mRNA_E-fasciculatus_F_contig10674.535.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10674.535.1 vs. uniprot
Match: D7G548_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G548_ECTSI) HSP 1 Score: 488 bits (1257), Expect = 1.170e-166 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 1
Query: 1 QITLALNRPDMAYSAADALASAMYDSMFDWLVGRVNFAVQIFVKNHFEQLCINYTNEKLQQHFNKHTFQEEETVYSNEQIRFEHIHFIDNQPVVDLIEKKPYGLMPLLDEEVKIPKGSDGGWLSKCKTHNAQHPCLRPAGSNPNRFVVVHYAGEVPYEIGGFVTTNKDDLFRDLYDLVSGAQSDVTRSLFPPKDNNPRRLTTLGFKFRKALLDLMELVDTCEPWYIRCIKPNDQK 705
QITLALNRPDMAYSAADALASAMYDSMFDWLVGRVNFAVQIFVKNHFEQLCINYTNEKLQQHFNKHTFQEEETVYSNEQIRFEHIHFIDNQPVVDLIEKKPYGLMPLLDEEVKIPKGSDGGWLSKCKTHNAQHPCLRPAGSNPNRFVVVHYAGEVPYEIGGFVTTNKDDLFRDLYDLVSGAQSDVTRSLFPPKDNNPRRLTTLGFKFRKALLDLMELVDTCEPWYIRCIKPNDQK
Sbjct: 329 QITLALNRPDMAYSAADALASAMYDSMFDWLVGRVNFAVQIFVKNHFEQLCINYTNEKLQQHFNKHTFQEEETVYSNEQIRFEHIHFIDNQPVVDLIEKKPYGLMPLLDEEVKIPKGSDGGWLSKCKTHNAQHPCLRPAGSNPNRFVVVHYAGEVPYEIGGFVTTNKDDLFRDLYDLVSGAQSDVTRSLFPPKDNNPRRLTTLGFKFRKALLDLMELVDTCEPWYIRCIKPNDQK 563
BLAST of mRNA_E-fasciculatus_F_contig10674.535.1 vs. uniprot
Match: A0A6H5KSK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSK5_9PHAE) HSP 1 Score: 489 bits (1259), Expect = 1.050e-160 Identity = 240/260 (92.31%), Postives = 243/260 (93.46%), Query Frame = 1
Query: 1 QITLALNRPDMAYSAADALASAMYDSMFDWLVGRVNFAVQ-----------------IFVKNHFEQLCINYTNEKLQQHFNKHTFQEEETVYSNEQIRFEHIHFIDNQPVVDLIEKKPYGLMPLLDEEVKIPKGSDGGWLSKCKTHNAQHPCLRPAGSNPNRFVVVHYAGEVPYEIGGFVTTNKDDLFRDLYDLVSGAQSDVTRSLFPPKDNNPRRLTTLGFKFRKALLDLMELVDTCEPWYIRCIKPNDQKAANTFSSK 729
+ITLALNRPDMAYSAADALASAMYDSMFDWLVGRVNFAVQ IFVKNHFEQLCINYTNEKLQQHFNKHTFQEEETVYSNEQIRFEHIHFIDNQPVVDLIEK+PYGLMPLLDEEVKIPKGSDGGWLSKCKTHNAQHPCLRPAGSNPNRFVVVHYAGEVPYEIGGFVTTNKDDLFRDLYDLVSGAQSDVTRSLFPPKDNNPRRLTTLGFKFRKALLDLMELVDTCEPWYIRCIKPNDQKAANTF+SK
Sbjct: 428 EITLALNRPDMAYSAADALASAMYDSMFDWLVGRVNFAVQGEHSNKFIGVLDIFGFEIFVKNHFEQLCINYTNEKLQQHFNKHTFQEEETVYSNEQIRFEHIHFIDNQPVVDLIEKRPYGLMPLLDEEVKIPKGSDGGWLSKCKTHNAQHPCLRPAGSNPNRFVVVHYAGEVPYEIGGFVTTNKDDLFRDLYDLVSGAQSDVTRSLFPPKDNNPRRLTTLGFKFRKALLDLMELVDTCEPWYIRCIKPNDQKAANTFNSK 687
BLAST of mRNA_E-fasciculatus_F_contig10674.535.1 vs. uniprot
Match: A0A836C908_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C908_9STRA) HSP 1 Score: 372 bits (954), Expect = 3.470e-116 Identity = 180/260 (69.23%), Postives = 206/260 (79.23%), Query Frame = 1
Query: 4 ITLALNRPDMAYSAADALASAMYDSMFDWLVGRVNFAV-----------------QIFVKNHFEQLCINYTNEKLQQHFNKHTFQEEETVYSNEQIRFEHIHFIDNQPVVDLIEKKPYGLMPLLDEEVKIPKGSDGGWLSKCKTHNAQHPCLRPA-GSNPNRFVVVHYAGEVPYEIGGFVTTNKDDLFRDLYDLVSGAQSDVTRSLFPPKDNNPRRLTTLGFKFRKALLDLMELVDTCEPWYIRCIKPNDQKAANTFSSK 729
+T ALNR D A A DALA A YD MFDWLVGR+N AV +IF KNHFEQLCINYTNEKLQQHFN+HTFQEEETVY E I FEHI+FIDNQPVVDLIEKKPYGLMPLLDEEVK+P+G D WL KCK HNA+HP L G NPNRF V HYAG+V Y+ GGFV TN+D+LFRDLYD++S +++ +T+++FPPKD+NPRR TTLG KFR+ALLDLM LVD CEPWYIRCIKPNDQKAANTF+++
Sbjct: 533 VTKALNRADQATLAVDALAKAAYDHMFDWLVGRINVAVSGATTNTFIGVLDIFGFEIFEKNHFEQLCINYTNEKLQQHFNRHTFQEEETVYRAEAIAFEHINFIDNQPVVDLIEKKPYGLMPLLDEEVKLPRGGDAAWLGKCKQHNAEHPALAGTPGGNPNRFTVRHYAGDVGYDCGGFVDTNRDNLFRDLYDIMSSSRAPITKAVFPPKDSNPRRTTTLGEKFRRALLDLMALVDACEPWYIRCIKPNDQKAANTFNAR 792
BLAST of mRNA_E-fasciculatus_F_contig10674.535.1 vs. uniprot
Match: A0A7R9UA42_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA42_9STRA) HSP 1 Score: 277 bits (708), Expect = 2.600e-84 Identity = 140/255 (54.90%), Postives = 179/255 (70.20%), Query Frame = 1
Query: 16 LNRPDMAYSAADALASAMYDSMFDWLVGRVNFAVQ------------------IFVKNHFEQLCINYTNEKLQQHFNKHTFQEEETVYSNEQIRFEHIHFIDNQPVVDLIEKKPYGLMPLLDEEVKIPKGSDGGWLSKCKTHNAQHPCLRPA--GSNPNRFVVVHYAGEVPYEIGGFVTTNKDDLFRDLYDLVSGAQSDVTRSLFPPKDNNPRRLTTLGFKFRKALLDLMELVDTCEPWYIRCIKPNDQKAANTF 720
L++P A AADALA A++ +FDWLV R+N AVQ IF +N FEQLCIN+TNEKLQQHFN+ TF+EEE+VY +E IRF + FIDNQP++DLIEKKP+GLM LLDEEV++P+GSD W+ KC T +A +P + A G + + F + HYAG V Y GF+ NKD L+R++YD++S A +TR +FPPKD NPRR+ TLG KFR L +LM +VD CEP+YIRCIKPN +K AN F
Sbjct: 443 LHKPADAVEAADALAKAIFGKLFDWLVLRINDAVQFQMDNSLFIGVLDIFGFEIFEQNSFEQLCINFTNEKLQQHFNRSTFKEEESVYQSEGIRFAKVPFIDNQPILDLIEKKPFGLMVLLDEEVRLPQGSDSRWIQKCTTKHASNPNWQEARRGQSADVFAIQHYAGNVQYSSLGFMEKNKDSLYRNMYDMMSAAPHPLTREVFPPKDANPRRVQTLGEKFRSQLRNLMTVVDRCEPYYIRCIKPNHEKKANMF 697
BLAST of mRNA_E-fasciculatus_F_contig10674.535.1 vs. uniprot
Match: A0A7S1U0W2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0W2_9STRA) HSP 1 Score: 261 bits (666), Expect = 3.190e-77 Identity = 134/255 (52.55%), Postives = 172/255 (67.45%), Query Frame = 1
Query: 16 LNRPDMAYSAADALASAMYDSMFDWLVGRVNFAV------------------QIFVKNHFEQLCINYTNEKLQQHFNKHTFQEEETVYSNEQIRFEHIHFIDNQPVVDLIEKKPYGLMPLLDEEVKIPKGSDGGWLSKCKTHNAQHPCLRPAGSNPNR--FVVVHYAGEVPYEIGGFVTTNKDDLFRDLYDLVSGAQSDVTRSLFPPKDNNPRRLTTLGFKFRKALLDLMELVDTCEPWYIRCIKPNDQKAANTF 720
L++P A AADALA A++ ++FDWLV R+N AV +IF N FEQLCIN+TNEKLQQHFNK TF+EEE+VY +E I+++ + FIDNQP++D+IEKKP G++ LLDEE+++P+GSD WLSKC T +A A ++ R F + HYAG V Y GF+ NKD L+R++YD++S +TR +FPP D NPRRL TLG KFR L LM VD CEP YIRCIKPN +K AN F
Sbjct: 131 LHKPHDAVEAADALAKAIFGNLFDWLVKRINSAVDFTQANSLFIGVLDIFGFEIFETNSFEQLCINFTNEKLQQHFNKSTFKEEESVYQSEGIQYDKVPFIDNQPILDMIEKKPMGILILLDEEIRLPRGSDDRWLSKCGTRHAADANWIDAANDQARTMFTIQHYAGRVQYSSEGFMEKNKDALYRNMYDMMSRVPHPLTREVFPPMDANPRRLRTLGEKFRGQLKALMSTVDACEPHYIRCIKPNHKKKANMF 385
BLAST of mRNA_E-fasciculatus_F_contig10674.535.1 vs. uniprot
Match: F0Y2B5_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2B5_AURAN) HSP 1 Score: 224 bits (572), Expect = 9.700e-65 Identity = 133/277 (48.01%), Postives = 164/277 (59.21%), Query Frame = 1
Query: 7 TLALNRPDMAYSAADALASAMYDSMFDWLVGRVNFAV-------------------QIFVKNHFEQLCINYTNEKLQQHFNKHTFQEEETVYSNEQIRFEHIHFIDNQPVVDLIEKKPYGLMPLLDEEVKIPKGSDGGWLSKC-KTHNAQ---------HPCLRPAG----SNPNRFVVVHYAGEVPYEIGGFVTTNKDDLFRDLYDLVS---GAQSDVTRSLFPPKDNNPRRLTTLGFKFRKALLDLMELVDTCEPWYIRCIKPNDQKAANTFSSK 729
TL+ P A + A ALA A Y +FDWLV R+N AV +IF N FEQLCINYTNEKLQQHFN+HTF+EEE +Y +E I FE + FIDNQPV+DLIEKKP GL+ LD+ V P+GSD W+++C K+H A+ H R G + F V HYAG V Y I GF NKD L R+LYDL+S A V + LFP NPRR T+ +FRK L LM++VD +P Y+RC+KPN QK A F +K
Sbjct: 425 TLSPCAPAAAKAGARALAKAAYGRLFDWLVKRINVAVAQGGAAGGKFIGVLDIFGFEIFESNSFEQLCINYTNEKLQQHFNRHTFKEEENLYRSEGIDFEPVPFIDNQPVLDLIEKKPDGLLLALDDVVNAPQGSDAKWMARCEKSHAAKKEWVDVSEKHKGSRGRGVKQKGDEEFFTVRHYAGAVTYHIVGFCEKNKDPLGRNLYDLLSLKAPAFPLVGKELFPDLGRNPRRQPTIAGQFRKQLSALMKIVDAADPCYVRCVKPNQQKKARLFDAK 701
BLAST of mRNA_E-fasciculatus_F_contig10674.535.1 vs. uniprot
Match: A0A7S4L0Q8_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4L0Q8_9EUKA) HSP 1 Score: 223 bits (569), Expect = 2.980e-63 Identity = 111/245 (45.31%), Postives = 159/245 (64.90%), Query Frame = 1
Query: 49 DALASAMYDSMFDWLVGRVN--------------------FAVQIFVKNHFEQLCINYTNEKLQQHFNKHTFQEEETVYSNEQIRFEHIHFIDNQPVVDLIEKKPYGLMPLLDEEVKIPKGSDGGWLSKCKTHNAQHPCLRPAGSNPNRFVVVHYAGEVPYEIGGFVTTNKDDLFRDLYDLVSGAQSDVTRSLFPP-KDNNPRRLTTLGFKFRKALLDLMELVDTCEPWYIRCIKPNDQKAANTF 720
++ + +Y +FDW+V +VN F +IF N FEQLCIN+ NEKLQQHFN+HTF+ EE +Y EQI+F+H+ FIDNQPV+DLIE KP G++ LDEE+K+P+GSD +L+K H+ +P + ++ + F+V+HYAGEV Y+ F+ NKD L +DL+DL++ ++S +SLFP + R +LGF+FR+ L DLM+ ++ EP YIRC+KPND K A F
Sbjct: 442 NSFSKKIYAHLFDWIVAKVNQGMAAPKGAVKAGQINVLDIFGFEIFEVNSFEQLCINFCNEKLQQHFNQHTFKLEEQLYRREQIKFDHVEFIDNQPVLDLIELKPKGILVTLDEEIKVPRGSDTTFLNKINKHHGANPHFKEIRTSKSEFMVIHYAGEVLYDSYTFLEKNKDTLTQDLFDLITSSRSSFLKSLFPDINQSGSDRKVSLGFQFRRQLDDLMKTLNQTEPHYIRCVKPNDDKCAGLF 686
BLAST of mRNA_E-fasciculatus_F_contig10674.535.1 vs. uniprot
Match: A0A7S3YT57_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YT57_9EUKA) HSP 1 Score: 221 bits (563), Expect = 1.930e-62 Identity = 118/250 (47.20%), Postives = 157/250 (62.80%), Query Frame = 1
Query: 34 AYSAADALASAMYDSMFDWLVGRVN-------------------FAVQIFVKNHFEQLCINYTNEKLQQHFNKHTFQEEETVYSNEQIRFEHIHFIDNQPVVDLIEKKPYGLMPLLDEEVKIPKGSDGGWLSKC-KTHNAQHPCLRPAGSNPNRFVVVHYAGEVPYEIGGFVTTNKDDLFRDLYDLVSGAQSDVTRSLFPPKDNNPRRLTTLGFKFRKALLDLMELVDTCEPWYIRCIKPNDQKAANTFS 723
A +A DALA +Y+ MFDWLV R+N F +IF N FEQLCIN+TNEKLQQ FN+HTF+ EE +YS+E+I+++ + +IDNQPV+DLIEKKP G++P++DEE+++P+GSD +++K KTH P F+V HYAG+V YE GF+ NKD L+ D YDL+S + +FP D + TTLG KFRK L DLM ++ P YIRCIKPN KA F+
Sbjct: 571 ASAARDALAKFIYERMFDWLVARINKSIGTGKFVQGKTIGILDIFGFEIFKTNSFEQLCINFTNEKLQQFFNQHTFKLEEALYSSEKIQYKKVAYIDNQPVLDLIEKKPKGVLPMIDEELRLPRGSDDTYVAKLLKTHAPNKNYFGKILKRPKNFIVRHYAGDVEYESHGFLEKNKDRLYEDAYDLLSKSSFKFLSKMFPDDDAKHSK-TTLGAKFRKQLNDLMRTLNATYPHYIRCIKPNSAKAPMQFN 819
BLAST of mRNA_E-fasciculatus_F_contig10674.535.1 vs. uniprot
Match: A0A7S0DKF9_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DKF9_9EUKA) HSP 1 Score: 221 bits (562), Expect = 2.520e-62 Identity = 116/250 (46.40%), Postives = 159/250 (63.60%), Query Frame = 1
Query: 34 AYSAADALASAMYDSMFDWLVGRVN-------------------FAVQIFVKNHFEQLCINYTNEKLQQHFNKHTFQEEETVYSNEQIRFEHIHFIDNQPVVDLIEKKPYGLMPLLDEEVKIPKGSDGGWLSKC-KTHNAQHPCLRPAGSNPNRFVVVHYAGEVPYEIGGFVTTNKDDLFRDLYDLVSGAQSDVTRSLFPPKDNNPRRLTTLGFKFRKALLDLMELVDTCEPWYIRCIKPNDQKAANTFS 723
A +A DAL+ +Y+ MFDWLV ++N F +IF N FEQLCIN+TNEKLQQ FN+HTF+ EE +Y E+I ++ + +IDNQPV+DLIEKKP G++P++DEE+++PKGSD ++ K KTHN+ P F+V+HYAG+V YE GF+ NKD L+ D YDL+S +Q ++FP D + TLG KFR+ L DLM ++ P YIRCIKPN +KA +F+
Sbjct: 360 ATAARDALSKFIYERMFDWLVAKINKSIGTGNFVKGKTIGILDIFGFEIFKTNSFEQLCINFTNEKLQQFFNQHTFKLEEALYKAEKINYKKVAYIDNQPVLDLIEKKPKGILPMIDEELRLPKGSDDTYVQKLLKTHNSNKNYFAKVLKRPKNFLVMHYAGDVEYESRGFLEKNKDRLYEDAYDLLSRSQFKFLANMFPNSDIKGDK-QTLGAKFRRQLNDLMRTLNQTFPHYIRCIKPNAEKAPMSFT 608
BLAST of mRNA_E-fasciculatus_F_contig10674.535.1 vs. uniprot
Match: A0A3P3YER9_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YER9_PLABS) HSP 1 Score: 220 bits (561), Expect = 3.330e-62 Identity = 113/262 (43.13%), Postives = 158/262 (60.31%), Query Frame = 1
Query: 7 TLALNRPDMAYSAADALASAMYDSMFDWLVGRVN-------------------FAVQIFVKNHFEQLCINYTNEKLQQHFNKHTFQEEETVYSNEQIRFEHIHFIDNQPVVDLIEKKPYGLMPLLDEEVKIPKGSDGGWLSKCKTHNAQHPCLRPAGSNPNRFVVVHYAGEVPYEIGGFVTTNKDDLFRDLYDLVSGAQSDVTRSLFPPKDNNPR--RLTTLGFKFRKALLDLMELVDTCEPWYIRCIKPNDQKAANTFSSK 729
T L D A+ + DAL+ +Y +MFDW+VGR+N F ++F N FEQLCIN+TNE+LQQ FN +TF+ EE +Y+ E I+F+H+ +IDNQP+VDL+ +KP G+M LLDEEV +P+GSD +L K H+A HP + G N +F ++HYAG+V Y++ GF+ N+D L D L++G+ +F +N R TLG +FR L LM + T P YIRC+KPND K TF S+
Sbjct: 432 TAVLLSEDQAFDSRDALSKFIYAAMFDWIVGRINQAMSVQSGDRPRSIGILDIFGFEVFDLNSFEQLCINFTNERLQQFFNANTFKLEEELYTMEGIKFDHVAYIDNQPMVDLLTQKPLGIMNLLDEEVVVPQGSDAKFLGKISEHHASHPNFQKGGGNGQQFTIIHYAGKVVYDVAGFLEKNRDTLTPDAMALLNGSSLKFVADMFSQSENMSAKDRKVTLGKQFRNQLDTLMSTLHTTTPHYIRCVKPNDDKRPKTFVSR 693 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10674.535.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10674.535.1 >prot_E-fasciculatus_F_contig10674.535.1 ID=prot_E-fasciculatus_F_contig10674.535.1|Name=mRNA_E-fasciculatus_F_contig10674.535.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=234bp MAYSAADALASAMYDSMFDWLVGRVNFAVQIFVKNHFEQLCINYTNEKLQback to top mRNA from alignment at E-fasciculatus_F_contig10674:1846..4538- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10674.535.1 ID=mRNA_E-fasciculatus_F_contig10674.535.1|Name=mRNA_E-fasciculatus_F_contig10674.535.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2693bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10674:1846..4538- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10674:1846..4538- >mRNA_E-fasciculatus_F_contig10674.535.1 ID=mRNA_E-fasciculatus_F_contig10674.535.1|Name=mRNA_E-fasciculatus_F_contig10674.535.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1404bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10674:1846..4538- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |