|
|
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6995.15132.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y8_9PHAE) HSP 1 Score: 634 bits (1635), Expect = 2.590e-219 Identity = 344/407 (84.52%), Postives = 358/407 (87.96%), Query Frame = 1
Query: 1 AKLALHVWALTAHAREVMPAQDGFVWTHGTYQSHTLTTKHGEVPPLEGWARMWTDPLDTEVRLVLPEGLELSSLFYFWLSSTLSRYLGAEVTMEEREIFRENVFGLSLSATGLSEVSGKPSSWEAYEAADKKRPVFHTLPGARGTAFFGWKWGAFSAFMDARARVLESDSWEGGESLVHVPGGEVALSWAGTLERFLAEFCHGRGLGILHPNLNGDVSFARQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLSQSQTAHTPTPTLRGTEDGGG-REPEELVLTYRDAHNVVVKYPSVSSVSAYDLLSRRHRDLTHLRLQAYRFFQRLRASAERNKDLEDLWKRPGVPKPNYGLAKFLIYQPQFGMGNQLRALDAALAVARVLGRVLVVPDYMADNGEGESRR 1218
A+LALHVWALTAHAREVMPAQDGFVWTHGTYQ HTLTTKHGEVPPLEGWARMWTDP+DTEVRLVLPEGLELS+LFYFWL+STL+RYLGA VTMEEREIFRENVFGLSLSATGLSEVSG PSSW AYEAADKKRPVFHTLPGARGTAFFGWK GE+LVHVPGGEVALSWAG+LERFLAEFCHGRGLGILHPNLNGDVSFARQ P XXXXXXXXXXXXXXXXXXXX L SQTAHTPTPTLRGT+DGGG REPE LVLTYRDA+N++VKYPSVSSV AYDLLSRRHRD+THLRLQAYRFFQRLR S ERNKDLEDLWKRPG+PKPNY LAKFLIYQPQFGMGNQLRALDAALAVARVLGRVLVVPDY+ADNGEG S R
Sbjct: 139 AELALHVWALTAHAREVMPAQDGFVWTHGTYQFHTLTTKHGEVPPLEGWARMWTDPIDTEVRLVLPEGLELSNLFYFWLASTLARYLGAGVTMEEREIFRENVFGLSLSATGLSEVSGVPSSWGAYEAADKKRPVFHTLPGARGTAFFGWK---------------------EGEALVHVPGGEVALSWAGSLERFLAEFCHGRGLGILHPNLNGDVSFARQLPPXXXXXXXXXXXXXXXXXXXXEA---------LPLSQTAHTPTPTLRGTDDGGGGREPEGLVLTYRDANNLIVKYPSVSSVPAYDLLSRRHRDVTHLRLQAYRFFQRLRTSVERNKDLEDLWKRPGMPKPNYALAKFLIYQPQFGMGNQLRALDAALAVARVLGRVLVVPDYIADNGEGRSVR 515
BLAST of mRNA_E_fasciculatus_S2_contig6995.15132.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE24_ECTSI) HSP 1 Score: 473 bits (1218), Expect = 1.140e-156 Identity = 267/333 (80.18%), Postives = 275/333 (82.58%), Query Frame = 1
Query: 1 AKLALHVWALTAHAREVMPAQDGFVWTHGTYQSHTLTTKHGEVPPLEGWARMWTDPLDTEVRLVLPEGLELSSLFYFWLSSTLSRYLGAEVTMEEREIFRENVFGLSLSATGLSEVSGKPSSWEAYEAADKKRPVFHTLPGARGTAFFGWK------------------------------------WGAFSAFMDARARVLESDSWEGGESLVHVPGGEVALSWAGTLERFLAEFCHGRGLGILHPNLNGDVSFARQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLSQSQTAHTPTPTLRGTED--GGGREPEELVLTYRDAHNVV 885
A+LALHVWALTAHAREVMPAQDGFVWTHGTYQ HTLTTKHGEVPPLEGWARMWTDP+DTEVRLVLPEGLELSSLFYFWLSSTL+RYLGAEVTMEEREIFR+NVFGLSLSATGLSEVSGKPSSW AYEAADKKRPVFHTLPGARGTAFFGWK WG FSAFMDARARVLESDSWEGGE+L HVPGGEVALSWAG+LERFLAEFCHGRGLGILHPNLNGDVSFARQ P XXXXXXXXXXXXXXXXXXXXXX SQTAHTPTPTLRGT D GGGREPE LVLTYRDA+N+V
Sbjct: 91 AELALHVWALTAHAREVMPAQDGFVWTHGTYQFHTLTTKHGEVPPLEGWARMWTDPIDTEVRLVLPEGLELSSLFYFWLSSTLARYLGAEVTMEEREIFRDNVFGLSLSATGLSEVSGKPSSWGAYEAADKKRPVFHTLPGARGTAFFGWKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGDFSAFMDARARVLESDSWEGGEALAHVPGGEVALSWAGSLERFLAEFCHGRGLGILHPNLNGDVSFARQLPPXXXXXXXXXXXXXXXXXXXXXXTPLL--------SQTAHTPTPTLRGTADDGGGGREPEGLVLTYRDANNLV 415
BLAST of mRNA_E_fasciculatus_S2_contig6995.15132.1 vs.
Match: Uncharacterized (protein n=2 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A4P9YSI8_ROZAC) HSP 1 Score: 70.5 bits (171), Expect = 2.390e-9 Identity = 84/397 (21.16%), Postives = 149/397 (37.53%), Query Frame = 1
Query: 46 EVMPAQDGFVWTHGTYQSHTLTTKHGEVPPLEGWARMWTDPLDTEVRLVLPEGLELSSLFYFWLSSTLSRYLGAEVTMEEREIFREN------VFGLSLSATGLSEVSGKPSSWEAYEAADKKRPVFHTLPGARGTAFFGWKWGAFSAFMDARARVLESDSWEGGESLVHVPGGEVALSWAGTLERFLAEFCHGRGLGILHPNLNGDVSFA--RQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLSQSQTAHTPTPTLRGTEDGGGREPEELVLTYRDAHNVVVKYPSV-----SSVSAYDLLSRRHRDLTHLRLQAYRFFQRLRASAERNKDLEDLWKRPGVPKPNYGLAKFLIYQPQFGMGNQLRALDAALAVARVLGRVLVVPDYMADN 1197
EV+ D F W HG + T + G + W+ D E + L + +E+S ++ ++ ++RY +FREN + G+SL +E+ P W + +P + G +F W F + D R + + S + P + +W + +R L + + RG +++PN +SF+ + P L + + H L+ + L D ++ K PSV + + A + L +R+ L ++ F + N + DL+ +P K++I+QPQ G NQLRA + A+A A +L R LV+P + N
Sbjct: 128 EVIALVDSFKWPHGDTIRNIRTDRLGLEKMIMS---AWSPASDDEYAIFLEDDIEVSKYYFGFILMNINRY-----------VFRENADVLSKMMGISLYTPRWNEIVHPPLKWIPSDIVQNSTLFMFQIPCSWGAVYFPKVWREFKEYYDWRTSEVAVRKFG---SRIIAPNAH-SNTWRRSWKRHLIDLSYARGWFMIYPNFPDQLSFSTNHREPGKLSKAIQKGEHTGSKGAAGKTSSFTLTKKKLWVYTVSLHEDDSFLKSRKFWNDLNKPIKDLDVFDIYHR--KVPSVVHLFETGLGALEQLYHTNRNTKEL----FKRFYGINTVDGNNHCVLDLFGSLEREEP-VSDEKYIIFQPQLGFNNQLRAYEDAIAYAHILKRTLVLPPVQSTN 499
BLAST of mRNA_E_fasciculatus_S2_contig6995.15132.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HNA9_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 2.760e-8 Identity = 83/394 (21.07%), Postives = 148/394 (37.56%), Query Frame = 1
Query: 70 FVWTHGTYQSHTLTTKHGEVPPLEGWARMWTDPLDT--EVRLVLPEGLELSSLFYFWLSSTLSRYLGAEVTMEEREIFRENVFGLSLSATGLSEVSGKPSSWEAYEAADKKRPVF-HTLPGARGTAFFGWKWGAFSAFMDARARVLESDSWEGGESLVHVPGGEVALSWAGTLERFLAEFCHGRGLGILHPNLNGDVSFARQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLSQSQTAHTPTPTLRGTEDGGGREPE-----ELVLTYRDAHNVVVKYPSVSSVSAYDLLSRRHRDLTHLRLQAYRFFQRLR--ASAERNKDLEDLWKR-------PGVPKPNYGLAKFLIYQPQFGMGNQLRALDAALAVARVLGRVLVVPDYMADNG 1200
F W+HG + + V ++ W P D E ++L + +E+S FY++ S L A+ ++ GLS +E+ P+ +D P+F LP + G +F W W F + R + GG + +P G + SW + +R+ E+ RGL +L+PN + S A + + P L D + + + ++ +R + +K+ + D+++ HR + ++ Y +S R + L+ + G P K+ +Y PQ G+ NQ+ L A+ +A+ LGR LVVP +AD+G
Sbjct: 223 FRWSHGP--PPRINLRKERVGLMDNIVESWDPPEDEACEFAILLEDDIEVSPHFYYYAKSLLVNSKYADDA---------DLVGLSFYTPKWNEIK-YPNVGFKVPTSD---PLFLMQLPCSWGAVYFPWHWREFRKYFAERRNF---EKGVGGIDVPPLPEGARSNSWERSWKRYYIEYMFYRGLLMLYPNFQKEKSLAT------------------------------------THRELGEHTGPNLNKGRDKLTKAKDWERYIQSLVAFRSELDKQLKFSDPPRLKEMDVVNLYHRPASREEIKRYATITSFGNISSNTRREYLDKVHGEGFCALDVSGQRVPQSSGKKYFLYDPQNGLSNQIMQLQGAVVMAQQLGRTLVVPPVVADDG 562
BLAST of mRNA_E_fasciculatus_S2_contig6995.15132.1 vs.
Match: Uncharacterized (protein n=1 Tax=Paramicrosporidium saccamoebae TaxID=1246581 RepID=A0A2H9TQV8_9FUNG) HSP 1 Score: 65.9 bits (159), Expect = 7.470e-8 Identity = 82/369 (22.22%), Postives = 130/369 (35.23%), Query Frame = 1
Query: 157 WTDPLDTEVRLVLPEGLELSSLFYFWLSSTLSRYLGAEVTMEEREIFRENVFGLSLSATGLSEVSGKPSSW-EAYEAADKKRPVFHTLPGARGTAFFGWKWGAFSAFMDARARVLESDSWEGGESLVHVPGGEVALSWAGTLERFLAEFCHGRGLGILHPNLNGDVSFARQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLSQSQTAHTPTPTLRGTEDGGGREPEELV-------LTY--------RDAHNVVVKYPSVSSVSAYDLLSRRHRDLTHLRLQAYRFFQRLRASAERNKDLEDLWKRPG-----VPKPNYG---LAKFLIYQPQFGMGNQLRALDAALAVARVLGRVLVVPDYMA 1191
W D E + +E++ F+ + L +Y+ + + + E FG+SL +E++ KP W + E ++ LP + G W W F F R SD + +P V W + ++FL EF + RGL +L+P L +SF+ H P E GR E LV L Y +DA V + +S ++S H + ++ + + D P + P +G +FLIY+PQ +G+QL AL A A A +L R LV+P +A
Sbjct: 125 WEARSDDEFAFFFEDDIEVAPRFFEYSVIALEKYILPGGQLANQTVLTERFFGISLVTPRYNEIAMKPVDWIPSQEIGMEESQFLFQLPSSWGALLIPWFWRQFLQFYRWRRDKDGSDLKQS------IPDSAVRY-WRRSWKKFLIEFMYMRGLYMLYPALERQISFS------------------------------------------THHREPG----EHTKGRPEEHLVDELGTIKLNYFTVPLALEKDAQQVDRMIAEMKPLSQLPIVSFHHERVQNVHALTQLGLFTVEVMEKHGWDHSKYRVNPTCVLDTITFPVHGQEETERFLIYEPQLSLGHQLNALQNAAAYAAILNRTLVLPPLVA 440
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6995.15132.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 5
| Match Name | E-value | Identity | Description | |
| Uncharacterized | 2.590e-219 | 84.52 | protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... | [more] |
| Uncharacterized | 1.140e-156 | 80.18 | protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... | [more] |
| Uncharacterized | 2.390e-9 | 21.16 | protein n=2 Tax=Rozella allomycis (strain CSF55) T... | [more] |
| Hypothetical | 2.760e-8 | 21.07 | protein (Fragment) n=1 Tax=Odontella aurita TaxID=... | [more] |
| Uncharacterized | 7.470e-8 | 22.22 | protein n=1 Tax=Paramicrosporidium saccamoebae Tax... | [more] |
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Viridiplantae |
| Stop | 0 |
| Start | 0 |
| Seed ortholog score | 61.6 |
| Seed ortholog evalue | 9.7e-07 |
| Seed eggNOG ortholog | 4641.GSMUA_Achr2P02840_001 |
| Model size | 1218 |
| Hectar predicted targeting category | signal peptide |
| Exons | 7 |
| EggNOG OGs | 2CMCB@1,2QPYF@2759,37MZ0@33090,3GCYF@35493,3KS5K@4447 |
| Cds size | 1218 |
| Best tax level | Liliopsida |
| Best eggNOG OG | NA|NA|NA |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1696842356.6829817-CDS-E_fasciculatus_S2_contig6995:365..500 | 1696842356.6829817-CDS-E_fasciculatus_S2_contig6995:365..500 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6995 366..500 - |
| 1696842356.6939397-CDS-E_fasciculatus_S2_contig6995:1945..2143 | 1696842356.6939397-CDS-E_fasciculatus_S2_contig6995:1945..2143 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6995 1946..2143 - |
| 1696842356.723889-CDS-E_fasciculatus_S2_contig6995:2800..3169 | 1696842356.723889-CDS-E_fasciculatus_S2_contig6995:2800..3169 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6995 2801..3169 - |
| 1696842356.7394412-CDS-E_fasciculatus_S2_contig6995:4165..4228 | 1696842356.7394412-CDS-E_fasciculatus_S2_contig6995:4165..4228 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6995 4166..4228 - |
| 1696842356.7525322-CDS-E_fasciculatus_S2_contig6995:5258..5366 | 1696842356.7525322-CDS-E_fasciculatus_S2_contig6995:5258..5366 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6995 5259..5366 - |
| 1696842356.7627916-CDS-E_fasciculatus_S2_contig6995:6438..6603 | 1696842356.7627916-CDS-E_fasciculatus_S2_contig6995:6438..6603 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6995 6439..6603 - |
| 1696842356.774025-CDS-E_fasciculatus_S2_contig6995:7661..7841 | 1696842356.774025-CDS-E_fasciculatus_S2_contig6995:7661..7841 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6995 7662..7841 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig6995.15132.1 >prot_E_fasciculatus_S2_contig6995.15132.1 ID=prot_E_fasciculatus_S2_contig6995.15132.1|Name=mRNA_E_fasciculatus_S2_contig6995.15132.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=406bp
AKLALHVWALTAHAREVMPAQDGFVWTHGTYQSHTLTTKHGEVPPLEGWA RMWTDPLDTEVRLVLPEGLELSSLFYFWLSSTLSRYLGAEVTMEEREIFR ENVFGLSLSATGLSEVSGKPSSWEAYEAADKKRPVFHTLPGARGTAFFGW KWGAFSAFMDARARVLESDSWEGGESLVHVPGGEVALSWAGTLERFLAEF CHGRGLGILHPNLNGDVSFARQAPPSSSSSSSSSSSSSSGSSAGGKGWLE EEETLLLSQSQTAHTPTPTLRGTEDGGGREPEELVLTYRDAHNVVVKYPS VSSVSAYDLLSRRHRDLTHLRLQAYRFFQRLRASAERNKDLEDLWKRPGV PKPNYGLAKFLIYQPQFGMGNQLRALDAALAVARVLGRVLVVPDYMADNG EGESRR back to topmRNA from alignment at E_fasciculatus_S2_contig6995:366..7841- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig6995.15132.1 ID=mRNA_E_fasciculatus_S2_contig6995.15132.1|Name=mRNA_E_fasciculatus_S2_contig6995.15132.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=7476bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6995:366..7841- (Ectocarpus fasciculatus EfasUO2) GCCAAGCTCGCGCTTCACGTCTGGGCGCTCACGGCGCACGCGCGGGAGGT
GATGCCGGCCCAGGATGGCTTCGTGTGGACGCACGGCACGTACCAGTCCC
ACACGCTCACGACGAAGCACGGCGAGGTGCCTCCGCTGGAAGGGTGGGCG
AGAATGTGGACGGACCCGTTAGACACGGAGGTGAGGAACATGGCGGTCGT
GCTGACACGGGGGGGGGGGGGGGGGGGGGCTACTCTTGCGTGTTGGGAGA
TGGGAAGGGCGTGGGGGAGGGAAAGAGGGGAGGGCTTGGGGGTGCCCCCG
GGGGGAGGGGGGGGGGGAAGAGGGAAGGCGCCGTGTAGCCCGGGGGGGGG
GGAATGGGGGGGGGGGGTGGACGGGGGGGGGGGGGGGGGGGGGGGGGCTA
CTCTTGCGTGTTGCGTGCCTTAGCGGTTAGGCCATTGACCGTGCGTCCTC
GAGAGGACGGAGCATTGTTCCCACAGGACCGATCACCAATGACCAATCAT
TCCTTCCTGCTTTGCCAAAGTAACACCGGGCGGGGGGAGGCGGGGGGTGT
AGCCTTGCATGCCGTAGTCGTCAGTTGGACCGTTTGCCTCACATCCCTAG
AGAACCTGTGCGGAGCACGCCGGGTTTTCGCCGGACCAGGCTAAAAAAGC
ACATCATCAAGCGCGAAACGCCGTAGGGGATGGTGTACCAACTCACGCAT
GCCGTAGTCGTTAGGTCATTGGCGTCGCGGCCGGGACGGCGCGATGTAGG
GAGGGGTCTTTGGTGCTTGTCTTTACCGTGCAACAACGCTGCTCGCGGGG
GGGGCACTTCTGCTGTACTATATTTTGTTGTTCTTCCTCTGGTTTTGGTT
TGCGCGCTACAGTACAGCGAGCAGTCGCCGTAGGTCCAAACTGTACGAAA
AAGAATTTTGCTTGGCACGTCTTTACGGCTCTCGACATGGCTCTCTCTCG
GTTCTCTGTGCCGGAAACACGTGGTCTTGTCCTTGTCCTTGCCTCGCCCG
TGCAATCGCGATGTGTGTTGCTTGCTGCCTGTCTGTCGTGAGGAACGGCG
TAGAAGGAATCGCCTGCCTGGCGCGAACGACAAGACCAAAAAAGAAAAAA
ACGCCACCCTCCCCACAAAAAAAAAGAAAACGCACGAAACCCACACGGCT
CGTTAACCCCGCCTTCATACTCACCCATGCATCACCCACCCACCCTTCCG
GCCACCGCCGCCGCCGCCGTGCCGCCTTTGTCTTGTAGGTTCGGTTGGTG
CTGCCGGAGGGGCTGGAGCTGTCGAGCCTGTTCTACTTTTGGCTATCGAG
CACGCTGTCGAGGTACCTGGGTGCGGAGGTGACGATGGAGGAGCGGGAGA
TCTTCCGAGAGAACGTGTTCGGGTTGTCCCTCTCCGCGACCGGGTTGTCG
GAGGTGAGGGAAGACAGAGAAGGAAAGGGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAAGTGGGAGCGAAAGGAAGACAGAGGAAG
AGAGAGAGACAGGGTGAGAGAGAGACCGAGAGAGAGAGACTCCTTCGACC
CTTCGATCAAATGAGAAGATTTGTTGCTGGAGAGGAAACTAAATTTGCTG
TTATTTTGTTTGTAGTAGTGTGCGCAGGTTTAGGTCCCCGAACATGATGT
TTCCATATGAGACCTTCCGTGGGGACGGGGGGGATGCTGACCGCTGCTGC
TGCTGCTGCTGCTGCTGCTGTTGTTGTGTGGTGCCTTTGGTGTTGTTGTT
GTTGTTGTTGTTGTTGTTGTTGTTTTTTCTGTCAGGACGATGCGTGCGAA
GCACTGCAGTAAGTGATAGCTTAAAGCCTACGTGTTGTCATTTACATCCC
CCTCAGGAAGACCAGACATGTATCTACTTGTACCAGGGCTGTGTGTGTGG
GTTCCTTGGATCGGCACGACGAGAGCGCAGATCAACAAGCAGACGAGATT
GAGGGTAGTGTTTGTCCCCGTTGCCTCAGGCAAAAAAAAAACTCCCCAAC
TCGAAACAAGAAGGCCGCAGAAATGGTGCCATGGTGCATGCAACCCGTGC
GTTCGTTCGCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGTTGTTGTTGCGGCCTCG
GCTGCCTGCACCACCTGAAGCCGGTTTGCATGATTTTTTGGTTCGATGTT
TTGTGGTGGTCGTGGTGGTGCCACACACGCACACATTTTTTCTGTGTTTC
AGCTGCATTTAGTCTTGCATTTTTTTCATTGGTCAGCCGGTTACCGCGGT
CGATGCTAACAAAAAAAAAACACACACACACACACACACAATATTGTACA
CACGCTCAATTTTTTTCTGTTTTCGACCGGACCGAAACTGGGTCATTTTC
TTCGGTCAGCCGGTTAGGGTGGTATTGCTATTAAATACTAATTCAACACA
ACCCCAAAACAAAACACCCGCACAGGTTTCGGGCAAGCCCTCGTCGTGGG
AAGCGTACGAGGCCGCGGACAAGAAACGGCCTGTGTTCCACACTCTCCCC
GGGGCCAGAGGGACCGCCTTCTTTGGCTGGAAGGTAAGGGGGGGGGTAGG
GGGGGCGTGGTACACGAGTTGAGGCCCAGGTGCAAAGGGGGGGGGGGGGG
GGGTGGTTGGGGGCCCGGGGGGGGGGGTTAGGGGGCGGAGCAGAAAATTT
AAAGTGGAAGAGCAACCGTATAAACACAAACCNNNNNNNNNNTGTTTTTC
TACCTGGTGGGTGTGGGTTGGGGGTTGGGGGGGGGGGGGGGGGGGGGGGT
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTGT
TAGGCGTCCGAGTGCTGGTGTTAAGGTGCTGAGCAGATATCTTGGCGGGT
TTTAAGGCGAAGACGATGGCGACGACGACAAAAATGAAAAGGTGGCGGGC
TGGTGTTCGTACTATACCCCCCCACCTGGAACCTGAGTGCCCCGGTCGTC
TGTCCCGCCGCCGCCGCCACCGCCGGATGAAGTTGTGGTGGGGCGTGGGA
GGCTTGGCTTGTTTGCCGCAGCTCGTGTGCACACGCATATCCCGCCACAA
GAGTGGGTGTTTTCGTCGGCTAGCCGGTTAGCGCGGTCGATGCTAGTTAA
GAAAACACACGCAGAGAGAGAGGGGGGGGGGGGGTTACACGTGTAGAGGT
GTGATTTTTTTTGTTGGTTTGGCTTGGAGTGTGCCTCCCATGCCCTGCCA
TCGACTTGTGGTTGCGTTCTATCTTGATCCGAGAGAGGAAGCTAGGAGGA
GGAGAGAAGGAGGCACGGAAAAGAAACAGGAGAGATTTCGTAATGCACAC
CCAACAACAATGCCCGCAACGACGACTTCGACGAAGGCGACTAGTGATGG
GACAATCCTCGGCCCTGCAAGGCACGATCGTTGTAGCAGCAAACTTGGCC
GCATAACGTCATCAGGCCACCATGAACTCTTCCACCTCTCCGCGCGCTTG
TTCGTGACCATGACGTCTTCCCTTATTTCCCTCTGTGCTGTTCGCGGTAA
AAAAACACCGGGATCGCGATGGCGCTGCTGGTCGGTGTTGCTTTTTTTCG
TTTTGGCGCAAAGTGGGGAGCCTTCTCCGCATTCATGGACGCCCGAGCCA
GAGTGCTGGAGTCTGATTCGTGGGAGGTGAGAAAAAAAAAAAGAAGACAC
CCGCAGGGCCACTTGTCGGTGTCCATCCTCTTCGTAGCTGTATGTTTGCA
AGAGGAGCGGAAGCTACGTACGTACGCACAAATGCGTGAGGCAGGCAAGG
AGTGCGCTTGATCATCGGAGGCTTTGTCAGGATTCAGAGTCCGGCCTCTG
CCGGCCATCCACGGTGATGGTGCTGTCTGTGTTTCGTGTTGTCGTCCTGC
GATAGATTGCCATCGCAAACAGACGTGACGAAGCAGCAGCAAACAAATCG
CGGCCAAATTTTACGGCGACTGATTCACACGCGTCATTGTTTGTGCCCCC
TTTTTTCTCTTTGCCGTGTCCAAGCGGAGTACAACCACGGCTTGGGGTCT
TAACGTACACGCGAACGAAATATTGCCAGCGTACGTAAGCCGTCGATACG
AAGTTTGTCTGCGCGGAAGTCGAGGCTGTTACGAGGGAAATCGTCTCTCT
CCGGGCGGTTGTAATCTAACACACGACAATCCGCCAAACTGTTATCCGCA
TGCAAATAGAATGCCTTGAGAGCTGAAAATGCTCCTCTGGGGCGGTGGCG
GGAGTCGGCTTCGGCGTTTCGGCCTTGGTCCTAGCCGTCAGCATAGCCTG
GGTTTTTCTGCCGCCAAACCTCCCCCTGCGTCTGTTCGGCATACGAATGA
ACCCCGTGATCGTCGAATACCGCGTTCCGGCGCTCACCATCCAACCCCCA
GTGTCAAAGAAAAAAGAAGAAAGGCGGCGAAGGAGGAGTCCTCATCGTTT
CGCTCGACCCATGGCTTTCCATCTCAGAAGCCCATGCATGCATGACTTCA
CCCACACACCCACACCCAACAACGACGAAGGCAAGCCACTACGTGAGCAT
GCCCCCCCCCCGCCCAAAACCACCAACACCCGCTTACCCTCACACTCGGC
CTTTCACTGCTACCTCCTCCATCGCTGCTGCTACTGCTACTGCCACGCTA
CTGCTGCTGCTGCTATCGACAGGGAGGCGAGTCGCTGGTACACGTCCCGG
GGGGTGAGGTGGCGCTTTCTTGGGCCGGGACCCTCGAGCGGTTCCTGGCA
GAGTTTTGCCACGGCAGGGGCCTCGGCATCCTCCACCCGAACCTCAACGG
GGACGTGAGCTTCGCCCGGCAGGCGCCGCCATCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCTTCCTCCGGTAGCAGCGCGGGGGGAAAAGGGTGG
CTGGAGGAGGAGGAAACTCTGCTGCTGTCGCAGTCGCAGACGGCACACAC
GCCGACGCCGACTCTGAGGGGGACGGAGGACGGGGGGGGGCGGGAGCCGG
AGGAGCTCGTATTGACGTACCGGGACGCTCATAACGTGGTTGTGAGTCGC
GTGTTGCGGTTACTTTTTTTTTCGGTCTGATGTATCGAAAGCGTTGCGCG
TGCGCTGCGTCCGGAGCAAGCGTTGGCGCGCGCGGCTCGCCGCTGTAGCG
TACGATTGTCATTCTGTGCAAAAGGGGGGTTAAGCGTGCTTGTTTGTTGT
GTGTAGCGCTCCGCGCGGGCGTGCGTAAGTAAGGGCAGTGAATGGCCTGG
ATTCTTCAGGCCGTCATGGCCCCGACACCCGTAGCTGGGGGAGTTTCGCA
GCACGCCAGTCAAAGTCTCGACTGCACGTTCTCGATATTGTAGGAGACGC
CGGCATTTGAGGTGCGTTTCGTTCGGTGTCCTGTGGATAAATGCTCTCTC
CGGTTTGACGTGAGCCTTCTCCCTATGTCCTTCAATGGCCTCTCGACCGC
TCTCTTGCCCTTCACGAACCTCTCACTCTTTTTTTTGTCTTCAATCTGAG
GCCGTGTTTAGTGTCTTGTTGTCGACCTAAATGGTTATTTTCATAACAAT
GCTTTCTGCGACGTGACGTGATATTTCCCCTCCCTCATCTCTTATCCCTT
CACCAACTTCACCAACCTCTCATTTCTCTTTTTTTTCAAACTAAGGCCGC
TTTCTCGTTTTGTCTTGTCGACCCTTATATAATTTGTTTTTTGGTCAGGT
AAAATACCCATCTGTGTCCTCCGTGTCAGCGTACGACCTCCTGTCCCGGA
GACATCGGGACCTGACGCACCTGCGGCTCCAAGCGTACCGCTTCTTCCAG
CGCTTGCGGGCCTCGGCCGAGAGGAACAAGGACCTCGAGGACTTGTGGAA
AAGGCCCGGGGTGCCGAAGCCGAACTACGGGCTCGCCAAGTTCCTGGTGA
GCGAGGGAGACCGGAAACTCACTACAGTCGTGGTCGCGCGGCATAGTGAC
AAGCAAAAGCGTGCCGCGGTACAGTACATATGTCGGGACACCGCACTATT
GAGTGTCGGGGGAACATATATCGTAGCCAAGATCCCGTGACAGCGTTATC
CTTCGGGCCGCAGGCCCTTTGCGCGGCAACCGCCGCCAAGCCGCAGGCGT
GCGCGGCAGTTCAGCCCCCCGCGTAGCCGCCGGAGGCAAAATTTTTAGAT
TTCAGCCATTTTTTGCGGGAAATCTTTCGAAAAAATCAAGAATAACACGA
AAAACGATGAAACGCAGATGTAGAGGGGAAAAGGTGTACGTATATATTTA
GAGTTGTGTAAGACCGGGCAGTACTTCCCTTACTTTTGTACTCCTTCTCG
TTGCTTTTACAAAGAAAAACACCCCCACACACAAGCAACAATATAAGAAA
AGACCCCCCAATTTTTTTCTCGCCTGCGGCGAGAAAAATTGCCGCGCACG
CGCTTTTTCATATTACCCGGCAAAAATGCACGATGCCGCGCTGCCGCGCC
CCATTAAGATAACGCTGTCCCGTGACGAGCGGTTGTTTCCCCGGTATGTC
GGGACCACGACGACTGGATTAGATTAGATTAGATTAGATGACAGCTGCTG
TTAACGTTAACGTGCTCTTGGTTGTTGTGTGTTGAGGTGGTGCTCACGGT
GGTGGTTGTCCTGGCCTGACAAGGCAAACACATCCCCTTTAGACCGCCTG
TGGTTATATCTCGAACGGAATTGGACGTAGATTTTCTAGAAACGGAATTT
CGGTGTTTCCCCAGGCAGTTCATATCTTTTTGTATTTCCACAAGTGAGCC
GAGGACTTATTTCTTCTAGCGCGAAGAGCGCCAGCTGGAGAATAGCGCGA
TTCACCCAGCTTTACACACACACCCTAATAGTAAGAACACACACCCACAT
GTGGTGAGATGTTGGTGAGCAAACAAGTGGCTCGTGTGCGGCATGACAGA
GAGAGATGCGACTCATGCGAGACCAACCTCTGCTCTCGTGTCGTATCGGA
GGTGATTTTCCGGGCACCGTCCGCAGCCTACCCTTTTCTTTTTTTGTTCA
CGTAGTTTACCCTTGGAATTCAGAGAAGCATAAGTGTGTGTCTGTCGATT
GTGTATCGTTAGCAGTGTGGCATTACAAAAGAATGGGCAAAATGGATCGA
GAGTAAATGTGGATGCGGGGTGTGGGGTGGCTGCGTTCGCCAGCGGCGGT
AGTCTTCGGTTTGCTAGCTGGGTCCCTCTGACCACCCGATGTTCTTCTTG
GCTGTGTGTGTTAAAAGACCATCTGAGGAATTGCCAACCGTCAAACTTTG
CCACCATACTGACAGCCGTAGTGCAATCGTGCTGCTGCTGCTGCTGTTGT
TGCTACTGTTGCTGCTGCCCCCCCACCGCTCCCGGCCGTAGATCTACCAA
CCACAGTTTGGTATGGGCAACCAGCTTCGAGCGTTGGACGCGGCGTTAGC
GGTTGCGAGGGTGCTTGGCCGGGTGCTGGTGGTGCCCGATTACATGGCCG
ATAATGGAGAAGGTGAAAGCCGGCGC back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig6995:366..7841- >mRNA_E_fasciculatus_S2_contig6995.15132.1 ID=mRNA_E_fasciculatus_S2_contig6995.15132.1|Name=mRNA_E_fasciculatus_S2_contig6995.15132.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1218bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6995:366..7841- (Ectocarpus fasciculatus EfasUO2) GCCAAGCTCGCGCTTCACGTCTGGGCGCTCACGGCGCACGCGCGGGAGGT GATGCCGGCCCAGGATGGCTTCGTGTGGACGCACGGCACGTACCAGTCCC ACACGCTCACGACGAAGCACGGCGAGGTGCCTCCGCTGGAAGGGTGGGCG AGAATGTGGACGGACCCGTTAGACACGGAGGTTCGGTTGGTGCTGCCGGA GGGGCTGGAGCTGTCGAGCCTGTTCTACTTTTGGCTATCGAGCACGCTGT CGAGGTACCTGGGTGCGGAGGTGACGATGGAGGAGCGGGAGATCTTCCGA GAGAACGTGTTCGGGTTGTCCCTCTCCGCGACCGGGTTGTCGGAGGTTTC GGGCAAGCCCTCGTCGTGGGAAGCGTACGAGGCCGCGGACAAGAAACGGC CTGTGTTCCACACTCTCCCCGGGGCCAGAGGGACCGCCTTCTTTGGCTGG AAGTGGGGAGCCTTCTCCGCATTCATGGACGCCCGAGCCAGAGTGCTGGA GTCTGATTCGTGGGAGGGAGGCGAGTCGCTGGTACACGTCCCGGGGGGTG AGGTGGCGCTTTCTTGGGCCGGGACCCTCGAGCGGTTCCTGGCAGAGTTT TGCCACGGCAGGGGCCTCGGCATCCTCCACCCGAACCTCAACGGGGACGT GAGCTTCGCCCGGCAGGCGCCGCCATCCTCCTCCTCCTCCTCCTCCTCCT CCTCCTCCTCTTCCTCCGGTAGCAGCGCGGGGGGAAAAGGGTGGCTGGAG GAGGAGGAAACTCTGCTGCTGTCGCAGTCGCAGACGGCACACACGCCGAC GCCGACTCTGAGGGGGACGGAGGACGGGGGGGGGCGGGAGCCGGAGGAGC TCGTATTGACGTACCGGGACGCTCATAACGTGGTTGTAAAATACCCATCT GTGTCCTCCGTGTCAGCGTACGACCTCCTGTCCCGGAGACATCGGGACCT GACGCACCTGCGGCTCCAAGCGTACCGCTTCTTCCAGCGCTTGCGGGCCT CGGCCGAGAGGAACAAGGACCTCGAGGACTTGTGGAAAAGGCCCGGGGTG CCGAAGCCGAACTACGGGCTCGCCAAGTTCCTGATCTACCAACCACAGTT TGGTATGGGCAACCAGCTTCGAGCGTTGGACGCGGCGTTAGCGGTTGCGA GGGTGCTTGGCCGGGTGCTGGTGGTGCCCGATTACATGGCCGATAATGGA GAAGGTGAAAGCCGGCGC back to top
|