prot_E_fasciculatus_S2_contig6855.14986.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6855.14986.1
Unique Nameprot_E_fasciculatus_S2_contig6855.14986.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length537
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6855.14986.1 vs. uniprot
Match: D7FHZ3_ECTSI (DNA-directed RNA polymerase subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ3_ECTSI)

HSP 1 Score: 1076 bits (2782), Expect = 0.000e+0
Identity = 532/538 (98.88%), Postives = 535/538 (99.44%), Query Frame = 0
Query:    1 MSTNHVYCFKKRQPSKFTWTSEIRSFVDNSGRPPSSMFLQMYAKGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQATPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAA-MCRPLFVVENNRLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVR 537
            MSTNHVYCFKKRQPSKFTWTSEIRSFVDNSGRPPSSMFLQMYAKG+QHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQA PRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDA  +CRPLFVVENNRLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQ+R
Sbjct:  294 MSTNHVYCFKKRQPSKFTWTSEIRSFVDNSGRPPSSMFLQMYAKGTQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLR 831          
BLAST of mRNA_E_fasciculatus_S2_contig6855.14986.1 vs. uniprot
Match: A0A835YQ41_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ41_9STRA)

HSP 1 Score: 853 bits (2203), Expect = 4.760e-299
Identity = 416/540 (77.04%), Postives = 463/540 (85.74%), Query Frame = 0
Query:    1 MSTNHVYCFKKRQPSKFTWTSEIRSFVDNSGRPPSSMFLQMYAKGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQATPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAA-MCRPLFVVENNRLRIRKKHINDL--HDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVR 537
            MS NHVYCF+K+QPSKF W  E RS V+   RP S+M+LQMY KG +HS++ GG IR  LPY+RTDVP+VL+FRALG+ NDK ILEHIVYDFSD +MMEKFRPSLEEADVIQ++ +A DFIGKRGSA NVGRNERI YAKGLLQ+E LPHVG    +E KK FFLGY+VHKLLMCSLGRLEEDDRDHYGKKRLDLAG L+AGLFR              Q CLD+G  FV+G AIKS  IT+GL+YSLATGNWGD+KTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQA PRQLHNTHWG ICPAETPEGQAVGLVKNLALMAYISVGC+LSPILEFLEEWA ENL+EI+P  IA+  CTK+FVNGNW+G+HR+PN+LV+TLV QRR LDID EVSVVRDIK RELRLYTDA  +CRPLFVV+NN+L IRK HI+DL  +   Y WT+LMQ GVVEY+DTEEEETTM+AM+P DL   GGYS+TYTHCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMG+YASNYQVR
Sbjct:  205 MSNNHVYCFRKKQPSKFHWVCETRSHVEGGTRPTSTMYLQMYVKGPKHSQIAGGQIRTTLPYVRTDVPIVLIFRALGFVNDKTILEHIVYDFSDAEMMEKFRPSLEEADVIQSRTLALDFIGKRGSAANVGRNERIQYAKGLLQKEVLPHVGTDEASETKKGFFLGYVVHKLLMCSLGRLEEDDRDHYGKKRLDLAGPLVAGLFRTXXXXXXXXXXXXXQKCLDEGRGFVLGVAIKSNTITNGLRYSLATGNWGDQKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGCALSPILEFLEEWATENLEEISPSTIAEKQCTKIFVNGNWIGIHREPNQLVRTLVIQRRCLDIDAEVSVVRDIKERELRLYTDAGRICRPLFVVQNNKLVIRKSHIHDLVSNPEEYNWTSLMQAGVVEYVDTEEEETTMIAMDPSDLAAGGGYSTTYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGVYASNYQVR 744          
BLAST of mRNA_E_fasciculatus_S2_contig6855.14986.1 vs. uniprot
Match: F0YIN3_AURAN (DNA-directed RNA polymerase subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIN3_AURAN)

HSP 1 Score: 766 bits (1979), Expect = 7.940e-266
Identity = 374/541 (69.13%), Postives = 443/541 (81.89%), Query Frame = 0
Query:    1 MSTNHVYCFKKRQPSKFTWTSEIRSFVDNSGRPPSSMFLQMYAKGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQATPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAA-MCRPLFVVEN---NRLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVR 537
            MS NHVYCF+K+QP K++W  E RS V++  RP S++++QMY K  +  +  G  IR  LPYIR DVPV++VFRALG+  D+ ILEH+VYDFSDT+MME+ RPSL+EA V+QNQ +A DFIG+RGSA N+GR++R+ YAK LLQ+E LPHVG    ++ KK FF+GY+VHKLLMCSL R++EDDRDHYGKKRLDLAG LL GLFR LFRKLT++V  YLQ C+D+G  F + +AIKS+ ITDGL+YSLATGNWGD+K A++AGVSQVLNRLTYAS LSHLRRLNTPLGREGKQA PRQLHNTHWGFICPAETPEGQAVGLVKNLALM+Y+SVG   SPILEFLEEW+MENL+EI+P  IA    TK+FVNG+WVGVHRDP+ L  TL   RR +DID EVSVVRDIK +ELR+YTDA  +CRPL ++       LR+RK HI  L +   GWT L+ +G+VE +DTEEEETTM+AM P DL E+  YSSTYTHCEIHPSMILG+C SIIPFPDHNQSPRNTYQSAMGKQAMGIYASN+Q R
Sbjct:  153 MSNNHVYCFRKKQPHKYSWVVECRSHVEHGARPTSTIYMQMYNKAGR-GQSQGNQIRMTLPYIRVDVPVIIVFRALGFVADRDILEHVVYDFSDTEMMEQLRPSLDEAFVVQNQTIALDFIGRRGSATNIGRSKRVQYAKELLQKEVLPHVGTEEQSDTKKAFFVGYIVHKLLMCSLERIDEDDRDHYGKKRLDLAGPLLGGLFRMLFRKLTKDVLAYLQKCIDEGRDFNLASAIKSRVITDGLRYSLATGNWGDRKDASRAGVSQVLNRLTYASTLSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMSYVSVGSPQSPILEFLEEWSMENLEEISPQTIADPGTTKIFVNGSWVGVHRDPSTLESTLRSLRRQIDIDPEVSVVRDIKEKELRIYTDAGRVCRPLLIISKFSRQELRLRKSHIQKLVNGELGWTQLLVKGLVELVDTEEEETTMIAMVPSDLNET--YSSTYTHCEIHPSMILGICGSIIPFPDHNQSPRNTYQSAMGKQAMGIYASNFQQR 690          
BLAST of mRNA_E_fasciculatus_S2_contig6855.14986.1 vs. uniprot
Match: F0YGN2_AURAN (DNA-directed RNA polymerase subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGN2_AURAN)

HSP 1 Score: 760 bits (1962), Expect = 3.810e-262
Identity = 374/552 (67.75%), Postives = 442/552 (80.07%), Query Frame = 0
Query:    1 MSTNHVYCFKKRQPSKFTWTSEIRSFVDNSGRPPSSMFLQMYAKGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQATPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAA-MCRPLFVVEN--------------NRLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVR 537
            MS NHVYCF+K+QP K++W  E RS V++  RP S++++QMY K  +  +  G  IR  LPY+R DVPV++VFRALG+  D+ ILEH+VYDFSDT+MME+ RPSL+EA VIQNQ +A DFIG+RGSA N+GR++R+ YAK LLQ+E LPHVG    ++ KK FF+GY+VHKLLMCSL R++EDDRDHYGKKRLDLAG LL GLFR LFRKLT++V  YLQ C+D G  F + +AIKS+ +TDGL+YSLATGNWGD+K A++AGVSQVLNRLTYAS LSHLRRLNTPLGREGKQA PRQLHNTHWGFICPAETPEGQAVGLVKNLALM+Y+SVG   SPILEFLEEW+MENL+EI+P  IA    TK+FVNG+WVGVHRDP+ L  TL   RR +DID EVSVVRDIK +ELR+YTDA  +CRPL +VE                 LR+RK H+  L + + GWT L+ +G+VE IDTEEEET M+AM P DL E   YSSTYTHCEIHPSMILG+C SIIPFPDHNQSPRNTYQSAMGKQAMGIYASN+Q R
Sbjct:  250 MSNNHVYCFRKKQPHKYSWVVECRSHVEHGARPTSTIYMQMYNKAGR-GQSQGNQIRVTLPYVRVDVPVIVVFRALGFVADRDILEHVVYDFSDTEMMERLRPSLDEAFVIQNQTIALDFIGRRGSATNIGRSKRVQYAKELLQKEVLPHVGTEEQSDTKKAFFVGYIVHKLLMCSLERIDEDDRDHYGKKRLDLAGPLLGGLFRMLFRKLTKDVLAYLQKCIDDGRDFNLASAIKSRVVTDGLRYSLATGNWGDRKDASRAGVSQVLNRLTYASTLSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMSYVSVGSPQSPILEFLEEWSMENLEEISPQTIADPGTTKIFVNGSWVGVHRDPSTLESTLRSLRRQIDIDPEVSVVRDIKEKELRVYTDAGRVCRPLLIVEAASTVTRVRSQEATFQELRLRKSHVQKLVNGDLGWTQLLVKGLVELIDTEEEETAMIAMIPSDLNEP--YSSTYTHCEIHPSMILGICGSIIPFPDHNQSPRNTYQSAMGKQAMGIYASNFQQR 798          
BLAST of mRNA_E_fasciculatus_S2_contig6855.14986.1 vs. uniprot
Match: A0A6A4ZKU8_9STRA (DNA-directed RNA polymerase (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZKU8_9STRA)

HSP 1 Score: 746 bits (1926), Expect = 7.450e-262
Identity = 369/541 (68.21%), Postives = 438/541 (80.96%), Query Frame = 0
Query:    1 MSTNHVYCFKKRQPSKFTWTSEIRSFVDNSGRPPSSMFLQMYAKGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQATPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAA-MCRPLFVVENNRLRIRKKHINDLHD---PNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVR 537
            MS NHVYCFKK   SK++W  E RS V+   RP S+M++QMYAK    S V+G  IRA +PYIR D+PVV++FRALG+  D+ ILEHI YDF+D ++ME+F+PSLEEA VIQ Q VA DFIG+RGSAVNV + +R+ YA+ +LQ+E LPHVG+    E KK +FLGY+VHKLLMCSLGRL EDDRDHYG KRLDLAG LL GLFR LF+KLT++V+ YLQ C+D G  F +  AIKS+ I++GL+YSLATGNWG +KTA+KAGVSQVLNRLTYAS+LSHLRRLNTPLGREGKQA PRQLHNTHWG ICPAETPEGQAVGLVKNLALMAYISVG   +PILEFLEEW+ ENL+EI   +I     TK+FVNGNWVGVHR+PN LV+TL   RR +DID EVSV+RD+  +ELR+YTDA  +CRPLF+VENNRL ++K+H+  L +     + W NL+ +GVVE IDTEEEE  M+AMEPKDL  +    S YTHCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMGIY+SN++ R
Sbjct:  156 MSNNHVYCFKKSSISKYSWVCETRSHVERGVRPTSTMYVQMYAKSGGKSAVSGHQIRAVIPYIRQDIPVVIIFRALGFVADREILEHICYDFTDVELMERFKPSLEEAFVIQEQEVALDFIGRRGSAVNVSKADRLRYAQDILQKEMLPHVGVEDHNETKKAYFLGYVVHKLLMCSLGRLGEDDRDHYGNKRLDLAGPLLGGLFRVLFKKLTKDVKGYLQKCVDAGRDFQLSLAIKSKTISNGLRYSLATGNWGMQKTASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWSTENLEEITAQIIP--TATKIFVNGNWVGVHREPNELVKTLRSLRRCVDIDAEVSVIRDLMQKELRIYTDAGRVCRPLFIVENNRLLLQKQHVVKLQNHKHTQFRWQNLLTEGVVELIDTEEEEVCMIAMEPKDLRNA---RSLYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYSSNFRAR 691          
BLAST of mRNA_E_fasciculatus_S2_contig6855.14986.1 vs. uniprot
Match: A0A7S4QFE0_9STRA (DNA-directed RNA polymerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QFE0_9STRA)

HSP 1 Score: 747 bits (1928), Expect = 2.530e-261
Identity = 370/543 (68.14%), Postives = 435/543 (80.11%), Query Frame = 0
Query:    1 MSTNHVYCFKKRQPSKFTWTSEIRSFVDNSGRPPSSMFLQMYAKGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQATPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAA-MCRPLFVVENNRLRIRKKHINDLHD-----PNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVR 537
            MS NHVY FKK+QPSKF+W  E RS V+NS RP S++++QMY KG + + + G  IR+ LPYIRTD+PVV++FRALGY  D+ I+EH+VYD +D +MM+ FRPSLEE+ VIQ Q VA DFIG+RGSA +V +++RI YA G+LQ+E LPHVG     E KK FFLGY VHKLLMC LGR +EDDRDH+GKKRLDLAG LL GLFR LFRKLT++VRK+L+LCLD+   F +G AIKS  I+DGLKYSLATGNWGDK  + KAGVSQVLNRLTYAS LSHLRR NTPL R GKQA PRQLHN+HWG +CPAETPEGQAVGLVKNLALMAYI+ G +  PI+EFLEE++ ENL +I P +IA+    K+FVNGNWVGVHRDP  LV+T    RR +DID EVS+VRDI   E+R+YTDA  +CRPLFVV +  L I+K HI+ L           W +L+ +G+VEYIDTEEEETTM+AMEPKDLE    YSSTYTHCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMGIY+SNYQVR
Sbjct:  169 MSNNHVYAFKKKQPSKFSWVIETRSQVENSTRPTSTLYIQMYHKGGKGA-IEGNQIRSTLPYIRTDIPVVIIFRALGYVADRDIIEHVVYDLTDGEMMDLFRPSLEESFVIQRQEVALDFIGRRGSARDVTKDDRIRYASGILQKEVLPHVGTEEHCETKKGFFLGYAVHKLLMCRLGRSDEDDRDHFGKKRLDLAGPLLGGLFRVLFRKLTKDVRKHLKLCLDQVKMFNIGAAIKSNHISDGLKYSLATGNWGDKGASVKAGVSQVLNRLTYASTLSHLRRCNTPLARTGKQAKPRQLHNSHWGMVCPAETPEGQAVGLVKNLALMAYITTGTAQVPIMEFLEEFSTENLTDILPSVIAEPTTCKIFVNGNWVGVHRDPKALVETFRSLRRMIDIDAEVSIVRDIAESEVRIYTDAGRICRPLFVVTDQDLVIKKHHISQLQGISDDGKRLTWADLLMEGLVEYIDTEEEETTMIAMEPKDLESGDSYSSTYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYSSNYQVR 710          
BLAST of mRNA_E_fasciculatus_S2_contig6855.14986.1 vs. uniprot
Match: A0A8J2SZW4_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZW4_9STRA)

HSP 1 Score: 758 bits (1957), Expect = 2.980e-261
Identity = 372/556 (66.91%), Postives = 444/556 (79.86%), Query Frame = 0
Query:    1 MSTNHVYCFKKRQPSKFTWTSEIRSFVDNSGRPPSSMFLQMYAKGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQATPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAA-MCRPLFVVENN------------------RLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVR 537
            MS NHVYCF+K+QP K++W  E RS V++  RP S++++QMY K  +  +  G  IR  LPY+R D+PV++VFRALG+  D+ ILEH+VYDFSDTDMME+ RPSL+EA V+QNQ +A DFIG+RGSA N+GR++R+ YAK LLQ+E LPHVG    ++ KK FF+GY+VHKLLMCSL R++EDDRDHYGKKRLDLAG LL GLFR LFRKLT++V  YLQ C+D+   F + +AIKS+ ITDGL+YSLATGNWGD+K A++AGVSQVLNRLTYAS LSHLRRLNTPLGREGKQA PRQLHNTHWGFICPAETPEGQAVGLVKNLALMAY+SVG   SPILEFLEEW+MENL+EI+P  IA    TK+FVNG+W+GVHRDP  L  TL   RR +DID EVSVVRDIK +ELR+YTDA  +CRPL +VE++                  +L++RK HI+ L +   GWT L+ +G+VE +DTEEEE TM+AM P DL E   YSSTYTHCEIHPSMILG+C SIIPFPDHNQSPRNTYQSAMGKQAMGIYASN+Q R
Sbjct:  249 MSNNHVYCFRKKQPHKYSWVVECRSHVEHGARPTSTVYMQMYNKAGR-GQSQGNQIRMTLPYVRVDIPVIIVFRALGFVADRDILEHVVYDFSDTDMMERLRPSLDEAFVVQNQTIALDFIGRRGSATNIGRSKRVQYAKELLQKEVLPHVGTEEQSDTKKAFFVGYIVHKLLMCSLERIDEDDRDHYGKKRLDLAGPLLGGLFRMLFRKLTKDVLAYLQKCIDEARDFNLASAIKSRLITDGLRYSLATGNWGDRKDASRAGVSQVLNRLTYASTLSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYVSVGSPQSPILEFLEEWSMENLEEISPQTIADPGTTKIFVNGSWIGVHRDPCTLEATLRSLRRQIDIDPEVSVVRDIKEKELRVYTDAGRVCRPLLIVESDHASTWKDPLNHSSSSPAQKLKLRKPHIHKLVNGELGWTQLLVKGLVELVDTEEEEATMIAMIPSDLNEP--YSSTYTHCEIHPSMILGICGSIIPFPDHNQSPRNTYQSAMGKQAMGIYASNFQQR 801          
BLAST of mRNA_E_fasciculatus_S2_contig6855.14986.1 vs. uniprot
Match: B8C598_THAPS (DNA-directed RNA polymerase subunit beta n=2 Tax=Bacillariophyta TaxID=2836 RepID=B8C598_THAPS)

HSP 1 Score: 751 bits (1940), Expect = 2.620e-259
Identity = 370/545 (67.89%), Postives = 440/545 (80.73%), Query Frame = 0
Query:    1 MSTNHVYCFKKRQPSKFTWTSEIRSFVDNSGRPPSSMFLQMYAKGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQATPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAA-MCRPLFVVENNRLRIRKKHINDLH-----DPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGG--YSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVR 537
            MS NHVY FKK+QPSKF+W  E RS V+NS RP S++++QMY KG + + + G  IR+ LPYIRTD+PVV++FRALGY  D+ I+EH+VYD +D +MM+ FRPSLEEA VIQ Q VA DFIG+RGSA +V +++RI YA G+LQ+E LPHVG     E KK FFLGY VHKLLMC LGR +EDDRDH+GKKRLDLAG LL GLFR LFRKLT++VRK+LQ CLD+G  F +G AIKS  I+DGLKYSLATGNWGDK   +KAGVSQVLNRLTYAS+LSHLRR NTPL R GKQA PRQLHN+HWG +CPAETPEGQAVGLVKN+ALMAYI+ G S  P++EFLEE++ ENL +I P +IA+ N  K+FVNGNWVG+HRDP +LV T    RR +DID EVS+VRDI   E+R+YTDA  +CRPLF+V +  L I+K HI+ L           WT+L+ +G+VEY+DTEEEETTM+AMEPKDL+ + G  YS+TYTHCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVR
Sbjct:  210 MSNNHVYAFKKKQPSKFSWVIETRSQVENSTRPTSTLYIQMYQKGGKGA-IEGNQIRSTLPYIRTDIPVVIIFRALGYVADRDIIEHVVYDLTDGEMMDLFRPSLEEAFVIQKQEVALDFIGRRGSARDVTKDDRIRYAAGILQKEVLPHVGTEEHCETKKGFFLGYAVHKLLMCKLGRADEDDRDHFGKKRLDLAGPLLGGLFRVLFRKLTKDVRKHLQRCLDEGKHFNIGAAIKSNHISDGLKYSLATGNWGDKGNTSKAGVSQVLNRLTYASSLSHLRRSNTPLARTGKQAKPRQLHNSHWGMVCPAETPEGQAVGLVKNMALMAYITTGTSQVPVMEFLEEFSTENLTDILPSVIAEPNTCKIFVNGNWVGIHRDPKQLVHTFRSLRRMIDIDAEVSIVRDIPESEVRIYTDAGRICRPLFIVTDQELAIKKHHISQLQGVSPDQKKLTWTDLLMEGLVEYVDTEEEETTMIAMEPKDLDMTVGEPYSTTYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVR 753          
BLAST of mRNA_E_fasciculatus_S2_contig6855.14986.1 vs. uniprot
Match: A0A1E7ERG7_9STRA (DNA-directed RNA polymerase subunit beta n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A1E7ERG7_9STRA)

HSP 1 Score: 749 bits (1933), Expect = 2.800e-258
Identity = 370/543 (68.14%), Postives = 437/543 (80.48%), Query Frame = 0
Query:    1 MSTNHVYCFKKRQPSKFTWTSEIRSFVDNSGRPPSSMFLQMYAKGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDK-KTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQATPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAA-MCRPLFVVENNRLRIRKKHINDLH----DPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVR 537
            +S NHVY F+K+QPSKF+W  E RS V+NS RP S++++QMY KG + + + G  IR+ LPYIRTDVPVV++FRALGY  D+ I+EH+VYD +D +MM+ FRPSLEEA VIQ Q VA DFIG+RGSA +V +++RI YA  +LQ+E LPHVG+    E KK FF+GY VHKLL C LGR EEDDRDH+GKKRLDLAG LL GLFR LFRKLT +VR++LQ CLD+G  F +G AIKS  +TDGLKYSLATGNWGDK  +A KAGVSQVLNRLTYAS+LSHLRR NTPL R GKQA PRQLHNTHWG +CPAETPEGQAVGLVKNLALMAYI+ G +  P++EFLEE++ ENL +I P ++A+ N  K+FVNGNWVGVHRDP  LV T    RR +DID EVS+VRDI  +E+R+YTDA  +CRPLFVV+  +L I+K+HI  L     +    WT+L+ +G+VEYIDTEEEETTMVAM+P DL     YSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVR
Sbjct:  210 LSNNHVYAFRKKQPSKFSWVIETRSQVENSSRPVSTLYIQMYQKGGRGA-IEGNQIRSTLPYIRTDVPVVVIFRALGYVADRDIIEHVVYDLTDGEMMDMFRPSLEEAFVIQRQEVALDFIGRRGSARDVTKDDRIRYASAILQKEVLPHVGVEEHCETKKGFFIGYAVHKLLSCKLGRAEEDDRDHFGKKRLDLAGPLLGGLFRLLFRKLTLDVRRHLQRCLDEGKHFNIGAAIKSNHVTDGLKYSLATGNWGDKGASAPKAGVSQVLNRLTYASSLSHLRRCNTPLARTGKQAKPRQLHNTHWGMVCPAETPEGQAVGLVKNLALMAYITTGTAQVPVMEFLEEFSTENLTDILPSVVAEPNTCKIFVNGNWVGVHRDPRALVDTFRSLRRMVDIDAEVSIVRDIAAKEVRIYTDAGRICRPLFVVQEQQLVIKKQHIMQLQGLSGEKKLTWTDLLMEGIVEYIDTEEEETTMVAMDPVDLNADESYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVR 751          
BLAST of mRNA_E_fasciculatus_S2_contig6855.14986.1 vs. uniprot
Match: A0A024TRP0_9STRA (DNA-directed RNA polymerase subunit beta n=17 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TRP0_9STRA)

HSP 1 Score: 748 bits (1930), Expect = 5.220e-258
Identity = 369/541 (68.21%), Postives = 439/541 (81.15%), Query Frame = 0
Query:    1 MSTNHVYCFKKRQPSKFTWTSEIRSFVDNSGRPPSSMFLQMYAKGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQATPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAA-MCRPLFVVENNRLRIRKKHINDLHD---PNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVR 537
            MS NHVYCFKK   SK++W  E RS V+   RP S+M++QMYAK    S V+G  IRA +PYIR D+PVV++FRALG+  D+ ILEHI YDF+D ++ME+F+PSLEEA VIQ Q VA DFIG+RGSAVNV + +R+ YA+ +LQ+E LPHVG+    E KK +FLGY+VHKLLMCSLGRL EDDRDHYG KRLDLAG LL GLFR LF+KLT++V+ YLQ C+D G  F +  AIKS+ I++GL+YSLATGNWG +KTA+KAGVSQVLNRLTYAS+LSHLRRLNTPLGREGKQA PRQLHNTHWG ICPAETPEGQAVGLVKNLALMAYISVG   +PILEFLEEW+ ENL+EI   +I     TK+FVNGNWVGVHR+PN LV+TL   RR +DID EVSV+RD+  +ELR+YTDA  +CRPLF+VENNRL ++K+H+  L +    ++ W NL+ +GVVE IDTEEEE  M+AMEPKDL  +    S YTHCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMGIY+SN++ R
Sbjct:  198 MSNNHVYCFKKSSISKYSWVCETRSHVERGARPTSTMYVQMYAKSGGKSAVSGHQIRAVIPYIRQDIPVVIIFRALGFVADREILEHICYDFTDVELMERFKPSLEEAFVIQEQEVALDFIGRRGSAVNVSKADRLRYAQDILQKEMLPHVGVEDHNETKKAYFLGYVVHKLLMCSLGRLGEDDRDHYGNKRLDLAGPLLGGLFRVLFKKLTKDVKGYLQKCVDAGRDFQLSLAIKSKTISNGLRYSLATGNWGMQKTASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWSTENLEEITAQIIP--TATKIFVNGNWVGVHREPNELVKTLRSLRRCVDIDAEVSVIRDLMQKELRIYTDAGRVCRPLFIVENNRLLLQKQHVVKLQNHKHTHFRWQNLLTEGVVELIDTEEEEVCMIAMEPKDLRNA---RSLYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYSSNFRAR 733          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6855.14986.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHZ3_ECTSI0.000e+098.88DNA-directed RNA polymerase subunit beta n=1 Tax=E... [more]
A0A835YQ41_9STRA4.760e-29977.04DNA-directed RNA polymerase subunit beta n=1 Tax=T... [more]
F0YIN3_AURAN7.940e-26669.13DNA-directed RNA polymerase subunit beta n=1 Tax=A... [more]
F0YGN2_AURAN3.810e-26267.75DNA-directed RNA polymerase subunit beta n=1 Tax=A... [more]
A0A6A4ZKU8_9STRA7.450e-26268.21DNA-directed RNA polymerase (Fragment) n=3 Tax=Aph... [more]
A0A7S4QFE0_9STRA2.530e-26168.14DNA-directed RNA polymerase n=1 Tax=Ditylum bright... [more]
A0A8J2SZW4_9STRA2.980e-26166.91DNA-directed RNA polymerase subunit beta n=1 Tax=P... [more]
B8C598_THAPS2.620e-25967.89DNA-directed RNA polymerase subunit beta n=2 Tax=B... [more]
A0A1E7ERG7_9STRA2.800e-25868.14DNA-directed RNA polymerase subunit beta n=6 Tax=B... [more]
A0A024TRP0_9STRA5.220e-25868.21DNA-directed RNA polymerase subunit beta n=17 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007120DNA-directed RNA polymerase, subunit 2, hybrid-binding domainPFAMPF00562RNA_pol_Rpb2_6coord: 501..537
e-value: 6.4E-6
score: 25.5
NoneNo IPR availableGENE3D3.90.1100.10coord: 182..392
e-value: 8.6E-41
score: 142.0
NoneNo IPR availablePANTHERPTHR20856:SF23coord: 1..537
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 1..537
IPR037034RNA polymerase Rpb2, domain 2 superfamilyGENE3D3.90.1110.10coord: 4..181
e-value: 9.4E-67
score: 226.1
IPR007646RNA polymerase Rpb2, domain 4PFAMPF04566RNA_pol_Rpb2_4coord: 367..427
e-value: 3.5E-17
score: 62.4
IPR037033DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamilyGENE3D2.40.270.10coord: 500..537
e-value: 3.8E-14
score: 54.6
IPR007645RNA polymerase Rpb2, domain 3PFAMPF04565RNA_pol_Rpb2_3coord: 266..330
e-value: 2.6E-26
score: 91.6
IPR007647RNA polymerase Rpb2, domain 5PFAMPF04567RNA_pol_Rpb2_5coord: 448..494
e-value: 7.0E-20
score: 71.4
IPR007642RNA polymerase Rpb2, domain 2PFAMPF04561RNA_pol_Rpb2_2coord: 3..194
e-value: 3.2E-44
score: 150.8
IPR015712DNA-directed RNA polymerase, subunit 2PANTHERPTHR20856DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2coord: 1..537

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6855contigE_fasciculatus_S2_contig6855:148..7160 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6855.14986.1mRNA_E_fasciculatus_S2_contig6855.14986.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6855 124..7160 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6855.14986.1 ID=prot_E_fasciculatus_S2_contig6855.14986.1|Name=mRNA_E_fasciculatus_S2_contig6855.14986.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=537bp
MSTNHVYCFKKRQPSKFTWTSEIRSFVDNSGRPPSSMFLQMYAKGSQHSK
VNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEK
FRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPH
VGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALL
AGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLAT
GNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQATPRQLH
NTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMEN
LDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEV
SVVRDIKGRELRLYTDAAMCRPLFVVENNRLRIRKKHINDLHDPNYGWTN
LMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGV
CASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015712DNA-dir_RNA_pol_su2
IPR007642RNA_pol_Rpb2_2
IPR007647RNA_pol_Rpb2_5
IPR007645RNA_pol_Rpb2_3
IPR037033DNA-dir_RNAP_su2_hyb_sf
IPR007646RNA_pol_Rpb2_4
IPR037034RNA_pol_Rpb2_2_sf
IPR007120DNA-dir_RNAP_su2_dom