prot_E_fasciculatus_S2_contig9249.17306.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9249.17306.1
Unique Nameprot_E_fasciculatus_S2_contig9249.17306.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length319
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9249.17306.1 vs. uniprot
Match: D8LNK4_ECTSI (DNA polymerase mu n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK4_ECTSI)

HSP 1 Score: 528 bits (1360), Expect = 1.180e-183
Identity = 263/318 (82.70%), Postives = 277/318 (87.11%), Query Frame = 0
Query:    1 LQSHPRNQVCQQLMKVHGVGSKTAKEWYNRGIRSVEDARSTLLPKDDGTEGDDERPYLKPEVVMGLKHFHDMQASVPIGRDEVVGIADEVREEAERFGRERDPEGTVLFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVELVRRPQGRDIHPRNRKSTGLPTLDDNVTDKLKHPCQGLKERLTESGKLCATLYQGQMGGFTKPKAGQTPQPKLEREEVLMALWQLPGRKCRIDIVQVALPQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRATEEPVTDVASFQTEEDIFRFLGLEYIPPHLRWV 318
            L+SHPRNQVCQQLMKVHGVGS+TAK+WYNRGIRSVEDAR TLLP DD TEGD++RP LKPEVVMGLKHFHDMQ  VPIGRDEVVGIADEVREEAERFGRERDPEGT+LFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVE +R   G  +         +   +D     +    +GLKERL E GKLCATLYQGQMGGFTK K GQ PQPKLEREEVLMALWQLPGRKCRIDIVQVA  QWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRAT+EPVTD+ SFQTEEDIFRFLGLEYIPPHLRWV
Sbjct:  276 LKSHPRNQVCQQLMKVHGVGSRTAKDWYNRGIRSVEDARRTLLPNDDDTEGDEKRPNLKPEVVMGLKHFHDMQ--VPIGRDEVVGIADEVREEAERFGRERDPEGTLLFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVEALRALDGYLVEGEQIVGAEVKAFEDLEYFFV----EGLKERLMERGKLCATLYQGQMGGFTKAKGGQAPQPKLEREEVLMALWQLPGRKCRIDIVQVASSQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRATDEPVTDIVSFQTEEDIFRFLGLEYIPPHLRWV 587          
BLAST of mRNA_E_fasciculatus_S2_contig9249.17306.1 vs. uniprot
Match: A0A6H5JIS2_9PHAE (DNA_pol_B_thumb domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIS2_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 2.430e-58
Identity = 90/94 (95.74%), Postives = 92/94 (97.87%), Query Frame = 0
Query:  225 MALWQLPGRKCRIDIVQVALPQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRATEEPVTDVASFQTEEDIFRFLGLEYIPPHLRWV 318
            MALWQLPGRKCRIDIVQVA PQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRAT+EPVTD+ SFQTEEDIFRFLGLEYIPPHLRWV
Sbjct:    1 MALWQLPGRKCRIDIVQVASPQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRATDEPVTDIVSFQTEEDIFRFLGLEYIPPHLRWV 94          
BLAST of mRNA_E_fasciculatus_S2_contig9249.17306.1 vs. uniprot
Match: A0A6H5JHR4_9PHAE (DNA_pol_lambd_f domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR4_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 6.040e-33
Identity = 63/73 (86.30%), Postives = 69/73 (94.52%), Query Frame = 0
Query:    1 LQSHPRNQVCQQLMKVHGVGSKTAKEWYNRGIRSVEDARSTLLPKDDGTEGDDERPYLKPEVVMGLKHFHDMQ 73
            L+SHPRNQVCQ+LMKVHGVGS+TAK+WYNRGIRSVEDAR TLLP DD TEG+D+RP LKPEVVMGLKHFHDMQ
Sbjct:  698 LKSHPRNQVCQELMKVHGVGSRTAKDWYNRGIRSVEDARRTLLPNDDDTEGEDKRPNLKPEVVMGLKHFHDMQ 770          
BLAST of mRNA_E_fasciculatus_S2_contig9249.17306.1 vs. uniprot
Match: A0A6J0SPZ7_9SAUR (DNA-directed DNA/RNA polymerase mu n=2 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0SPZ7_9SAUR)

HSP 1 Score: 114 bits (285), Expect = 9.760e-25
Identity = 91/317 (28.71%), Postives = 147/317 (46.37%), Query Frame = 0
Query:    1 LQSHPRNQVCQQLMKVHGVGSKTAKEWYNRGIRSVEDARSTLLPKDDGTEGDDERPYLKPEVVMGLKHFHDMQASVPIGRDEVVGIADEVREEAERFGRERDPEGTVLFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVELVRRPQGRDIHPRNRKSTGLPTLDDNVTDKLKHPCQGLKERLTESGKLCATLY-QGQMGGFTKPKAGQTPQPKLEREEVLMALWQLPGRKCRIDIVQVALPQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRATEEPVTDVASFQTEEDIFRFLGLEYIPPHLR 316
            +Q   + Q  +   K+ GVG KTA +WY  G R+++D R                  L  E   GL H+ D+  + P+ R +   I   VRE   +      P  +V   + GGFRRGK + HDVD+L++      E G    V      QG  ++    ++T   +L+D+  +   H          +  + C +++  G + G  +  AG     ++ R       W    +  R+D+V     Q+PFALLGW+G+ +FE+D+RR+   + E K+     T+   E+     A+  +E++IF+ LGLEYIPP  R
Sbjct:  248 IQQSEKFQTMKLFTKIFGVGVKTAHQWYQEGRRTLDDLRGHPA-------------QLSKEQQAGLIHYEDL--NTPVKRADAEAIGQVVREAVNKC----LPSASVT--LTGGFRRGKPSGHDVDLLITHPTEGQEAGLLKKVIACLDQQGFLLYHSIHRNT-FESLEDSDQEPSSHASS------MDQYERCFSIFCLGDLPGDAQEGAGAEKPSRVRRTSGASRFW----KAVRVDLVVTPYSQFPFALLGWTGSRIFERDLRRFA--KREKKMLLNSHTLYHLEQKTWMSAA--SEKEIFQHLGLEYIPPEER 528          
BLAST of mRNA_E_fasciculatus_S2_contig9249.17306.1 vs. uniprot
Match: UPI001CF78DD6 (DNA-directed DNA/RNA polymerase mu isoform X4 n=1 Tax=Varanus komodoensis TaxID=61221 RepID=UPI001CF78DD6)

HSP 1 Score: 112 bits (280), Expect = 2.450e-24
Identity = 94/313 (30.03%), Postives = 148/313 (47.28%), Query Frame = 0
Query:    6 RNQVCQQLMKVHGVGSKTAKEWYNRGIRSVEDARSTLLPKDDGTEGDDERPYLKPEVVMGLKHFHDMQASVPIGRDEVVGIADEVREEAERFGRERDPEGTVLFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVELVRRPQGRDIHPRNRKSTGLPTLDDNVTDKLKHPCQGLKERLTESGKLCATLYQ--GQMGGFTKPKAGQTPQPKLEREEVLMALWQLPGRKCRIDIVQVALPQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRATEEPVTDVASFQTEEDIFRFLGLEYIPPHLR 316
            R Q  +   K+ GVG KTA +WY  G+R+++D +                  L  E   GL H+ D+  S P+ R E   I+  VRE AER+       GT +  + GGFRRGK + HDVD+L++    + E G    +      QG  ++  + ++T  P     +  +      G  +R  +    C ++++   + GG       Q P     R+ V            R+D+V     Q+PFALLGW+G+  FE+D+RR+  +  E K++     +   E+ +   A+  +EE+IF+ LGLEYIPP  R
Sbjct:  176 RYQTMKLFTKMFGVGVKTASQWYQEGLRTLQDLQMRCTK-------------LSREQQAGLLHYTDL--STPVERPEAEAISQLVREVAERY-----LPGTSVT-LTGGFRRGKRSGHDVDLLITHPVESREEGLLSKIISWLHSQGFLLYQNSCRNTFQPFK---MEVQEASGSAGSMDRFEQ----CFSIFRLADRPGGPRGDAGAQKPGASSSRKAV------------RVDLVISPYSQFPFALLGWTGSRNFERDLRRFARQ--EKKMALNSHALYHMEQKIFLPAA--SEEEIFQHLGLEYIPPEER 444          
BLAST of mRNA_E_fasciculatus_S2_contig9249.17306.1 vs. uniprot
Match: A0A8D2KWW6_VARKO (DNA-directed DNA/RNA polymerase mu n=4 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2KWW6_VARKO)

HSP 1 Score: 112 bits (280), Expect = 3.630e-24
Identity = 94/313 (30.03%), Postives = 148/313 (47.28%), Query Frame = 0
Query:    6 RNQVCQQLMKVHGVGSKTAKEWYNRGIRSVEDARSTLLPKDDGTEGDDERPYLKPEVVMGLKHFHDMQASVPIGRDEVVGIADEVREEAERFGRERDPEGTVLFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVELVRRPQGRDIHPRNRKSTGLPTLDDNVTDKLKHPCQGLKERLTESGKLCATLYQ--GQMGGFTKPKAGQTPQPKLEREEVLMALWQLPGRKCRIDIVQVALPQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRATEEPVTDVASFQTEEDIFRFLGLEYIPPHLR 316
            R Q  +   K+ GVG KTA +WY  G+R+++D +                  L  E   GL H+ D+  S P+ R E   I+  VRE AER+       GT +  + GGFRRGK + HDVD+L++    + E G    +      QG  ++  + ++T  P     +  +      G  +R  +    C ++++   + GG       Q P     R+ V            R+D+V     Q+PFALLGW+G+  FE+D+RR+  +  E K++     +   E+ +   A+  +EE+IF+ LGLEYIPP  R
Sbjct:  222 RYQTMKLFTKMFGVGVKTASQWYQEGLRTLQDLQMRCTK-------------LSREQQAGLLHYTDL--STPVERPEAEAISQLVREVAERY-----LPGTSVT-LTGGFRRGKRSGHDVDLLITHPVESREEGLLSKIISWLHSQGFLLYQNSCRNTFQPFK---MEVQEASGSAGSMDRFEQ----CFSIFRLADRPGGPRGDAGAQKPGASSSRKAV------------RVDLVISPYSQFPFALLGWTGSRNFERDLRRFARQ--EKKMALNSHALYHMEQKIFLPAA--SEEEIFQHLGLEYIPPEER 490          
BLAST of mRNA_E_fasciculatus_S2_contig9249.17306.1 vs. uniprot
Match: UPI000E1E930D (DNA-directed DNA/RNA polymerase mu n=1 Tax=Dromaius novaehollandiae TaxID=8790 RepID=UPI000E1E930D)

HSP 1 Score: 108 bits (271), Expect = 2.200e-23
Identity = 89/299 (29.77%), Postives = 134/299 (44.82%), Query Frame = 0
Query:   16 VHGVGSKTAKEWYNRGIRSVEDARSTLLPKDDGTEGDDERPYLKPEVVMGLKHFHDMQASVPIGRDEVVGIADEVREEAERFGRERDPEGTVLFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVELVRRPQGRDIHPRNRKSTGLPTLDDNVTDKLKHPCQGLKERLTESGKLCATLYQGQMGGFTKPKAGQTPQPKLEREEVLMALWQLPGRKCRIDIVQVALPQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRATEEPVTDV-ASFQTEEDIFRFLGLEYIPP 313
            + GVG++TA  WY +G+R+++D R+               P L  +   GL+H+ D+  + P+   E   +A+ VR EA R      P+ TV   + GGFRRGK T HDVD+L+S                         HP   +   L                 L  RL + G L     Q    G  +P  G +   + ER   ++ L     R  R+D+V     Q+ FALLGW+G+  FE+++RR+   Q    LS  G+      +P  ++     +EE+IF+ LGL+YIPP
Sbjct:  153 IFGVGTQTAARWYRQGLRTLDDLRAA-------------GPRLSRQQQAGLRHWEDL--ATPVTLAEAEAVAELVRAEARRV----LPDATVT--LVGGFRRGKPTGHDVDLLLS-------------------------HPEEGRERAL--------------LGPLVARLEQQGLLLYEQSQPNTFGL-EPSGGGSGLDRFERCFAIVRL----ARALRVDMVVAPRGQFAFALLGWTGSRHFERELRRFASHQRGLALSSHGLY-----DPXRELFLPAASEEEIFQLLGLDYIPP 381          
BLAST of mRNA_E_fasciculatus_S2_contig9249.17306.1 vs. uniprot
Match: UPI00112ACE1A (DNA-directed DNA/RNA polymerase mu n=1 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112ACE1A)

HSP 1 Score: 110 bits (274), Expect = 2.660e-23
Identity = 90/311 (28.94%), Postives = 145/311 (46.62%), Query Frame = 0
Query:    6 RNQVCQQLMKVHGVGSKTAKEWYNRGIRSVEDARSTLLPKDDGTEGDDERPYLKPEVVMGLKHFHDMQASVPIGRDEVVGIADEVREEAERFGRERDPEGTVLFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVELVRRPQGRDIHPRNRKSTGLPTLDDNVTDKLK-HPCQ-GLKERLTESGKLCATLYQGQMGGFTKPKAGQ-TPQPKLEREEVLMALWQLPGRKCRIDIVQVALPQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRATEEPVTDVASFQTEEDIFRFLGLEYIPP 313
            R Q  +    + GVG KTA  WY  G+RS+ D R               +  L  E   GL+H+ D+  + P+ R E   IA  + E   RF  E       + ++ GGFRRGK   HDVD+L++  +   E G    ++L+   Q          S GL    D   +  + HP Q  +     +  + C ++++ +   ++K   G  T    L R+      W    +  R+D++   + Q+P+ALLGW+G+  FE+++RR++  + +  L+     +  T +    VAS   EEDIF  LGLE++PP
Sbjct:  236 RYQTMKLFTNIFGVGVKTADNWYQEGLRSLGDLRK-------------HQKKLTQEQEAGLQHYEDL--NTPVSRREADVIAKMIEEATCRFLPE------TVVKLTGGFRRGKPFGHDVDILITHPQEGSEEGL--LIKLISWLQ----------SQGLILYHDLKKNSYQDHPSQRSVSTSAMDHFERCFSIFRLKGQSWSKGDGGAGTHSTDLARDPGAFRDW----KAVRVDLIVAPMSQYPYALLGWTGSKHFERELRRFSFHEKKMVLNSHA--LYDTVQQTFLVAS--REEDIFAHLGLEFVPP 505          
BLAST of mRNA_E_fasciculatus_S2_contig9249.17306.1 vs. uniprot
Match: A0A194S0Q7_RHOGW (DNA polymerase n=1 Tax=Rhodotorula graminis (strain WP1) TaxID=578459 RepID=A0A194S0Q7_RHOGW)

HSP 1 Score: 108 bits (270), Expect = 2.960e-23
Identity = 94/313 (30.03%), Postives = 140/313 (44.73%), Query Frame = 0
Query:    6 RNQVCQQLMKVHGVGSKTAKEWYNRGIRSVEDARSTLLPKDDGTEGDDERPYLKPEVVMGLKHFH-DMQASVPIGRDEVVGIADEVREEAERFGRERDPEGTVLFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVELVRRPQGRDIHPRNRKSTGLPTLDDNVTDKLKHPCQGLKERLTESGKLCATLYQGQMG-GFTKPKAGQTPQPKLEREEVLMALWQLPGRKCRIDIVQVALPQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRATEEPVTDVASFQTEEDIFRFLGLEYIPPHLR 316
            R +V + L  VHGVG   A + Y+ G R+++D ++ L  + D               ++    FH D+Q   P+ R EV  + D VR + ++        G  L E+CGG+RRGK T  D+D+L++F   +G    +GF                     L  L D +  K   P  G    LTE+G    T    +   G T  KA    +           +W+      R+D+V  A P W  A+LGW+G+  FE+D+RR+  +     +   G+  + T E V      +TE D FR L LE+IPPHLR
Sbjct:  124 RFKVLRLLTTVHGVGHALANKLYDDGTRTLDDLQAMLKDRHD---------------ILRYMRFHADLQE--PVSRTEVESVRDFVRLQVDKV-----LPGAHL-ELCGGYRRGKATSGDIDILITFPHQDGL--ERGF---------------------LRRLVDRLVKKGLVPRDGGVLSLTEAGSSRTTWANRRASLGDTLDKALVVFRHPANGTTRTRDVWR------RVDLVVAAWPHWGPAVLGWTGSTQFERDLRRHAGKLCRLHVHSGGIRDKETNEHV----EAKTERDCFRLLKLEWIPPHLR 380          
BLAST of mRNA_E_fasciculatus_S2_contig9249.17306.1 vs. uniprot
Match: A0A6P7XX35_9AMPH (DNA-directed DNA/RNA polymerase mu n=2 Tax=Microcaecilia unicolor TaxID=1415580 RepID=A0A6P7XX35_9AMPH)

HSP 1 Score: 109 bits (273), Expect = 3.420e-23
Identity = 88/310 (28.39%), Postives = 146/310 (47.10%), Query Frame = 0
Query:    6 RNQVCQQLMKVHGVGSKTAKEWYNRGIRSVEDARSTLLPKDDGTEGDDERPYLKPEVVMGLKHFHDMQASVPIGRDEVVGIADEVREEAERFGRERDPEGTVLFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVELVRRPQGRDIHPRNRKSTGLPTLDDNVTDKLKHPCQGLKERLTESGKLCATLYQGQMGGFTKPKAGQTPQPKLEREEVLMALWQLPGRKCRIDIVQVALPQWPFALLGWSGTVMFEKDVRRYTEEQTEYKLSQKGV--TIRATEEPVTDVASFQTEEDIFRFLGLEYIPP 313
            R Q  +    + GVG KTA +WY  G+RS+ D R++            ++  L  +   GL+H+ D+  ++P+   E   IA  V E A RF       GT++  + GGFRRGK + HDVD+L++  +   E G    V    + QG  ++   ++++                     +  +  GK  +++   + G F+  K     Q +     V         +  R+D+V   + Q+PFALLGW+G+  FE+++RR++  + +  L+   +  T++ T    T      +EEDIF  LGLEYIPP
Sbjct:  231 RYQTMKLFTNIFGVGIKTANKWYQEGLRSIGDLRNSQ-----------KKLKLTKQQETGLQHYEDL--TMPVSHTEADLIAKMVEEVAHRF-----LPGTIIT-LAGGFRRGKLSGHDVDILITHPQEGREEGLLSKVISQLQSQGLILYHSLKRNSYY-------------------DASSPGGKSTSSMDHFE-GSFSIFKLKGLSQSRDNGARVHSTDSGRDWKAVRVDLVVTPISQYPFALLGWTGSKHFERELRRFSSHEKKMVLNSHALYDTVQQTFLAAT------SEEDIFMHLGLEYIPP 495          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9249.17306.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNK4_ECTSI1.180e-18382.70DNA polymerase mu n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JIS2_9PHAE2.430e-5895.74DNA_pol_B_thumb domain-containing protein n=1 Tax=... [more]
A0A6H5JHR4_9PHAE6.040e-3386.30DNA_pol_lambd_f domain-containing protein n=1 Tax=... [more]
A0A6J0SPZ7_9SAUR9.760e-2528.71DNA-directed DNA/RNA polymerase mu n=2 Tax=Pogona ... [more]
UPI001CF78DD62.450e-2430.03DNA-directed DNA/RNA polymerase mu isoform X4 n=1 ... [more]
A0A8D2KWW6_VARKO3.630e-2430.03DNA-directed DNA/RNA polymerase mu n=4 Tax=Varanus... [more]
UPI000E1E930D2.200e-2329.77DNA-directed DNA/RNA polymerase mu n=1 Tax=Dromaiu... [more]
UPI00112ACE1A2.660e-2328.94DNA-directed DNA/RNA polymerase mu n=1 Tax=Rhinatr... [more]
A0A194S0Q7_RHOGW2.960e-2330.03DNA polymerase n=1 Tax=Rhodotorula graminis (strai... [more]
A0A6P7XX35_9AMPH3.420e-2328.39DNA-directed DNA/RNA polymerase mu n=2 Tax=Microca... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022312DNA polymerase family XPRINTSPR00869DNAPOLXcoord: 18..35
score: 44.87
coord: 236..245
score: 32.31
coord: 252..265
score: 44.51
coord: 298..316
score: 52.63
IPR002054DNA-directed DNA polymerase XSMARTSM00483polxneu3coord: 2..317
e-value: 2.1E-4
score: -41.3
IPR018944DNA polymerase lambda, fingers domainPFAMPF10391DNA_pol_lambd_fcoord: 11..73
e-value: 6.9E-20
score: 70.6
NoneNo IPR availableGENE3D1.10.150.20coord: 1..73
e-value: 6.3E-14
score: 53.5
NoneNo IPR availablePANTHERPTHR11276DNA POLYMERASE TYPE-X FAMILY MEMBERcoord: 2..316
NoneNo IPR availableSUPERFAMILY81585PsbU/PolX domain-likecoord: 5..73
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 78..317
IPR028207DNA polymerase beta, palm domainPFAMPF14792DNA_pol_B_palmcoord: 78..137
e-value: 7.0E-6
score: 26.2
IPR029398DNA polymerase beta, thumb domainPFAMPF14791DNA_pol_B_thumbcoord: 250..316
e-value: 9.6E-17
score: 60.9
IPR037160DNA polymerase, thumb domain superfamilyGENE3D3.30.210.10coord: 249..316
e-value: 2.2E-21
score: 77.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9249contigE_fasciculatus_S2_contig9249:497..6050 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9249.17306.1mRNA_E_fasciculatus_S2_contig9249.17306.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9249 497..6050 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9249.17306.1 ID=prot_E_fasciculatus_S2_contig9249.17306.1|Name=mRNA_E_fasciculatus_S2_contig9249.17306.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=319bp
LQSHPRNQVCQQLMKVHGVGSKTAKEWYNRGIRSVEDARSTLLPKDDGTE
GDDERPYLKPEVVMGLKHFHDMQASVPIGRDEVVGIADEVREEAERFGRE
RDPEGTVLFEVCGGFRRGKETLHDVDVLVSFRRGNGEPGHQGFVELVRRP
QGRDIHPRNRKSTGLPTLDDNVTDKLKHPCQGLKERLTESGKLCATLYQG
QMGGFTKPKAGQTPQPKLEREEVLMALWQLPGRKCRIDIVQVALPQWPFA
LLGWSGTVMFEKDVRRYTEEQTEYKLSQKGVTIRATEEPVTDVASFQTEE
DIFRFLGLEYIPPHLRWV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037160DNA_Pol_thumb_sf
IPR029398PolB_thumb
IPR028207DNA_pol_B_palm_palm
IPR018944DNA_pol_lambd_fingers_domain
IPR002054DNA-dir_DNA_pol_X
IPR022312DNA_pol_X