prot_E_fasciculatus_S2_contig939.17439.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig939.17439.1
Unique Name	prot_E_fasciculatus_S2_contig939.17439.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	165

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig939.17439.1 vs. uniprot
Match: D8LN79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN79_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 4.470e-63
Identity = 116/163 (71.17%), Postives = 124/163 (76.07%), Query Frame = 0

Query:    1 MKYSIAAWFLWLYSAADALICSTEPIGSSRSGAARRPRRXXXXXXXXXXXXXXXXRCSAAGQAMATRWFCAADSSSHRSYPMMCGGVAGYDQRELVLREFTMPLQGSPGSYERRVRSECLREGGETATVVRWHISRADEATGHAHVEAVFLLATSVSGAETTI 163
            MKYSI AWF+WLY+AADALI ST PIGSS +GA+RR R                 R SAA Q M TR  CAADS  H+SY MMCG VA YDQ+ELVLREF +PLQ SPGSYERRVR+ECLREGGE ATVVRWHIS ADEATG AHVEAVFLLATSVSGAET I
Sbjct:    1 MKYSIVAWFVWLYTAADALI-STAPIGSS-AGASRRGR---IHRHLSAVTLLTLPRRSAARQEMGTRRLCAADSI-HKSYSMMCG-VADYDQQELVLREFALPLQASPGSYERRVRAECLREGGEAATVVRWHISHADEATGRAHVEAVFLLATSVSGAETAI 156

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig939.17439.1 vs. uniprot
Match: A0A6H5JKU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKU9_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 1.290e-52
Identity = 108/163 (66.26%), Postives = 117/163 (71.78%), Query Frame = 0

Query:    1 MKYSIAAWFLWLYSAADALICSTEPIGSSRSGAARRPRRXXXXXXXXXXXXXXXXRCSAAGQAMATRWFCAADSSSHRSYPMMCGGVAGYDQRELVLREFTMPLQGSPGSYERRVRSECLREGGETATVVRWHISRADEATGHAHVEAVFLLATSVSGAETTI 163
            MKYSI AWF+W Y+AADAL  +T PIGSS +GA+ R R                 R S AGQ M TR  CAADS  HRSYPMM  GVA  D +ELVLREF +PLQ SPGSYERRVR+ECLREGGETATVVRWHIS ADEATG AHVEAVFLLA SVS  + TI
Sbjct:    1 MKYSIVAWFVW-YTAADALF-ATAPIGSS-AGASHRGR---IHRHLSAATLLALPRRSDAGQGMGTRRLCAADSI-HRSYPMM-RGVAD-DHQELVLREFALPLQASPGSYERRVRAECLREGGETATVVRWHISHADEATGRAHVEAVFLLAASVSVDKITI 154

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig939.17439.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig939.17439.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LN79_ECTSI	4.470e-63	71.17	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JKU9_9PHAE	1.290e-52	66.26	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 5..13
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 19..164
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..4
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..18 score: 0.812

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig939	contig	E_fasciculatus_S2_contig939:23693..25478 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig939.17439.1	mRNA_E_fasciculatus_S2_contig939.17439.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig939 22539..25589 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig939.17439.1 ID=prot_E_fasciculatus_S2_contig939.17439.1|Name=mRNA_E_fasciculatus_S2_contig939.17439.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=165bp
MKYSIAAWFLWLYSAADALICSTEPIGSSRSGAARRPRRRRDRHLSASPL
PLPLPRCSAAGQAMATRWFCAADSSSHRSYPMMCGGVAGYDQRELVLREF
TMPLQGSPGSYERRVRSECLREGGETATVVRWHISRADEATGHAHVEAVF
LLATSVSGAETTIT*