mRNA_E-fasciculatus_F_contig10699.554.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10699.554.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 123 bits (308), Expect = 1.020e-30 Identity = 55/89 (61.80%), Postives = 71/89 (79.78%), Query Frame = 1
Query: 1 SGEAFDAVCDGCPQASCQDCVFKNDSLVPTCTEVPEHATSSGGSVAMETLSIDRGYWRATPTSTNILACYHADACLGGVTGTAGYCLEG 267
S + F+A+C+GC + +C CVF SL P CTEV +H+TS GG+V ++TLSIDRG+WRA+ +ST +LACYHADACLGGVTG +GYC EG
Sbjct: 1006 SVDHFEAICNGC-ETTCDGCVFAEGSLAPICTEVMDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEG 1093
BLAST of mRNA_E-fasciculatus_F_contig10699.554.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI) HSP 1 Score: 122 bits (307), Expect = 1.390e-30 Identity = 55/89 (61.80%), Postives = 69/89 (77.53%), Query Frame = 1
Query: 1 SGEAFDAVCDGCPQASCQDCVFKNDSLVPTCTEVPEHATSSGGSVAMETLSIDRGYWRATPTSTNILACYHADACLGGVTGTAGYCLEG 267
S + F+ +C GC + +C+ CVF LVP CTEV EHATS GG++ +E LSID GYWRAT +S ++LACYHA+ACLGGVT T+GYCLEG
Sbjct: 1117 SDDPFEVMCSGC-EVTCEGCVFDEGLLVPACTEVMEHATSDGGNITLEALSIDSGYWRATESSEDVLACYHAEACLGGVTATSGYCLEG 1204
BLAST of mRNA_E-fasciculatus_F_contig10699.554.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 122 bits (306), Expect = 1.890e-30 Identity = 57/89 (64.04%), Postives = 69/89 (77.53%), Query Frame = 1
Query: 1 SGEAFDAVCDGCPQASCQDCVFKNDSLVPTCTEVPEHATSSGGSVAMETLSIDRGYWRATPTSTNILACYHADACLGGVTGTAGYCLEG 267
S + F+AVC+GC Q +C C F + LVPTCT++ EH+TSS G +ETLSI GYWRAT + T +LACYHADACLGGVTGT+GYCLEG
Sbjct: 1107 SADLFEAVCNGC-QTACVGCAFADPLLVPTCTDLLEHSTSSDGRDTLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEG 1194
BLAST of mRNA_E-fasciculatus_F_contig10699.554.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 118 bits (295), Expect = 5.770e-29 Identity = 55/84 (65.48%), Postives = 65/84 (77.38%), Query Frame = 1
Query: 13 FDAVCDGCPQASCQDCVFKNDSLVPTCTEVPEHATSSGGSVAMETLSIDRGYWRATPTSTNILACYHADACLGGVTGTAGYCLE 264
F+AVCDGC + +C C F VPTC++V +H TS+GG V +ETLSID GYWRAT +S IL CY+ADACLGGVTGTAGYCLE
Sbjct: 927 FEAVCDGC-RVACDGCSFDEPPAVPTCSDVMDHGTSTGGKVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLE 1009
BLAST of mRNA_E-fasciculatus_F_contig10699.554.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 116 bits (291), Expect = 1.980e-28 Identity = 51/89 (57.30%), Postives = 67/89 (75.28%), Query Frame = 1
Query: 1 SGEAFDAVCDGCPQASCQDCVFKNDSLVPTCTEVPEHATSSGGSVAMETLSIDRGYWRATPTSTNILACYHADACLGGVTGTAGYCLEG 267
SG ++A+CDGCP C+ C F+ LVP C++ EH+ SSGG+V ++ L I+ GYWRATP+S N+L CY+ADACLGGVTG+ YCLEG
Sbjct: 473 SGTLYEAICDGCP-VECEGCSFEEPQLVPKCSDALEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEG 560
BLAST of mRNA_E-fasciculatus_F_contig10699.554.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE) HSP 1 Score: 116 bits (290), Expect = 2.730e-28 Identity = 54/84 (64.29%), Postives = 65/84 (77.38%), Query Frame = 1
Query: 13 FDAVCDGCPQASCQDCVFKNDSLVPTCTEVPEHATSSGGSVAMETLSIDRGYWRATPTSTNILACYHADACLGGVTGTAGYCLE 264
F+AVCDGC + +C C F VPTC++V +H+TS GG+V +ETL ID GYWRAT +S IL CY+ADACLGGVTGTAGYCLE
Sbjct: 987 FEAVCDGC-RVACDGCSFDEQPAVPTCSDVMDHSTSPGGNVTLETLLIDPGYWRATSSSKKILPCYNADACLGGVTGTAGYCLE 1069
BLAST of mRNA_E-fasciculatus_F_contig10699.554.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI) HSP 1 Score: 111 bits (278), Expect = 1.140e-26 Identity = 51/89 (57.30%), Postives = 65/89 (73.03%), Query Frame = 1
Query: 1 SGEAFDAVCDGCPQASCQDCVFKNDSLVPTCTEVPEHATSSGGSVAMETLSIDRGYWRATPTSTNILACYHADACLGGVTGTAGYCLEG 267
SG+ F+AVC GC C CVF+ + P C+EV H+TS+GG+ ++ +SIDRGYWRAT S +L C+ ADACLGGVTGT+GYCLEG
Sbjct: 723 SGDPFEAVCAGC-DIVCDGCVFEQGLVGPACSEVMAHSTSTGGNTTLQEVSIDRGYWRATSVSEEVLECFQADACLGGVTGTSGYCLEG 810
BLAST of mRNA_E-fasciculatus_F_contig10699.554.1 vs. uniprot
Match: A0A6H5JMC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMC1_9PHAE) HSP 1 Score: 109 bits (273), Expect = 5.370e-26 Identity = 54/88 (61.36%), Postives = 65/88 (73.86%), Query Frame = 1
Query: 4 GEAFDAVCDGCPQASCQDCVFKNDSLVPTCTEVPEHATSSGGSVAMETLSIDRGYWRATPTSTNILACYHADACLGGVTGTAGYCLEG 267
G+ + VC GC + C DC ++S VPTCT P+HA S+G +V ETLSIDRGYWRATP+S NILAC++ADACLGG TG A YC EG
Sbjct: 662 GDRYSNVCSGCEE--CNDCDVADNSEVPTCTITPDHAQSTGSTV--ETLSIDRGYWRATPSSRNILACHNADACLGGETGAADYCAEG 745
BLAST of mRNA_E-fasciculatus_F_contig10699.554.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 109 bits (272), Expect = 7.340e-26 Identity = 49/89 (55.06%), Postives = 67/89 (75.28%), Query Frame = 1
Query: 1 SGEAFDAVCDGCPQASCQDCVFKNDSLVPTCTEVPEHATSSGGSVAMETLSIDRGYWRATPTSTNILACYHADACLGGVTGTAGYCLEG 267
SG ++A C GC + +C C F+ + PTCT+V EH TS+GG+V +E L ++RGYWRA+P+S + ACY++DACLGGVTG AGYCL+G
Sbjct: 753 SGNPYEAACGGC-ETACDGCFFE-PPVPPTCTDVMEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKG 839
BLAST of mRNA_E-fasciculatus_F_contig10699.554.1 vs. uniprot
Match: A0A6H5K1P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1P8_9PHAE) HSP 1 Score: 108 bits (270), Expect = 1.370e-25 Identity = 54/86 (62.79%), Postives = 66/86 (76.74%), Query Frame = 1
Query: 13 FDAVCDGCPQASCQDCVFKNDSL-VPTCTEVPEHATSSGGSVAMETLSIDRGYWRATPTSTNILACYHADACLGGVTGTAGYCLEG 267
F+ +C GC + +C+ CV ND L VP CTEV EHATS GG++ +E LSID GYWRAT +S +ILACYH +ACLGGVT T+GY LEG
Sbjct: 851 FEVMCSGC-EVTCKGCV--NDGLLVPACTEVMEHATSDGGNITLEALSIDSGYWRATESSEDILACYHPEACLGGVTATSGYRLEG 933 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10699.554.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10699.554.1 >prot_E-fasciculatus_F_contig10699.554.1 ID=prot_E-fasciculatus_F_contig10699.554.1|Name=mRNA_E-fasciculatus_F_contig10699.554.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=89bp SGEAFDAVCDGCPQASCQDCVFKNDSLVPTCTEVPEHATSSGGSVAMETLback to top mRNA from alignment at E-fasciculatus_F_contig10699:4490..4757+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10699.554.1 ID=mRNA_E-fasciculatus_F_contig10699.554.1|Name=mRNA_E-fasciculatus_F_contig10699.554.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=268bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10699:4490..4757+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10699:4490..4757+ >mRNA_E-fasciculatus_F_contig10699.554.1 ID=mRNA_E-fasciculatus_F_contig10699.554.1|Name=mRNA_E-fasciculatus_F_contig10699.554.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=534bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10699:4490..4757+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |