prot_E_fasciculatus_S2_contig9249.17306.1 (polypeptide) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9249.17306.1 vs. uniprot
Match: D8LNK4_ECTSI (DNA polymerase mu n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK4_ECTSI) HSP 1 Score: 528 bits (1360), Expect = 1.180e-183 Identity = 263/318 (82.70%), Postives = 277/318 (87.11%), Query Frame = 0
Query: 1 LQSHPRNQVCQQLMKVHGVGSKTAKEWYNRGIRSVEDARSTLLPKDDGTEGDDERPYLKPEVVMGLKHFHDMQASVPIGRDEVVGIADEVREEAERFGRERDPEGTVLFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVELVRRPQGRDIHPRNRKSTGLPTLDDNVTDKLKHPCQGLKERLTESGKLCATLYQGQMGGFTKPKAGQTPQPKLEREEVLMALWQLPGRKCRIDIVQVALPQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRATEEPVTDVASFQTEEDIFRFLGLEYIPPHLRWV 318
L+SHPRNQVCQQLMKVHGVGS+TAK+WYNRGIRSVEDAR TLLP DD TEGD++RP LKPEVVMGLKHFHDMQ VPIGRDEVVGIADEVREEAERFGRERDPEGT+LFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVE +R G + + +D + +GLKERL E GKLCATLYQGQMGGFTK K GQ PQPKLEREEVLMALWQLPGRKCRIDIVQVA QWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRAT+EPVTD+ SFQTEEDIFRFLGLEYIPPHLRWV
Sbjct: 276 LKSHPRNQVCQQLMKVHGVGSRTAKDWYNRGIRSVEDARRTLLPNDDDTEGDEKRPNLKPEVVMGLKHFHDMQ--VPIGRDEVVGIADEVREEAERFGRERDPEGTLLFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVEALRALDGYLVEGEQIVGAEVKAFEDLEYFFV----EGLKERLMERGKLCATLYQGQMGGFTKAKGGQAPQPKLEREEVLMALWQLPGRKCRIDIVQVASSQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRATDEPVTDIVSFQTEEDIFRFLGLEYIPPHLRWV 587
BLAST of mRNA_E_fasciculatus_S2_contig9249.17306.1 vs. uniprot
Match: A0A6H5JIS2_9PHAE (DNA_pol_B_thumb domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIS2_9PHAE) HSP 1 Score: 191 bits (486), Expect = 2.430e-58 Identity = 90/94 (95.74%), Postives = 92/94 (97.87%), Query Frame = 0
Query: 225 MALWQLPGRKCRIDIVQVALPQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRATEEPVTDVASFQTEEDIFRFLGLEYIPPHLRWV 318
MALWQLPGRKCRIDIVQVA PQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRAT+EPVTD+ SFQTEEDIFRFLGLEYIPPHLRWV
Sbjct: 1 MALWQLPGRKCRIDIVQVASPQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRATDEPVTDIVSFQTEEDIFRFLGLEYIPPHLRWV 94
BLAST of mRNA_E_fasciculatus_S2_contig9249.17306.1 vs. uniprot
Match: A0A6H5JHR4_9PHAE (DNA_pol_lambd_f domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR4_9PHAE) HSP 1 Score: 139 bits (349), Expect = 6.040e-33 Identity = 63/73 (86.30%), Postives = 69/73 (94.52%), Query Frame = 0
Query: 1 LQSHPRNQVCQQLMKVHGVGSKTAKEWYNRGIRSVEDARSTLLPKDDGTEGDDERPYLKPEVVMGLKHFHDMQ 73
L+SHPRNQVCQ+LMKVHGVGS+TAK+WYNRGIRSVEDAR TLLP DD TEG+D+RP LKPEVVMGLKHFHDMQ
Sbjct: 698 LKSHPRNQVCQELMKVHGVGSRTAKDWYNRGIRSVEDARRTLLPNDDDTEGEDKRPNLKPEVVMGLKHFHDMQ 770
BLAST of mRNA_E_fasciculatus_S2_contig9249.17306.1 vs. uniprot
Match: A0A6J0SPZ7_9SAUR (DNA-directed DNA/RNA polymerase mu n=2 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0SPZ7_9SAUR) HSP 1 Score: 114 bits (285), Expect = 9.760e-25 Identity = 91/317 (28.71%), Postives = 147/317 (46.37%), Query Frame = 0
Query: 1 LQSHPRNQVCQQLMKVHGVGSKTAKEWYNRGIRSVEDARSTLLPKDDGTEGDDERPYLKPEVVMGLKHFHDMQASVPIGRDEVVGIADEVREEAERFGRERDPEGTVLFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVELVRRPQGRDIHPRNRKSTGLPTLDDNVTDKLKHPCQGLKERLTESGKLCATLY-QGQMGGFTKPKAGQTPQPKLEREEVLMALWQLPGRKCRIDIVQVALPQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRATEEPVTDVASFQTEEDIFRFLGLEYIPPHLR 316
+Q + Q + K+ GVG KTA +WY G R+++D R L E GL H+ D+ + P+ R + I VRE + P +V + GGFRRGK + HDVD+L++ E G V QG ++ ++T +L+D+ + H + + C +++ G + G + AG ++ R W + R+D+V Q+PFALLGW+G+ +FE+D+RR+ + E K+ T+ E+ A+ +E++IF+ LGLEYIPP R
Sbjct: 248 IQQSEKFQTMKLFTKIFGVGVKTAHQWYQEGRRTLDDLRGHPA-------------QLSKEQQAGLIHYEDL--NTPVKRADAEAIGQVVREAVNKC----LPSASVT--LTGGFRRGKPSGHDVDLLITHPTEGQEAGLLKKVIACLDQQGFLLYHSIHRNT-FESLEDSDQEPSSHASS------MDQYERCFSIFCLGDLPGDAQEGAGAEKPSRVRRTSGASRFW----KAVRVDLVVTPYSQFPFALLGWTGSRIFERDLRRFA--KREKKMLLNSHTLYHLEQKTWMSAA--SEKEIFQHLGLEYIPPEER 528
BLAST of mRNA_E_fasciculatus_S2_contig9249.17306.1 vs. uniprot
Match: UPI001CF78DD6 (DNA-directed DNA/RNA polymerase mu isoform X4 n=1 Tax=Varanus komodoensis TaxID=61221 RepID=UPI001CF78DD6) HSP 1 Score: 112 bits (280), Expect = 2.450e-24 Identity = 94/313 (30.03%), Postives = 148/313 (47.28%), Query Frame = 0
Query: 6 RNQVCQQLMKVHGVGSKTAKEWYNRGIRSVEDARSTLLPKDDGTEGDDERPYLKPEVVMGLKHFHDMQASVPIGRDEVVGIADEVREEAERFGRERDPEGTVLFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVELVRRPQGRDIHPRNRKSTGLPTLDDNVTDKLKHPCQGLKERLTESGKLCATLYQ--GQMGGFTKPKAGQTPQPKLEREEVLMALWQLPGRKCRIDIVQVALPQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRATEEPVTDVASFQTEEDIFRFLGLEYIPPHLR 316
R Q + K+ GVG KTA +WY G+R+++D + L E GL H+ D+ S P+ R E I+ VRE AER+ GT + + GGFRRGK + HDVD+L++ + E G + QG ++ + ++T P + + G +R + C ++++ + GG Q P R+ V R+D+V Q+PFALLGW+G+ FE+D+RR+ + E K++ + E+ + A+ +EE+IF+ LGLEYIPP R
Sbjct: 176 RYQTMKLFTKMFGVGVKTASQWYQEGLRTLQDLQMRCTK-------------LSREQQAGLLHYTDL--STPVERPEAEAISQLVREVAERY-----LPGTSVT-LTGGFRRGKRSGHDVDLLITHPVESREEGLLSKIISWLHSQGFLLYQNSCRNTFQPFK---MEVQEASGSAGSMDRFEQ----CFSIFRLADRPGGPRGDAGAQKPGASSSRKAV------------RVDLVISPYSQFPFALLGWTGSRNFERDLRRFARQ--EKKMALNSHALYHMEQKIFLPAA--SEEEIFQHLGLEYIPPEER 444
BLAST of mRNA_E_fasciculatus_S2_contig9249.17306.1 vs. uniprot
Match: A0A8D2KWW6_VARKO (DNA-directed DNA/RNA polymerase mu n=4 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2KWW6_VARKO) HSP 1 Score: 112 bits (280), Expect = 3.630e-24 Identity = 94/313 (30.03%), Postives = 148/313 (47.28%), Query Frame = 0
Query: 6 RNQVCQQLMKVHGVGSKTAKEWYNRGIRSVEDARSTLLPKDDGTEGDDERPYLKPEVVMGLKHFHDMQASVPIGRDEVVGIADEVREEAERFGRERDPEGTVLFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVELVRRPQGRDIHPRNRKSTGLPTLDDNVTDKLKHPCQGLKERLTESGKLCATLYQ--GQMGGFTKPKAGQTPQPKLEREEVLMALWQLPGRKCRIDIVQVALPQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRATEEPVTDVASFQTEEDIFRFLGLEYIPPHLR 316
R Q + K+ GVG KTA +WY G+R+++D + L E GL H+ D+ S P+ R E I+ VRE AER+ GT + + GGFRRGK + HDVD+L++ + E G + QG ++ + ++T P + + G +R + C ++++ + GG Q P R+ V R+D+V Q+PFALLGW+G+ FE+D+RR+ + E K++ + E+ + A+ +EE+IF+ LGLEYIPP R
Sbjct: 222 RYQTMKLFTKMFGVGVKTASQWYQEGLRTLQDLQMRCTK-------------LSREQQAGLLHYTDL--STPVERPEAEAISQLVREVAERY-----LPGTSVT-LTGGFRRGKRSGHDVDLLITHPVESREEGLLSKIISWLHSQGFLLYQNSCRNTFQPFK---MEVQEASGSAGSMDRFEQ----CFSIFRLADRPGGPRGDAGAQKPGASSSRKAV------------RVDLVISPYSQFPFALLGWTGSRNFERDLRRFARQ--EKKMALNSHALYHMEQKIFLPAA--SEEEIFQHLGLEYIPPEER 490
BLAST of mRNA_E_fasciculatus_S2_contig9249.17306.1 vs. uniprot
Match: UPI000E1E930D (DNA-directed DNA/RNA polymerase mu n=1 Tax=Dromaius novaehollandiae TaxID=8790 RepID=UPI000E1E930D) HSP 1 Score: 108 bits (271), Expect = 2.200e-23 Identity = 89/299 (29.77%), Postives = 134/299 (44.82%), Query Frame = 0
Query: 16 VHGVGSKTAKEWYNRGIRSVEDARSTLLPKDDGTEGDDERPYLKPEVVMGLKHFHDMQASVPIGRDEVVGIADEVREEAERFGRERDPEGTVLFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVELVRRPQGRDIHPRNRKSTGLPTLDDNVTDKLKHPCQGLKERLTESGKLCATLYQGQMGGFTKPKAGQTPQPKLEREEVLMALWQLPGRKCRIDIVQVALPQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRATEEPVTDV-ASFQTEEDIFRFLGLEYIPP 313
+ GVG++TA WY +G+R+++D R+ P L + GL+H+ D+ + P+ E +A+ VR EA R P+ TV + GGFRRGK T HDVD+L+S HP + L L RL + G L Q G +P G + + ER ++ L R R+D+V Q+ FALLGW+G+ FE+++RR+ Q LS G+ +P ++ +EE+IF+ LGL+YIPP
Sbjct: 153 IFGVGTQTAARWYRQGLRTLDDLRAA-------------GPRLSRQQQAGLRHWEDL--ATPVTLAEAEAVAELVRAEARRV----LPDATVT--LVGGFRRGKPTGHDVDLLLS-------------------------HPEEGRERAL--------------LGPLVARLEQQGLLLYEQSQPNTFGL-EPSGGGSGLDRFERCFAIVRL----ARALRVDMVVAPRGQFAFALLGWTGSRHFERELRRFASHQRGLALSSHGLY-----DPXRELFLPAASEEEIFQLLGLDYIPP 381
BLAST of mRNA_E_fasciculatus_S2_contig9249.17306.1 vs. uniprot
Match: UPI00112ACE1A (DNA-directed DNA/RNA polymerase mu n=1 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112ACE1A) HSP 1 Score: 110 bits (274), Expect = 2.660e-23 Identity = 90/311 (28.94%), Postives = 145/311 (46.62%), Query Frame = 0
Query: 6 RNQVCQQLMKVHGVGSKTAKEWYNRGIRSVEDARSTLLPKDDGTEGDDERPYLKPEVVMGLKHFHDMQASVPIGRDEVVGIADEVREEAERFGRERDPEGTVLFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVELVRRPQGRDIHPRNRKSTGLPTLDDNVTDKLK-HPCQ-GLKERLTESGKLCATLYQGQMGGFTKPKAGQ-TPQPKLEREEVLMALWQLPGRKCRIDIVQVALPQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRATEEPVTDVASFQTEEDIFRFLGLEYIPP 313
R Q + + GVG KTA WY G+RS+ D R + L E GL+H+ D+ + P+ R E IA + E RF E + ++ GGFRRGK HDVD+L++ + E G ++L+ Q S GL D + + HP Q + + + C ++++ + ++K G T L R+ W + R+D++ + Q+P+ALLGW+G+ FE+++RR++ + + L+ + T + VAS EEDIF LGLE++PP
Sbjct: 236 RYQTMKLFTNIFGVGVKTADNWYQEGLRSLGDLRK-------------HQKKLTQEQEAGLQHYEDL--NTPVSRREADVIAKMIEEATCRFLPE------TVVKLTGGFRRGKPFGHDVDILITHPQEGSEEGL--LIKLISWLQ----------SQGLILYHDLKKNSYQDHPSQRSVSTSAMDHFERCFSIFRLKGQSWSKGDGGAGTHSTDLARDPGAFRDW----KAVRVDLIVAPMSQYPYALLGWTGSKHFERELRRFSFHEKKMVLNSHA--LYDTVQQTFLVAS--REEDIFAHLGLEFVPP 505
BLAST of mRNA_E_fasciculatus_S2_contig9249.17306.1 vs. uniprot
Match: A0A194S0Q7_RHOGW (DNA polymerase n=1 Tax=Rhodotorula graminis (strain WP1) TaxID=578459 RepID=A0A194S0Q7_RHOGW) HSP 1 Score: 108 bits (270), Expect = 2.960e-23 Identity = 94/313 (30.03%), Postives = 140/313 (44.73%), Query Frame = 0
Query: 6 RNQVCQQLMKVHGVGSKTAKEWYNRGIRSVEDARSTLLPKDDGTEGDDERPYLKPEVVMGLKHFH-DMQASVPIGRDEVVGIADEVREEAERFGRERDPEGTVLFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVELVRRPQGRDIHPRNRKSTGLPTLDDNVTDKLKHPCQGLKERLTESGKLCATLYQGQMG-GFTKPKAGQTPQPKLEREEVLMALWQLPGRKCRIDIVQVALPQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRATEEPVTDVASFQTEEDIFRFLGLEYIPPHLR 316
R +V + L VHGVG A + Y+ G R+++D ++ L + D ++ FH D+Q P+ R EV + D VR + ++ G L E+CGG+RRGK T D+D+L++F +G +GF L L D + K P G LTE+G T + G T KA + +W+ R+D+V A P W A+LGW+G+ FE+D+RR+ + + G+ + T E V +TE D FR L LE+IPPHLR
Sbjct: 124 RFKVLRLLTTVHGVGHALANKLYDDGTRTLDDLQAMLKDRHD---------------ILRYMRFHADLQE--PVSRTEVESVRDFVRLQVDKV-----LPGAHL-ELCGGYRRGKATSGDIDILITFPHQDGL--ERGF---------------------LRRLVDRLVKKGLVPRDGGVLSLTEAGSSRTTWANRRASLGDTLDKALVVFRHPANGTTRTRDVWR------RVDLVVAAWPHWGPAVLGWTGSTQFERDLRRHAGKLCRLHVHSGGIRDKETNEHV----EAKTERDCFRLLKLEWIPPHLR 380
BLAST of mRNA_E_fasciculatus_S2_contig9249.17306.1 vs. uniprot
Match: A0A6P7XX35_9AMPH (DNA-directed DNA/RNA polymerase mu n=2 Tax=Microcaecilia unicolor TaxID=1415580 RepID=A0A6P7XX35_9AMPH) HSP 1 Score: 109 bits (273), Expect = 3.420e-23 Identity = 88/310 (28.39%), Postives = 146/310 (47.10%), Query Frame = 0
Query: 6 RNQVCQQLMKVHGVGSKTAKEWYNRGIRSVEDARSTLLPKDDGTEGDDERPYLKPEVVMGLKHFHDMQASVPIGRDEVVGIADEVREEAERFGRERDPEGTVLFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVELVRRPQGRDIHPRNRKSTGLPTLDDNVTDKLKHPCQGLKERLTESGKLCATLYQGQMGGFTKPKAGQTPQPKLEREEVLMALWQLPGRKCRIDIVQVALPQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGV--TIRATEEPVTDVASFQTEEDIFRFLGLEYIPP 313
R Q + + GVG KTA +WY G+RS+ D R++ ++ L + GL+H+ D+ ++P+ E IA V E A RF GT++ + GGFRRGK + HDVD+L++ + E G V + QG ++ ++++ + + GK +++ + G F+ K Q + V + R+D+V + Q+PFALLGW+G+ FE+++RR++ + + L+ + T++ T T +EEDIF LGLEYIPP
Sbjct: 231 RYQTMKLFTNIFGVGIKTANKWYQEGLRSIGDLRNSQ-----------KKLKLTKQQETGLQHYEDL--TMPVSHTEADLIAKMVEEVAHRF-----LPGTIIT-LAGGFRRGKLSGHDVDILITHPQEGREEGLLSKVISQLQSQGLILYHSLKRNSYY-------------------DASSPGGKSTSSMDHFE-GSFSIFKLKGLSQSRDNGARVHSTDSGRDWKAVRVDLVVTPISQYPFALLGWTGSKHFERELRRFSSHEKKMVLNSHALYDTVQQTFLAAT------SEEDIFMHLGLEYIPP 495 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9249.17306.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E_fasciculatus_S2_contig9249.17306.1 ID=prot_E_fasciculatus_S2_contig9249.17306.1|Name=mRNA_E_fasciculatus_S2_contig9249.17306.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=319bpback to top |