 140/165 (84.85%), Query Frame = 1
Query:  454 RSKGPKGGKWTKEEDTRLRDIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWL 948
            R  GP GGKWTKEED  LR IVE HGA+NWR VAE LG  R+DVQCLHR WNKVLRPGLHKGPWTEEED IVR+ V + GA KVKWS +A++L GRIGKQCRERWFNHLDP+I KGEW+PEEDRIVF AQ   GNRW +IAKLLPGRTEN+VKNR+NSSARKKWL
Sbjct:    1 RKLGP-GGKWTKEEDASLRVIVEQHGAKNWRKVAELLGDTRTDVQCLHR-WNKVLRPGLHKGPWTEEEDGIVRDMVLMYGAGKVKWSAIAAKLHGRIGKQCRERWFNHLDPNINKGEWTPEEDRIVFEAQNQFGNRWSDIAKLLPGRTENSVKNRWNSSARKKWL 163          
BLAST of mRNA_E_fasciculatus_S2_contig7.15136.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R561_9STRA)

HSP 1 Score: 276 bits (706), Expect = 9.650e-78
Identity = 123/164 (75.00%), Postives = 142/164 (86.59%), Query Frame = 1
Query:  466 PKGGKWTKEEDTRLRDIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQN 957
            P GGKW++EED +LR IVE HGA+NW+ VAE LG +RSDVQCLHR WNKVLRPGLHKGPWTE+ED IV + V   G   +KWSV+A+ LPGRIGKQCRERWFNHLDPSIKKGEW+PEED+++F AQ  +GNRWCEIAKLLPGRTENAVKNR+NSSARK+WL +N
Sbjct:  144 PIGGKWSREEDDKLRAIVEQHGAKNWKKVAELLGPVRSDVQCLHR-WNKVLRPGLHKGPWTEDEDRIVSDMVLAHGVGNIKWSVIAAELPGRIGKQCRERWFNHLDPSIKKGEWTPEEDKVLFEAQLVVGNRWCEIAKLLPGRTENAVKNRWNSSARKRWLQEN 306          
BLAST of mRNA_E_fasciculatus_S2_contig7.15136.1 vs.
Match: Homeodomain-like (protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C844_9STRA)

HSP 1 Score: 256 bits (653), Expect = 1.670e-76
Identity = 114/156 (73.08%), Postives = 130/156 (83.33%), Query Frame = 1
Query:  475 GKWTKEEDTRLRDIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKK 942
            G W  +ED RLRD V+ HG R+WR +AE +G  R+D+QCLHR WNKVLRPGLHKGPWTE ED +VRE VE  G  KVKWS VA++LPGRIGKQCRERWFNHLDP+IK+  W+PEED +VF AQ  +GNRWCEIAKLLPGRTENAVKNRFNSSA+KK
Sbjct:    2 GTWAPDEDARLRDAVDRHGPRSWRAIAEDVGGARTDMQCLHR-WNKVLRPGLHKGPWTETEDRVVRESVEAVGIAKVKWSAVAAKLPGRIGKQCRERWFNHLDPAIKRSPWTPEEDTVVFEAQLRLGNRWCEIAKLLPGRTENAVKNRFNSSAQKK 156          
BLAST of mRNA_E_fasciculatus_S2_contig7.15136.1 vs.
Match: Homeodomain-like (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN0_9STRA)

HSP 1 Score: 259 bits (661), Expect = 1.200e-75
Identity = 118/192 (61.46%), Postives = 146/192 (76.04%), Query Frame = 1
Query:  481 WTKEEDTRLRDIVEHHGARNWRMVAEQLGTL-------RSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQ-LTPDLLNKLKEAYEQMQVQ 1032
            WT EED RLR +V+ HG+RNW++VA++L          R+DVQCL+R W K LRPGLHKG WTE ED +VRE VE  G  KVKWS +A+RLPGRIGKQCRERWFNHLDP++K+  W+PEED ++F AQA +GNRWCEIAKLLPGRTENAVKNRFNSSA+KKW+ +N     + +T  LL+ ++  YE  Q +
Sbjct:   36 WTSEEDARLRAVVDKHGSRNWKLVADELAQAQPHAQPPRTDVQCLNR-WKKTLRPGLHKGAWTEAEDRVVRESVEECGIAKVKWSTIAARLPGRIGKQCRERWFNHLDPALKRSTWTPEEDTVIFEAQARLGNRWCEIAKLLPGRTENAVKNRFNSSAQKKWVSKNGAATGEGITQQLLDAVQRVYEAEQAE 226          
BLAST of mRNA_E_fasciculatus_S2_contig7.15136.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9B4_AURAN)

HSP 1 Score: 246 bits (628), Expect = 5.910e-73
Identity = 112/155 (72.26%), Postives = 130/155 (83.87%), Query Frame = 1
Query:  478 KWTKEEDTRLRDIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKK 942
            KWT+EED RLR+IVE  GA+NW+ +A  LG +RSDVQCLHR WNKVLRPGL KGPWT +ED IV++ V   GA  +KWSV+A++LPGRIGKQCRERWFNHLDP IKKG+W+PEED I+F  Q   GNRW EIAKLLPGRTENAVKNR+NSSARK+
Sbjct:    1 KWTEEEDNRLREIVETFGAKNWKRLAMLLGNVRSDVQCLHR-WNKVLRPGLSKGPWTADEDKIVKDMVLRHGAGNIKWSVIAAQLPGRIGKQCRERWFNHLDPEIKKGDWTPEEDNILFETQRVHGNRWSEIAKLLPGRTENAVKNRWNSSARKR 154          
BLAST of mRNA_E_fasciculatus_S2_contig7.15136.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GEG8_9STRA)

HSP 1 Score: 246 bits (628), Expect = 3.390e-72
Identity = 113/182 (62.09%), Postives = 138/182 (75.82%), Query Frame = 1
Query:  472 GGKWTKEEDTRLRDIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQ--LTPDLLNKLKEA 1011
            GG WT  ED  LR  VE HG RNW+ +AE LG  R+DVQCLHR WNKVL+PGL KGPW +EED +VR+ V   G  +V+WSV+AS+LPGRIGKQCRERWFNHLDP+IKKG W  EED ++F AQ  +GN+WCEIA++LPGRTENAVKNR+NSSAR++W  +      Q    P L+ ++KEA
Sbjct:   11 GGNWTAAEDAELRVAVEAHGGRNWKRIAETLGHGRTDVQCLHR-WNKVLKPGLVKGPWLKEEDDVVRDMVMKYGVGQVRWSVIASKLPGRIGKQCRERWFNHLDPAIKKGGWMEEEDLLIFQAQREVGNKWCEIARMLPGRTENAVKNRWNSSARRRWFKETGSKMEQDARVPMLVEEIKEA 191          
BLAST of mRNA_E_fasciculatus_S2_contig7.15136.1 vs.
Match: Hypothetical (protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X3E5_9STRA)

HSP 1 Score: 257 bits (657), Expect = 9.230e-72
Identity = 116/163 (71.17%), Postives = 136/163 (83.44%), Query Frame = 1
Query:  460 KGPKGGKWTKEEDTRLRDIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWL 948
            + P GGKWT+EED RLR+IVE  GA+NW+ +A  LGT+RSDVQCLHR WNKVLRPGL KGPWT  ED +VR+ V   GA  +KWSV+A++LPGRIGKQCRERWFNHLDP IKKG+W+P+ED ++F  Q   GNRW EIAKLLPGRTENAVKNR+NSSARK+WL
Sbjct:   91 RAPVGGKWTEEEDRRLREIVETFGAKNWKRLAMLLGTVRSDVQCLHR-WNKVLRPGLSKGPWTAAEDRVVRDMVLRHGAGNIKWSVIAAQLPGRIGKQCRERWFNHLDPDIKKGDWTPDEDAVLFETQRVHGNRWSEIAKLLPGRTENAVKNRWNSSARKRWL 252          
BLAST of mRNA_E_fasciculatus_S2_contig7.15136.1 vs.
Match: Hypothetical (protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HUA2_9STRA)

HSP 1 Score: 254 bits (649), Expect = 7.180e-70
Identity = 134/227 (59.03%), Postives = 152/227 (66.96%), Query Frame = 1
Query:  445 KGARSKGPK---GGKWTKEEDTRLRDIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWL-DQNPGGASQ--------------LTPDLLNKLKEAYEQMQVQPASGSQGMSDESG 1071
            KG R K  K   GGKW+KEED RL+ IV+ HGA+NW+ +AE LG  RSDVQCLHR WNKVL+PGLHKGPW   ED +VR+ V   G  KVKWS +A+ LPGRIGKQCRERWFNHLDPSI K  W+ EED I+F AQ   GNRWCEIAKLLPGRTEN VKNR+NSSARKKW  D+   G +               L PDL   +K A    Q     GSQG   +SG
Sbjct:  229 KGVRLKPRKPSQGGKWSKEEDARLKGIVQEHGAKNWKKIAELLGHTRSDVQCLHR-WNKVLKPGLHKGPWQAAEDEVVRDMVIRHGVGKVKWSDIAALLPGRIGKQCRERWFNHLDPSISKAPWTEEEDTIIFEAQQIFGNRWCEIAKLLPGRTENMVKNRWNSSARKKWFADRKAEGGNLAKMLATRSDANLTGLPPDLAAAVKAAR---QTATNGGSQGDQKKSG 451          
BLAST of mRNA_E_fasciculatus_S2_contig7.15136.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPT5_9STRA)

HSP 1 Score: 242 bits (617), Expect = 1.710e-67
Identity = 107/161 (66.46%), Postives = 131/161 (81.37%), Query Frame = 1
Query:  472 GGKWTKEEDTRLRDIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVELSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQ 954
            GGKW+ EEDT L++IV+ HGA++W+ VA  LG  R+DVQCLHR WNKVLRPGL KG W++EED IVR  V   G  KV+WS +A +LPGRIGKQCRERWFNHLDP+IKKG+W+ +E+ I++ AQ + GNRWCEI+KLLPGRTENAVKNR+NS   KKWL +
Sbjct:   72 GGKWSTEEDTLLKEIVQVHGAKSWKKVAGLLGKTRTDVQCLHR-WNKVLRPGLQKGAWSKEEDQIVRNMVAQVGVVKVRWSTIAEQLPGRIGKQCRERWFNHLDPTIKKGDWTRDEEIIIYEAQRHFGNRWCEISKLLPGRTENAVKNRWNSCTMKKWLKE 231          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7.15136.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized0.000e+095.47protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Hypothetical1.960e-8277.58protein (Fragment) n=1 Tax=Dictyocha speculum TaxI... [more]
Hypothetical9.650e-7875.00protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Homeodomain-like1.670e-7673.08protein (Fragment) n=1 Tax=Tribonema minus TaxID=3... [more]
Homeodomain-like1.200e-7561.46protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Uncharacterized5.910e-7372.26protein (Fragment) n=1 Tax=Aureococcus anophageffe... [more]
Hypothetical3.390e-7262.09protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014... [more]
Hypothetical9.230e-7271.17protein n=4 Tax=Pelagomonas calceolata TaxID=35677... [more]
Hypothetical7.180e-7059.03protein n=2 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
Hypothetical1.710e-6766.46protein (Fragment) n=1 Tax=Spumella elongata TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7contigE_fasciculatus_S2_contig7:2355..11918 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1133.2
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FRA0
Model size2778
KEGG koko:K21769
KEGG Pathwayko04218,ko05166,map04218,map05166
Hectar predicted targeting categoryother localisation
Exons16
EggNOG free text desc.RNA polymerase II transcription regulator recruiting activity
EggNOG OGsCOG5147@1,KOG0048@2759
Ec32 ortholog descriptionSANT/Myb domain transcription factor
Ec32 orthologEc-26_002380.1
Cds size1929
COG Functional cat.ADK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7.15136.1prot_E_fasciculatus_S2_contig7.15136.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7 8003..11918 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842357.056722-UTR-E_fasciculatus_S2_contig7:2354..24441696842357.056722-UTR-E_fasciculatus_S2_contig7:2354..2444Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7 2355..2444 +
1696842357.0705-UTR-E_fasciculatus_S2_contig7:2921..32301696842357.0705-UTR-E_fasciculatus_S2_contig7:2921..3230Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7 2922..3230 +
1696842357.081895-UTR-E_fasciculatus_S2_contig7:6433..65291696842357.081895-UTR-E_fasciculatus_S2_contig7:6433..6529Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7 6434..6529 +
1696842357.0980074-UTR-E_fasciculatus_S2_contig7:7090..71971696842357.0980074-UTR-E_fasciculatus_S2_contig7:7090..7197Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7 7091..7197 +
1696842357.1117582-UTR-E_fasciculatus_S2_contig7:7343..74431696842357.1117582-UTR-E_fasciculatus_S2_contig7:7343..7443Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7 7344..7443 +
1696842357.122624-UTR-E_fasciculatus_S2_contig7:7673..78141696842357.122624-UTR-E_fasciculatus_S2_contig7:7673..7814Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7 7674..7814 +
1696842357.1318407-UTR-E_fasciculatus_S2_contig7:7996..80021696842357.1318407-UTR-E_fasciculatus_S2_contig7:7996..8002Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7 7997..8002 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842357.1416368-CDS-E_fasciculatus_S2_contig7:8002..81521696842357.1416368-CDS-E_fasciculatus_S2_contig7:8002..8152Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 8003..8152 +
1696842357.1515589-CDS-E_fasciculatus_S2_contig7:8369..84591696842357.1515589-CDS-E_fasciculatus_S2_contig7:8369..8459Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 8370..8459 +
1696842357.1618392-CDS-E_fasciculatus_S2_contig7:8646..88981696842357.1618392-CDS-E_fasciculatus_S2_contig7:8646..8898Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 8647..8898 +
1696842357.1750867-CDS-E_fasciculatus_S2_contig7:9229..93311696842357.1750867-CDS-E_fasciculatus_S2_contig7:9229..9331Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 9230..9331 +
1696842357.1890552-CDS-E_fasciculatus_S2_contig7:9539..98331696842357.1890552-CDS-E_fasciculatus_S2_contig7:9539..9833Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 9540..9833 +
1696842357.2021341-CDS-E_fasciculatus_S2_contig7:9991..101741696842357.2021341-CDS-E_fasciculatus_S2_contig7:9991..10174Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 9992..10174 +
1696842357.2146194-CDS-E_fasciculatus_S2_contig7:10435..105251696842357.2146194-CDS-E_fasciculatus_S2_contig7:10435..10525Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 10436..10525 +
1696842357.2271008-CDS-E_fasciculatus_S2_contig7:10693..108911696842357.2271008-CDS-E_fasciculatus_S2_contig7:10693..10891Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 10694..10891 +
1696842357.2363956-CDS-E_fasciculatus_S2_contig7:11171..114381696842357.2363956-CDS-E_fasciculatus_S2_contig7:11171..11438Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 11172..11438 +
1696842357.2475915-CDS-E_fasciculatus_S2_contig7:11615..119181696842357.2475915-CDS-E_fasciculatus_S2_contig7:11615..11918Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 11616..11918 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7.15136.1

>prot_E_fasciculatus_S2_contig7.15136.1 ID=prot_E_fasciculatus_S2_contig7.15136.1|Name=mRNA_E_fasciculatus_S2_contig7.15136.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=643bp
MGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQLTPDLLNK
LKEAYEQMQVQPASGSQGMSDESGTDNDSKEPSTRAAAAQHHRRHDSTPS
AFGDVNLLHAGGEQLTSPPHPMHARRHSAAGALSGMLSESPESERRFRRR
MGQEDVEARSAQAQGAVRARAGASERGGRESEKHTSSLAVVNELQTVKTE
ELEQSATTKERSEKQDHSHLLAPHGSAEAPPGGRGQSHMLHRMSPPQHPH
SRLPGHPPRPFTGPSRSTGAGPGGAGVGDGGMGALLGVASQLRPPRIDTN
SSVKRESGGGPASLSQLLLTSPFGSNDGARFAATNDAIGQPNTHTAELET
SNAAAGESYSSATAESPVSQAVRETRRQGTRMQEGEQVPLSVLPYFRFLS
EEAQRNVMSQLIDNFQTTSIGKRGVASTSSTSAATSSASSPGGLAFMRSP
FAKGLAPVGSGGATASAGNGSSSPPFEVDAMMVDHHRVGGTTGASISAAV
AAVEAHASSDHEMNRVLPAPSLSTAANSEAAMEQSRLPPLRQDPSDGRNS
GAFGRVNGSSMGKNGSSLDIAGPNPPAAPASTGRDPTTRSPRSHMRHASE
SALPSAAMAAAAAAAMQTEPMDDGGRRSDWNQRMGRHRPPSR*
back to top

mRNA from alignment at E_fasciculatus_S2_contig7:2355..11918+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7.15136.1 ID=mRNA_E_fasciculatus_S2_contig7.15136.1|Name=mRNA_E_fasciculatus_S2_contig7.15136.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=9564bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7:2355..11918+ (Ectocarpus fasciculatus EfasUO2)
ATGATGGATGGGCAAGAGCAGCTTCGTTCGGCGACGCTTCCTTCGCCCCG TAACCCCCCGGAAAAACGCATGTCTCGGTCAGCTTCCCAGGTGGATAGAG CTAGCTGGTTGGACCTCTCTCGTCCATGAACGAAGAACGCTCAGCCAAAT ATTAATATTGACGACTTGTGCGGGTTTCAAACAGTGATCGCTCGCCTCCC GCCACTTACCCATTTGTGATATCAAAACAAGGAGCAGAAGCATCAACAAG AAGACGTTGCTGTAAAATTGTACCAGTAAAATTTGTACGTTCAAAGATTT TGGTTGGTTGTTCAACTGCTCGTCTCTTCTTCGTGGTCTTCCTTTGCTCC GCGCTCCTCTGTTCCAGTGATGTCATGCCTAACGTTGTAGAGGCTAGCTC CACCTGCCGCCCTTCTGATGTCGTTTTCGATCTCCGGTCGCCCCTGCGCT GCTCTTTGACACGTCGTTACAACACCAAACGTACCGTCGTTGTGTTTTAC CCCCCTCTGGCGTCGGACTGTCTGTCCTGTGTCGTGTGTGTGCGTGCCAC GGCGTATTTTTTAAAAGGCGGTTAAACGCCTCGATGCTAGAATGTCACCG CACGCTGCCAAAGCCCGAGGTATCTTCGACAGAGGCGCCTCCGCAGCACC CATCGGCGGTGGAAACGAAATGGGAGGAGTCCAGCCTATCGATGAAAACG ATGACGGACTTATAGCGGAGGCGAGTCTTTTTGACGCTGCTGGCGGAGGA AGCGAGGGGGATTTGGGTGGCGTGGCACCGGGGGATGAAGACTTGGCGAT GGCATGGTCTGGCTCGCGGCTAGTACGGTCAGCCTCCATGTCTTCTACAG GATCTGCGGATGCTGAGGAATCCGAGGTAAGACCGGGGTGTTTGTACACG ACCCTCGTTGGTTTACTGCTGTGCTCGTTTGTTCATGTGTAAGACAGCCG TCAAGAGGTTCTGAGTGTCCTCTCTCCACAAAAATTTCGGAATTTTTATT GTTACGAAGAGACGGAAGATCTGCGTACTGCGCGCCTTCTTCAAAGCTTC AAAGGTAGGTGTGCCCTTGGCCTTGTGTATACCATGTATTACCGACGCAT CCAGTTTGTTCTCGCAATGTATAGTTGTCCATATAGTCCAACTATATTTG GCAGGTTTTTCCGACGCACAGCAGTTGGCAGCTGGTTGTTCCATTCTACA GATATGCCCATCTAGCGCAACGACCTCCGGCATCTGGTTGGCCAAGGTTT CGCTTTTTCAGGACGTGGTGCCTGAAAGATACCCCGGCGGGAATGCCACG CCGGGCGCGAAAGCCACACCGCCACAAAAGGGCGCGCCTCGCATGTGTTA ATGTGCATTCATATGATGTGTCTATGGGGACAGGCAGCATAGACTAATAT ATCTATGTAAATATATATAGTAGTATACGCCGAATGATTCGTCTCCGAAC TCCTTTACTTGCCTCGACATACTGCGAAACCATCCAAGGGCTGAGGCAGG CCCCTATCGGGCTTGACCCTGTCGGGCACGCTCTTCTACAATACCCCCCA TCCTTTCATCGTCTGTACATCGTCCAATTCCTCTATCGCTCCACATCATT GGCTGAGATGTGTTGTTGTTGTTGTTGTTGTCTTTACATTAGAAACCGCT CCGGTCGCCGCTCAGACCTTCTAGACTATCCTTCCTGGCCCAACTGACTG GCCTAACTGACGCAGACGCCTTCCGTAATCACAAGCCAACAAGCCAACTG AGAAGGGTACACCTACATGTAGATCTTTCCTCTCCCTCGTACATACATGT AGGCAAGAAAATAAGTTTTCGTGTGTGAAATGAGGTAGGAATCGAGGAGG GTATGCTCTTGCCGGCGATCCTATCATCTCTTCCTCGTGTGTGTATGTAA CTGCGGGCTGAGCCCCCCCCGTTCCTTGTTCGGTCTCGTCTTGTCCGTGT AACTCGGGAGCGTTGACACAAAAATAGAGCTGAAATTTAAGTTGTTTAGT CGCACGACGGAATGACTTCATTTCTGCCCAGCGAAACCGAAATCTGTGGG CCAGTTTTTCTGTCTGGCTAACAGGTTACGTTTTGGAAAACTATTATGCG TGCTAACTGCTGACACAACACACATATTATACAGCAGTTTTTCGATCCTC CAACAAAAGCAATGAGGGTTCTCAGAGAGACAAAGCGTCAGTGTGACAGC AGTGTAATAGATTAGTTGTCGTGGAGTAGAGAAGGAATGAGATAGAATTA CATTGTATGCATTATACCTGGATCTTTGCGTTTTTTGTCGCCAGATGTCG CGATGTCCAGGTCAGGCTGTACAAATCTTGTTCTTCGTTTTCGAACGGTA ATACTCCCCCCTTTGAATATTGCGCTTCCCCCCCCGCGCGCTGCGAGGTC AATGGTCTAACGACTACGGCATGCACGACTAAGAGTACATCCCCCCGCTT GAAAAAAACTCCCAAAAGTATGGATATACAACAAGACAACAACATAAGAA GTAATACCAATGCCAGCTACACAAGATGGCCGCCAATCTGTCTTTTAAGC CTGCTTGCATACCCACAGGGCAGATACGGCTTCATGCCGCTCAGGGAACT ATAGAAACACCGGTTGGTGTTGTTGTAGTCATTGCTAGTTTATCCCGTAC TCGTTTTCGGTGGGTAGAGATGGATTCTTGTGTTTTTGTAGAAAAAGAAA GGAGAGCTGCATAAACGCGATAAATTTCGCGGCGAACATCGTCGCCCCCC CGGGGCGAACGCACGGACAGAAGCACAGAAGCTACGGTGTTTCCTTCCAG TAGTTTGAGACGTTGTTGTTGTGGTGGTGTTGTTTCACACAGGCAGTAGA ACAACGAAAACCATGGAGGTTTGTTGGCGACTTGTGTTTGCTGGCCTCGG ACAGAATGCCACAGTGGAGTGGATACCCCAACTTGTAGACGTTTGTTTTC TGTTTTCCATTTATTTTATACCTCCAAACACTCTTTTGATAGAAAAAGAG TCCCCGGACACTTATCGTTGTCGGCTTTCTCGGGCATTTTTTTAGAGGGC GGATTTTTGTACTTTATAGAGGATATTGCGTCACGCGGCGCTTATGGCAG TTTACGAGGATATGTACCACACGTAATAAGAGACATGAATCGATACGACC GATCCATTTGGCGAGAGACACAGCAGTACTCACTCTTTTTCATCTGTGCT GGATGGGGCGGGGCGTCAACGAAGGTTGAGGATAGGCTCGTATCGCTCTT TCCCCTACGGTTGCTATGGGAGGAGGTGTCATCCCAGTCAACAGACGAAG AGCGCAAGCTCCCCATGTGTTACTGCCGTTCCTGGGTATGCTTTCTCGTA GATTCTGTCCAGGACCGACATCGTGTCTAGTGTGTGTATTTGTTCCATGT TGTTTTTATTAATCCCGGGACGTTTATTTCCCCCGCCCTATATTTTTTCC TTGGGAAGCTCTCACCCCAACCTCGTTAGTAGCCCCGATGTGATCATTTT TCGAAAGACAGACAAAACAAAGGACGAGACAAATCGATCTCTTCCCGAGA ATATTTGATCGATCGGTCAGTCACTCTGTATGCAAGTGTTAGGAGAAACG CTGAAGCCGCAGCCCATCATAAGTTTCTGACATCATAAGTTTCTGACCTT TCTTGCGAAGAGCTGTGGCTTTGGAAATGCGTTCCTTTCGTTGAAGAGTA CAAATTATGGCATTTCAAATGACATGAGGAGAAGGAAAACCTGGAATACC TACTGCGTACAGACGATCGAGTTTTGTGAGTGAAGAAAGCAGGAACATCA CGCAAATCACAACCCGGGGGTGCGACACACACGCACCATCCACATTCAGC GTGCGCCCTGGTTCTGAAAAAGAAAAGTTGTTGTAGCGGGGAGGTTGAAG TTGTGTCTTTGAAGCGGGATCAACTGCCGAATGTGCTGTTAATTGGAGAG ATGTTGTTAGTCAGGGTCTACGGTTGAATCGTTGTGCGTGCGTTGTCGTC GAAATGCCAACCGCGGGGGTCTGATATCTTGTAGTGTTTCGGCTCATACG CGAGTATACCCATGTACTGCTTTTGTCAGGAGTGGCTGACGAGCTTGGTG GAGAAGAGCAAAGCAGCGGGAGCCAAGGGAGCCCGGAGCAAGGGCCCGAA AGGCGGCAAATGGACCAAGGAAGAGGTGAGGGAAGATGACCGATGACCAT GTTCAGCCGTGACGTGGGTCATTTACTTGTTCGGGTCTAAATGCTGGGAG AGCTTAAATGGTTTTAGGTGCGAACCGGTCGTATTTGTTGATTGCTACAG CACCTTGTTTTTAGGGTTCGGCTGTTTTTGCGCACCAAATGCCACTCTGG ACGGTTCGCGATTCTATTCTCAAATCGAATGTGTGACGACAAGGTGATAG TAATAAGATTCACCAAAAAGGCATTTGACACACGTAAATATGAAGTAAAT ATTAAACACACGGGGAGGATATAAGTTGCATACATACGTGCAGACGAAAT CCCGATACACACTTTGAAATCGATCCAGGTTTTGCAAGTCCGTATGCATT GACGTAAATTTGAACCAAGCAAAATACCATGTCTGACATCCAAATCGACT GATAGCAGGTGTGCTTGTTTGTGATGTGGCACGCTTCTGTCAAAATGCTG TTTTCCATTGCTGCACCGTGCTGTACCGGGCGCGTTCATAGCTGCGCCCA ATGGTTGAAAAATGCCCTCTGATGCTTCTACCGCAGGACACCCGTCTTCG AGACATCGTCGAGCACCACGGAGCTCGGAATTGGCGGATGGTCGCCGAGC AGCTGGGAACTCTTCGTTCTGACGTTCAATGTCTTCACAGGTAGTTTGAT GGTGCAGTCGAGGGCATACGCCCCTAGAAATGTTGGTGAGTATTTGTCGT AGGGATGCCCGAGTTGAAAGAAAAAACACCCCGTTGTCCATTAGACTCTT GGATAGGTAATGATATTCTACCGCTGTCATATCTCGCAGATGGAACAAGG TTCTTCGGCCAGGCCTTCACAAAGGCCCTTGGACGGAAGAGGAAGACAGC ATTGTCAGGGAGTGCGTGGAGCTTAGCGGGGCTCAAAAGGTTTGTTTCAC TTTCATTTATTTCGTTGAGCAGTGCCGCTTTCGGTCCGATTTTTCGAATC TGCAAGACATGGGTCGACGTCGCCGCATTGCGTGCGTGTTTTTGATCGAT CGTTTCTCTGGCTGTGTTCTTGGACCACTACTGCTTATGTTAGCTTCTGT TAGCTCTTGCAAAAGAGGCCTGTTCACGGACTGAGATTGTTTCCTCTTTG TTGCCTGCCCACCGAGCAGGTTAAGTGGTCCGTCGTGGCGTCCCGTCTCC CAGGCAGGATAGGCAAGCAATGCCGCGAGCGATGGTTCAACCACCTCGAC CCTAGCATTAAGAAGGGTGAATGGAGTCCGGAGGAAGATCGAATAGTGTT CGGGGCACAGGTAAGGTTATGAAGGTTATGCTCAGGGTACAGCTGACCCG TGCTTTTCCACTCAGTAGCGTGATGAAATGAGATTGCCGTTTTCACCGTG TCGACGCGGGTGTCATCACTGGCGTGGAGTGGAGATGTACTCTGCTTTCG TCCTGACCCTTTGTTTTTCGTATTTGTGTTCGGTTTCACCAGGCGTACAT GGGCAATAGGTGGTGCGAGATCGCAAAGTTGCTTCCAGGTCGAACAGAGA ACGCTGTAAAGAACCGCTTCAACTCGTCGGCGAGGAAAAAGTGGCTTGAT CAGAACCCAGGAGGCGCTAGTCAGCTTACACCAGATCTTCTAAACAAGGT GGGAACGAGCAAACTGCGCAAGTGCGCACACATTTGCGACGTTGTGTTTC ATTGCAGCACAAAAAACAGGCTGGTTGAAATGGAAGCGCAAGTCATCATC ATGCAGCATTGCCTCTGGCATTGGTTTGGCATTGGAACGGTAGCAACTGC CGACCTTCCCCACACCTCTGAATGGCCTCTCTACGTGTCTGTTGGCTGTG CCGATTGTACTTCAGCTGAAGGAGGCCTACGAGCAGATGCAAGTACAGCC GGCTTCAGGCTCCCAAGGAATGTCCGACGAAAGTGGAACCGACAACGACT CCAAGGTTTTGTCTGACGAGAAGCGTGCTATGCTATCATACTGCTTTAGT CCACGATGTCGCAGCATGGGGTTCTTGTCAGTGCAACACGGTGTTGTGTT CGTTTGCAGCAGCTCCAATGTAGGATTTCCCTGACTGATGTTGTGGACAG CTTGTGACTGGCTCGTTCCGTTGTTCGTGTCTGTTTGTCCAGGAGCCTTC CACCCGAGCTGCTGCCGCCCAGCATCACCGACGCCACGACTCCACCCCCA GCGCGTTCGGTGATGTTAATTTACTCCACGCCGGCGGCGAGCAGTTGACA TCGCCTCCGCATCCAATGCATGCCCGCCGGCACTCAGCTGCTGGGGCGCT ATCGGGAATGCTGAGTGAGTCTCCTGAGAGCGAACGAAGATTCCGTCGGC GTATGGGGCAAGAAGACGTGGAAGCACGTTCCGCCCAGGCACAGGTGCGC TTTCGATAAACGTCGGTGGACGAAAGGTCTTGACAATATACGTCGCGAAT AAAATGAATGAACCGTAACGAATTATGTTTGCTCTGCCACACGGGATCTA ATTTCTCTCAGCCACCGCTGTTGGCCACCATGGTGTGCGTTGCCCAATTG TTTTTTTCGTGTGGACCCTGTATGAGCCGATTGTAACACGGCGAAGAATG GAGACGTTGTTCTGCGAATGATGATTCCCGCCCCTTCAAGCTTGGTCAAA ATATCGCGCTGTCTGCAAACCATCCACATCCTCTCACCCTGTGTTTGTAC GGTGTTGCTTGCCCACGTGTACCAGGGGGCAGTTCGTGCTCGCGCAGGTG CTTCCGAGAGAGGGGGGCGTGAGTCAGAGAAGCATACGAGCTCTCTCGCA GTTGTCAACGAGCTCCAGACTGTCAAGGTGTGCATGCATGCTCTCTTCTC TTATGATTATGTTGTCGTGATGTTGATCGACTGTACCCTGAGTGGACGGT GTAGTAGTTGCATGGCATGGCTGTTTGCGCGCCGTGTATCCGATCGCAGT GGGCGTCTGCTTGAACATGCAGTGTACGGTTTGGTCATGTCGGTGTGGAT ATCAAACTGCACCCCACCCGCAACATGCCTTGCAGACGGAAGAACTGGAG CAATCGGCCACCACGAAGGAGCGGTCTGAGAAGCAAGACCATTCACATCT GCTAGCGCCACATGGCTCCGCGGAAGCACCACCTGGTGGACGAGGCCAGT CCCACATGCTCCATCGCATGTCGCCCCCACAGCACCCCCATTCGAGACTT CCTGGGCACCCACCAAGGCCGTTTACGGGGCCAAGCAGGAGCACAGGGGC TGGTCCTGGCGGTGCAGGAGTCGGAGATGGGGGAATGGGCGCTCTCCTCG GGGTAGCGAGCCAGCTTCGACCTCCACGGGTAAGGTCCTACATCGTGCTT GATTTTGACAGTTCGTGCCCAAACCAGTAGCCGTTCACTAAAATGGCGCC CGAGCTGTTGCGAGGATGCGCGTGCGCGACTCTCACCCCACAGTGATCTC CGCGTTTCGTCGTCCCACACATGCCTTCTCCTTACAGATCGACACGAACT CGAGTGTGAAACGAGAGAGCGGCGGCGGACCTGCAAGCCTCTCGCAACTG CTCCTCACTAGCCCGTTCGGTTCGAACGATGGTGCACGTTTCGCTGCGAC GAACGATGCCATAGGCCAGCCAAACACGCACACCGCGGAACTGGAAACGT CGAACGCGGCGGCAGGAGAGGTACGTACGGATGTGGTTATGTTCTCTTGT CATGCGATCTTGCCCGGTCTTTAACGCTCGCCGCTCTCGCTTTGCGCCTA GATCTCTTTTATCTCCCGCCGTAGCAAGGCGGCCTGTCTGCTTTGGCATG GAATCCTTTCCGATGATTGGTCCTCATTCATGTTCTGGTGCGACATGCAG TTTCGTCGCAATAATGTAATGGCGTGATAGATTTGCAATGTCTAAAAACA CTACGCCACCGCTGTTTTTATGTCAATACAGAGCTATTCGTCCGCTACTG CGGAATCTCCTGTTTCTCAAGCGGTGCGTGAAACGAGACGCCAGGGGACG CGGATGCAAGAAGGAGAGCAGGTGAGAGCGTCACTGACCGCGTTGATGGA TACGTACAGAGGGAGCAGCATCGTGGGCAGAGTCTGCATTGAGCATGGAG ACTTGGATCTTCCTTTTAAGCAGCACGGCCGTTGCATCCTTGATTGTACT CTAAATGCGCTCGGAATTATGCCGCTCATCATGTGCCAGGTGCCGTTGTC GGTCCTTCCGTATTTCCGCTTCCTGAGTGAAGAAGCCCAGAGAAATGTCA TGTCTCAGCTTATCGACAACTTCCAAACCACGTCCATCGGGAAAAGAGGG GTTGCGTCAACGTCGTCTACGTCGGCAGCCACCTCCTCGGCTTCGTCTCC CGGAGGACTAGCATTCATGCGATCACCGTTCGCAAAGGTGACTTGCCATG CGGTGCACTCTTTTTCCTTTGGCGTCCATCTGGGGCACAGGGGCAGGCAA TGGAAATCTCTACCTGGCGTTCTGGATGATGTATCGCATTGAGAAAAGGA GCTTGCGTGATAGGTAGCGGATTGGTATGAACTTATCCGCAGAAGCGTAA AAGGGTGTGAACGAGAAATTGCTGCGGGAACACGTCGCTCAGGTTCACGC AACGTAGACAACTGTTGCCAGTTCCTTGACAAACACGCGTTGATCTGTTA CACATTACCGCTTCCAGGGACTCGCACCGGTTGGATCCGGTGGGGCGACA GCCTCGGCCGGTAACGGATCCTCGTCGCCACCATTCGAAGTGGACGCGAT GATGGTGGACCACCACAGGGTAGGCGGCACCACTGGGGCATCTATTAGTG CCGCTGTTGCTGCTGTTGAGGCGCATGCCAGCAGCGATCACGAGATGAAC CGAGTGCTACCCGCACCCAGTCTCTCTACCGCAGCGAACTCGGAAGCGGC AATGGAGCAAAGCCGCCTCCCTCCTCTCCGGCAGGTTTGTCGCTCTACTG CAAGCCTGTACAGTAGCGAGATTGCAAACGTTGTCCTTCGTGCGTGTATG AAGTGTCTGCCCCCTCCCAGTACGCACGCATCACTCACTGCCAGTTGACT CGCTCTCACAACACAATCTCTTTCTTGGAATCCCGTGCCGTTGCACATCA TGCCACTGCAGGATCCCAGTGATGGCAGGAATTCAGGCGCATTTGGCAGA GTGAACGGATCTAGCATGGGCAAAAATGGCAGCTCCCTCGACATCGCGGG CCCTAACCCTCCTGCAGCACCCGCAAGCACGGGTAGAGACCCTACGACGA GGTCGCCACGATCACATATGAGACATGCGTCGGAGAGTGCACTACCATCC GCTGCCATGGCTGCCGCCGCTGCCGCTGCAATGCAGACAGAGCCGATGGA TGACGGCGGAAGGCGTAGCGATTGGAACCAACGGATGGGTAGGCATCGGC CACCGTCGCGTTAG
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7:2355..11918+

>mRNA_E_fasciculatus_S2_contig7.15136.1 ID=mRNA_E_fasciculatus_S2_contig7.15136.1|Name=mRNA_E_fasciculatus_S2_contig7.15136.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1929bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7:2355..11918+ (Ectocarpus fasciculatus EfasUO2)
ATGGGCAATAGGTGGTGCGAGATCGCAAAGTTGCTTCCAGGTCGAACAGA
GAACGCTGTAAAGAACCGCTTCAACTCGTCGGCGAGGAAAAAGTGGCTTG
ATCAGAACCCAGGAGGCGCTAGTCAGCTTACACCAGATCTTCTAAACAAG
CTGAAGGAGGCCTACGAGCAGATGCAAGTACAGCCGGCTTCAGGCTCCCA
AGGAATGTCCGACGAAAGTGGAACCGACAACGACTCCAAGGAGCCTTCCA
CCCGAGCTGCTGCCGCCCAGCATCACCGACGCCACGACTCCACCCCCAGC
GCGTTCGGTGATGTTAATTTACTCCACGCCGGCGGCGAGCAGTTGACATC
GCCTCCGCATCCAATGCATGCCCGCCGGCACTCAGCTGCTGGGGCGCTAT
CGGGAATGCTGAGTGAGTCTCCTGAGAGCGAACGAAGATTCCGTCGGCGT
ATGGGGCAAGAAGACGTGGAAGCACGTTCCGCCCAGGCACAGGGGGCAGT
TCGTGCTCGCGCAGGTGCTTCCGAGAGAGGGGGGCGTGAGTCAGAGAAGC
ATACGAGCTCTCTCGCAGTTGTCAACGAGCTCCAGACTGTCAAGACGGAA
GAACTGGAGCAATCGGCCACCACGAAGGAGCGGTCTGAGAAGCAAGACCA
TTCACATCTGCTAGCGCCACATGGCTCCGCGGAAGCACCACCTGGTGGAC
GAGGCCAGTCCCACATGCTCCATCGCATGTCGCCCCCACAGCACCCCCAT
TCGAGACTTCCTGGGCACCCACCAAGGCCGTTTACGGGGCCAAGCAGGAG
CACAGGGGCTGGTCCTGGCGGTGCAGGAGTCGGAGATGGGGGAATGGGCG
CTCTCCTCGGGGTAGCGAGCCAGCTTCGACCTCCACGGATCGACACGAAC
TCGAGTGTGAAACGAGAGAGCGGCGGCGGACCTGCAAGCCTCTCGCAACT
GCTCCTCACTAGCCCGTTCGGTTCGAACGATGGTGCACGTTTCGCTGCGA
CGAACGATGCCATAGGCCAGCCAAACACGCACACCGCGGAACTGGAAACG
TCGAACGCGGCGGCAGGAGAGAGCTATTCGTCCGCTACTGCGGAATCTCC
TGTTTCTCAAGCGGTGCGTGAAACGAGACGCCAGGGGACGCGGATGCAAG
AAGGAGAGCAGGTGCCGTTGTCGGTCCTTCCGTATTTCCGCTTCCTGAGT
GAAGAAGCCCAGAGAAATGTCATGTCTCAGCTTATCGACAACTTCCAAAC
CACGTCCATCGGGAAAAGAGGGGTTGCGTCAACGTCGTCTACGTCGGCAG
CCACCTCCTCGGCTTCGTCTCCCGGAGGACTAGCATTCATGCGATCACCG
TTCGCAAAGGGACTCGCACCGGTTGGATCCGGTGGGGCGACAGCCTCGGC
CGGTAACGGATCCTCGTCGCCACCATTCGAAGTGGACGCGATGATGGTGG
ACCACCACAGGGTAGGCGGCACCACTGGGGCATCTATTAGTGCCGCTGTT
GCTGCTGTTGAGGCGCATGCCAGCAGCGATCACGAGATGAACCGAGTGCT
ACCCGCACCCAGTCTCTCTACCGCAGCGAACTCGGAAGCGGCAATGGAGC
AAAGCCGCCTCCCTCCTCTCCGGCAGGATCCCAGTGATGGCAGGAATTCA
GGCGCATTTGGCAGAGTGAACGGATCTAGCATGGGCAAAAATGGCAGCTC
CCTCGACATCGCGGGCCCTAACCCTCCTGCAGCACCCGCAAGCACGGGTA
GAGACCCTACGACGAGGTCGCCACGATCACATATGAGACATGCGTCGGAG
AGTGCACTACCATCCGCTGCCATGGCTGCCGCCGCTGCCGCTGCAATGCA
GACAGAGCCGATGGATGACGGCGGAAGGCGTAGCGATTGGAACCAACGGA
TGGGTAGGCATCGGCCACCGTCGCGTTAG
back to top