prot_E_fasciculatus_S2_contig9873.17873.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9873.17873.1
Unique Nameprot_E_fasciculatus_S2_contig9873.17873.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length415
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig9873.17873.1 vs. uniprot
Match: A0A6H5JMA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA3_9PHAE)

HSP 1 Score: 473 bits (1217), Expect = 2.200e-163
Identity = 259/348 (74.43%), Postives = 271/348 (77.87%), Query Frame = 0 
Query:    1 MAGCVSGCRHPLWGGNGACTTVSGASTCVCDWGYASRDSMGRSSCVPRSVLVTAYATIAVTSLFTSIFLLWHVNKFHHLSRVHRSSRPALMRFRVLLCG-----------------------------SFFAVGMTCNFFRAMAMGGSLSLPELYVLQTNYSVFLPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLADKFRVFPALSMGLLVSISGIGLFSFSGAKWPFQAVDTIIVLGAVTTVV----------------------LTGVLAHQIMGCIDDARAKSSSQSAKDFYAKTKAGIRKQIAGYFLLAGANASSAIAFTYTATGRATPIIPFSIYVRV 297
            M  CV GCRHPLWGGNGACTTVSG STC+CD GYASRDSMGRSSCVPRSVLV AYATIAVTSL TSIFLLWH +KF  LSR+H+S+R ALMRFRVLLCG                             SFFA GM CNF  A AMGGSLSLPELYVLQTNY+VFLPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLAD+F+VF ALSMGLLV IS IG FSFSGA+WPFQAVDTIIVLGAVTT V                      LT V+AHQI+GCIDDARAKSSSQSAK FYAKTKAGI KQI GYF+LAGANASSAIAFTYTATGRATPIIPFS YVRV
Sbjct:    1 MTACVRGCRHPLWGGNGACTTVSGTSTCLCDSGYASRDSMGRSSCVPRSVLVMAYATIAVTSLITSIFLLWHASKFRQLSRLHQSTRSALMRFRVLLCGREKPLKSTSIRPLPLLVHRSRLCCRRLYRSFFAAGMACNFSLATAMGGSLSLPELYVLQTNYAVFLPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLADEFKVFQALSMGLLVGISVIGSFSFSGAQWPFQAVDTIIVLGAVTTRVSFAVRARFVCLLGGNFWNPKVGLTSVVAHQIIGCIDDARAKSSSQSAKVFYAKTKAGILKQITGYFVLAGANASSAIAFTYTATGRATPIIPFSTYVRV 348
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BLAST of mRNA_E_fasciculatus_S2_contig9873.17873.1 vs. uniprot
Match: D8LSN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSN7_ECTSI)

HSP 1 Score: 322 bits (825), Expect = 9.890e-107
Identity = 172/192 (89.58%), Postives = 178/192 (92.71%), Query Frame = 0 
Query:  106 MTCNFFRAMAMGGSLSLPELYVLQTNYSVFLPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLADKFRVFPALSMGLLVSISGIGLFSFSGAKWPFQAVDTIIVLGAVTTVVLTGVLAHQIMGCIDDARAKSSSQSAKDFYAKTKAGIRKQIAGYFLLAGANASSAIAFTYTATGRATPIIPFSIYVRV 297
            M CNF  A AMGGS SLPELYVLQTNY+VFLPVLMFGIPI+VDFWVQSLPMHLLP+HSFLAKAKVLADKF VF ALSMGLLVSIS +G FSFSGAKWPFQAVDTIIVLGAVTTV LTGVLAHQI+GCIDDARAKSSSQSAK FY KTKAGI KQIAGYF+LAGANASSAIAFTYTATGRAT IIPFSIYVRV
Sbjct:    1 MACNFSLATAMGGSRSLPELYVLQTNYAVFLPVLMFGIPIIVDFWVQSLPMHLLPNHSFLAKAKVLADKFNVFQALSMGLLVSISVVGSFSFSGAKWPFQAVDTIIVLGAVTTVGLTGVLAHQIIGCIDDARAKSSSQSAKVFYDKTKAGILKQIAGYFVLAGANASSAIAFTYTATGRATAIIPFSIYVRV 192
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BLAST of mRNA_E_fasciculatus_S2_contig9873.17873.1 vs. uniprot
Match: D8LSN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSN6_ECTSI)

HSP 1 Score: 286 bits (732), Expect = 1.640e-92
Identity = 159/207 (76.81%), Postives = 170/207 (82.13%), Query Frame = 0 
Query:   91 MRFRVLLCGSFFAVGMTCNFFRAMAMGGSLSLPELYVLQTNYSVFLPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLADKFRVFPALSMGLLVSISGIGLFSFSGAKWPFQAVDTIIVLGAVTTVVLTGVLAHQIMGCIDDARAKSSSQSAKDFYAKTKAGIRKQIAGYFLLAGANASSAIAFTYTATGRATPIIPFSIYVRV 297
            MRFRVLLCG               + G + SLPELYVLQT+YSVFLPVLMFGIPIVVDFW QSLPMHLLPDHSFLAKAKVLA KF+   ALSMGLLV IS IG FSF GA+WPF AVDTI V+GA +TV LT ++AHQI+GCIDDARAKSSSQSAK FY KTKAGI KQIAGYF+LAGANASSAI FTYTATGRAT IIPFSIYVRV
Sbjct:    1 MRFRVLLCGR-----NGLQLLLGDSDGRNRSLPELYVLQTSYSVFLPVLMFGIPIVVDFWAQSLPMHLLPDHSFLAKAKVLAGKFKAVQALSMGLLVGISLIGSFSFGGAEWPFHAVDTIAVVGAASTVGLTDLVAHQIVGCIDDARAKSSSQSAKVFYDKTKAGILKQIAGYFVLAGANASSAITFTYTATGRATAIIPFSIYVRV 202
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9873.17873.1 vs. uniprot
Match: A0A6H5JML4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML4_9PHAE)

HSP 1 Score: 255 bits (652), Expect = 1.990e-80
Identity = 144/184 (78.26%), Postives = 150/184 (81.52%), Query Frame = 0 
Query:  136 LPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLADKFRVFPALSMGLLVSISGIGLFSFSGAKWPFQAVDTIIVLGAVTTVV----------------------LTGVLAHQIMGCIDDARAKSSSQSAKDFYAKTKAGIRKQIAGYFLLAGANASSAIAFTYTATGRATPIIPFSIYVRV 297
            LPVLMFGIPIVVDFWVQSLPMHLLPDHS LAKAKVLAD+F VF ALSMGLLV I+ IG FSFSGA+WPFQAVDTIIVLGAVTT V                      LT V+AHQI+GCIDDARAKSSSQSAK FYAKTKAGI KQI GYF+LAGANASSAIAFTYTATGRATPIIPFSI VRV
Sbjct:    3 LPVLMFGIPIVVDFWVQSLPMHLLPDHSLLAKAKVLADEFNVFQALSMGLLVGIALIGSFSFSGARWPFQAVDTIIVLGAVTTRVSFAVRARFVCLLGGNFWNPKVGLTSVVAHQIIGCIDDARAKSSSQSAKVFYAKTKAGILKQITGYFVLAGANASSAIAFTYTATGRATPIIPFSIDVRV 186
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9873.17873.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JMA3_9PHAE2.200e-16374.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSN7_ECTSI9.890e-10789.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LSN6_ECTSI1.640e-9276.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JML4_9PHAE1.990e-8078.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 288..310
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 113..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 283..287
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 210..233
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 260..282
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 234..259
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 132..151
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..73
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 74..92
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 152..176
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 199..209
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..112
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 311..414
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 177..198
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..49
NoneNo IPR availableTMHMMTMhelixcoord: 93..115
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 177..199
NoneNo IPR availableTMHMMTMhelixcoord: 125..147
NoneNo IPR availableTMHMMTMhelixcoord: 261..283
NoneNo IPR availableTMHMMTMhelixcoord: 50..72
NoneNo IPR availableTMHMMTMhelixcoord: 209..231
NoneNo IPR availableTMHMMTMhelixcoord: 288..310

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9873contigE_fasciculatus_S2_contig9873:1610..5018 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9873.17873.1mRNA_E_fasciculatus_S2_contig9873.17873.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9873 1610..5018 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9873.17873.1 ID=prot_E_fasciculatus_S2_contig9873.17873.1|Name=mRNA_E_fasciculatus_S2_contig9873.17873.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=415bp
MAGCVSGCRHPLWGGNGACTTVSGASTCVCDWGYASRDSMGRSSCVPRSV
LVTAYATIAVTSLFTSIFLLWHVNKFHHLSRVHRSSRPALMRFRVLLCGS
FFAVGMTCNFFRAMAMGGSLSLPELYVLQTNYSVFLPVLMFGIPIVVDFW
VQSLPMHLLPDHSFLAKAKVLADKFRVFPALSMGLLVSISGIGLFSFSGA
KWPFQAVDTIIVLGAVTTVVLTGVLAHQIMGCIDDARAKSSSQSAKDFYA
KTKAGIRKQIAGYFLLAGANASSAIAFTYTATGRATPIIPFSIYVRVLTG
VLAFGPFIVFTRFGSSATRRPQPPPSPQQSQPPAHLPLSPQEEARRQEKG
ARTDDARPLFQRATSGVSLLFKRMLDRMESGEAVVAVTCEDPGIQGSRSE
YDPRGGGQPPKSKE*
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