prot_E_fasciculatus_S2_contig9704.17709.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9704.17709.1
Unique Nameprot_E_fasciculatus_S2_contig9704.17709.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length503
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig9704.17709.1 vs. uniprot
Match: D8LSJ8_ECTSI (Myb-like DNA-binding protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSJ8_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 1.700e-83
Identity = 191/257 (74.32%), Postives = 197/257 (76.65%), Query Frame = 0 
Query:  106 RAALDTPAATTASGVAGPGGIPMSFSGLPPSSSSSLASIKPNLTPAEAAVIHAGQGQRSLSYAAAFAAASGATSSSSSPGYPINDAAAGAA-TCGSLGRIDRPPGVGVGTGFPHESGQAVAGSSCGGG---GEGKSTRQQWSQKGVGGEASSFDDRAPLTGSGLAAXXXXXXXXXXXXXMVPAVQGAPAPEGARTSPSPRYPFAPGDGGGGG---DERPAXXXXXXXXXXXXXXXRLHRLCAALANVEAMDKMHRRG 355
            RAALDTPAA  ASGVAGPGG+ MSFS LP   SSSLA IKPNLTPAEA  IHA Q +RSLSY +AFAAAS ATS S  PGYPINDA+AGAA TC SLGRIDRPPGVGVG GF  ES QAVAGS CGGG   GEGKS RQ WSQKGVGGEASSFDDRAPLTGSGLAAXXXXXXXX     MVPAV+GA APEGARTSPS RYPFA GDG G     +ERPA                LHRLCAALANVEAMD MHRRG
Sbjct:  374 RAALDTPAA--ASGVAGPGGMSMSFSNLP--LSSSLADIKPNLTPAEAGAIHAEQARRSLSYPSAFAAASAATSPS--PGYPINDASAGAAATCASLGRIDRPPGVGVGAGFQQESEQAVAGSCCGGGREGGEGKSGRQHWSQKGVGGEASSFDDRAPLTGSGLAAXXXXXXXXVSGSGMVPAVKGAAAPEGARTSPSRRYPFASGDGSGXXXXXEERPAGNGGKMEGAGDGG---LHRLCAALANVEAMDNMHRRG 621
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9704.17709.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSJ8_ECTSI1.700e-8374.32Myb-like DNA-binding protein, putative n=2 Tax=Ect... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 500..502

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9704contigE_fasciculatus_S2_contig9704:480..1988 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9704.17709.1mRNA_E_fasciculatus_S2_contig9704.17709.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9704 318..2165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9704.17709.1 ID=prot_E_fasciculatus_S2_contig9704.17709.1|Name=mRNA_E_fasciculatus_S2_contig9704.17709.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=503bp
MLPRPTAAAPNGPLSSSSSSSSSSLSDAGGGRGAVDGREKARGGMMVGPG
GGGGGRATVARSSSASSSSSSASSSSAAAALGGGGSSSSFPKAASRRQKG
GVSGARAALDTPAATTASGVAGPGGIPMSFSGLPPSSSSSLASIKPNLTP
AEAAVIHAGQGQRSLSYAAAFAAASGATSSSSSPGYPINDAAAGAATCGS
LGRIDRPPGVGVGTGFPHESGQAVAGSSCGGGGEGKSTRQQWSQKGVGGE
ASSFDDRAPLTGSGLAAAAAAAASAGTGSGMVPAVQGAPAPEGARTSPSP
RYPFAPGDGGGGGDERPAGGGGGKMEGAGGGDGRLHRLCAALANVEAMDK
MHRRGGGAAAAAGTASSSRASPKRAGLEGGGGRRSGRSTPSREEGKQQQQ
QVGSKSPGAAAAAAASRAKRARDDGAGVGKAQASAGGAAAAAQGGGSPSK
VASDPPPAKRAAVSPANTGAAVPTSCSPPTAASSPAAAPAAAAVAGSVAS
HD*
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