mRNA_E-fasciculatus_F_contig10038.53.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10038.53.1 vs. uniprot
Match: D8LLL4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLL4_ECTSI) HSP 1 Score: 211 bits (537), Expect = 3.980e-67 Identity = 110/114 (96.49%), Postives = 113/114 (99.12%), Query Frame = 1 Query: 1 QVAALRAHAAEKESGLNMAREENGRLKEGVGMFQKELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMGNSGANDFMGGQRPPDVF 342
+VA L+AHAAEKESGLNMAREENGRLKEGVGMFQKELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMGNSGA+DFMGGQRPPDVF
Sbjct: 135 EVAVLQAHAAEKESGLNMAREENGRLKEGVGMFQKELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMGNSGASDFMGGQRPPDVF 248
BLAST of mRNA_E-fasciculatus_F_contig10038.53.1 vs. uniprot
Match: A0A836CIB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIB6_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 3.850e-20 Identity = 47/90 (52.22%), Postives = 60/90 (66.67%), Query Frame = 1 Query: 76 LKEGVGMFQKELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAM-GNSGANDFMGGQRPPDVF 342
++E +G ++LER ENRILKRAV IQNT+ K++E QL Q+AA AA Y KR+EQ NYAL VRVQ M G G ++PPDV+
Sbjct: 1 MREAMGALARDLERFQGENRILKRAVNIQNTRCKDVEAQLGAAQEAAAAAAAYAKRVEQVNYALGVRVQQMEGMGGEGGGFMERQPPDVY 90
BLAST of mRNA_E-fasciculatus_F_contig10038.53.1 vs. uniprot
Match: A0A6V1NE11_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NE11_HETAK) HSP 1 Score: 80.9 bits (198), Expect = 1.840e-16 Identity = 44/103 (42.72%), Postives = 65/103 (63.11%), Query Frame = 1 Query: 34 KESGLNMAREENGRLKEGVGMFQKELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMGNSGANDFMGGQRPPDVF 342
KE+ L+ + EN L+ + FQ EL+R+ EN+ILK+AV +QN+K KE E + + QA +++K+LEQTNYAL + ++ NS + QRPPDVF
Sbjct: 113 KEASLSQFKIENASLQNQLAQFQHELQRIQEENKILKKAVNLQNSKAKESEQTIKMQEATLVQAVDHIKKLEQTNYALRIHLE---NSKSTPLTFDQRPPDVF 212
BLAST of mRNA_E-fasciculatus_F_contig10038.53.1 vs. uniprot
Match: K3XAW0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAW0_GLOUD) HSP 1 Score: 74.3 bits (181), Expect = 3.580e-14 Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 34 KESGLNMAREENGRLKEGVGMFQKELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMGNSGANDFMGGQRPPDVF 342
KE R E ++ KE+ERL +EN++LKRA+ IQN + +E + + L+ A QAAE++KRLEQ+NYALSV +Q ++ + F +PPDVF
Sbjct: 87 KEVEFQQCRHELAQVHASTQSRDKEIERLQSENKLLKRAITIQNQQKEECQQENAVLRNLATQAAEHIKRLEQSNYALSVHLQTSTSTSSEHF----QPPDVF 185
BLAST of mRNA_E-fasciculatus_F_contig10038.53.1 vs. uniprot
Match: D0P4Q0_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P4Q0_PHYIT) HSP 1 Score: 72.0 bits (175), Expect = 4.320e-14 Identity = 41/90 (45.56%), Postives = 57/90 (63.33%), Query Frame = 1 Query: 73 RLKEGVGMFQKELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMGNSGANDFMGGQRPPDVF 342
RL E V + RL EN++LKRAV IQN + +E++ + + L+Q A QAAE++KRLEQ NY L V +Q N+G Q+PPDV+
Sbjct: 17 RLWERVDAQASDAARLQGENKLLKRAVAIQNQQKEEVQNENNALKQLATQAAEHMKRLEQANYTLRVHLQTSTNAGLGHQ---QQPPDVY 103
BLAST of mRNA_E-fasciculatus_F_contig10038.53.1 vs. uniprot
Match: A0A5D6XUD9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUD9_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 3.880e-13 Identity = 46/118 (38.98%), Postives = 70/118 (59.32%), Query Frame = 1 Query: 1 QVAALRA----HAAEKESGLNMAREENGRLKEGVGMFQKELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMGNSGANDFMGGQRPPDVF 342
++A +RA HA +KE L R E + + ++LERL+ EN++LKRA+ IQ+ + E + + L+ A QAAE++KRLE +NYALSV +Q N+ + +PPDVF
Sbjct: 71 EIARIRAEYEQHAMKKEMELQSCRRELQQARGAAHATARDLERLAGENKLLKRAITIQSQQKDECQQENAVLRNLATQAAEHIKRLEASNYALSVHLQTSTNAATSSRF---QPPDVF 185
BLAST of mRNA_E-fasciculatus_F_contig10038.53.1 vs. uniprot
Match: A0A6A3Z7N1_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Z7N1_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 7.390e-13 Identity = 41/103 (39.81%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 34 KESGLNMAREENGRLKEGVGMFQKELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMGNSGANDFMGGQRPPDVF 342
KE+ +E +E V ++ RL EN++LKRAVGIQN + +E++ + + L+Q A QAAE+++RLEQ NY L V +Q ++G Q+PPDV+
Sbjct: 84 KEAEFQRLGQELQHTQERVAQQASDVARLQGENKLLKRAVGIQNQQKEEVQHENNALKQLATQAAEHMRRLEQANYTLRVHLQTSTSAGNGHQ---QQPPDVY 183
BLAST of mRNA_E-fasciculatus_F_contig10038.53.1 vs. uniprot
Match: A0A7S2LD89_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LD89_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 3.540e-12 Identity = 39/89 (43.82%), Postives = 54/89 (60.67%), Query Frame = 1 Query: 76 LKEGVGMFQKELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMGNSGANDFMGGQRPPDVF 342
LK G Q + +++ ENRILKRAV IQ + ++ +L G + QA E ++RLEQ N L ++QA +S NDFMG RPPDV+
Sbjct: 152 LKSENGSLQTQNQKVEHENRILKRAVTIQQDRQHQVSAELEGARTFKEQAEERIRRLEQMNLTLQYQMQAQNSSAGNDFMG-LRPPDVY 239
BLAST of mRNA_E-fasciculatus_F_contig10038.53.1 vs. uniprot
Match: G4ZQH3_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZQH3_PHYSP) HSP 1 Score: 67.4 bits (163), Expect = 1.410e-11 Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 1 Query: 106 ELERLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMGNSGANDFMGGQRPPDVF 342
E+ RL EN++LKRAV IQN + + +E + L+Q A QAAE+++RLEQ NY L V +Q ++G Q+PPDV+
Sbjct: 102 EVARLQGENKLLKRAVNIQNEQNQAMEQENTALKQLATQAAEHIRRLEQANYTLRVHLQTSTSAGLGHQ---QQPPDVY 177
BLAST of mRNA_E-fasciculatus_F_contig10038.53.1 vs. uniprot
Match: D0MRK8_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MRK8_PHYIT) HSP 1 Score: 65.1 bits (157), Expect = 2.110e-11 Identity = 34/72 (47.22%), Postives = 48/72 (66.67%), Query Frame = 1 Query: 115 RLSAENRILKRAVGIQNTKGKELEGQLHGLQQAAGQAAEYVKRLEQTNYALSVRVQAMGNSGANDFMGGQRP 330
RL EN++LKRAV IQN + +E++ + + L+Q A QAAE++KRLEQ NY L V +Q N+G + RP
Sbjct: 13 RLQGENKLLKRAVAIQNQQKEEVQNENNALKQLATQAAEHMKRLEQANYTLRVHLQTSTNAGLGHHLMCTRP 84 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10038.53.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10038.53.1 >prot_E-fasciculatus_F_contig10038.53.1 ID=prot_E-fasciculatus_F_contig10038.53.1|Name=mRNA_E-fasciculatus_F_contig10038.53.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=115bp QVAALRAHAAEKESGLNMAREENGRLKEGVGMFQKELERLSAENRILKRAback to top mRNA from alignment at E-fasciculatus_F_contig10038:3429..5026- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10038.53.1 ID=mRNA_E-fasciculatus_F_contig10038.53.1|Name=mRNA_E-fasciculatus_F_contig10038.53.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1598bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10038:3429..5026- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10038:3429..5026- >mRNA_E-fasciculatus_F_contig10038.53.1 ID=mRNA_E-fasciculatus_F_contig10038.53.1|Name=mRNA_E-fasciculatus_F_contig10038.53.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=690bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10038:3429..5026- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |