prot_E_fasciculatus_S2_contig9240.17301.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9240.17301.1
Unique Nameprot_E_fasciculatus_S2_contig9240.17301.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length225
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig9240.17301.1 vs. uniprot
Match: D7FKD2_ECTSI (Coiled-coil domain 6-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD2_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 8.940e-36
Identity = 83/98 (84.69%), Postives = 83/98 (84.69%), Query Frame = 0 
Query:    1 MQENAPASGGSTTTAGAVAPVAPALPPVTVSTPTRPASFPSCTTSPGSPELEVSVLRRELLMEKHKNSHLEGELVKLRKSAVEISQQVEAEEECLINR 98
            MQENAPASGG         P    LPPV  STPTRPASFPSCTTSPGSPELEVSVLRRELLMEKHKNSHLEGELVKLRKSAVEISQQVEAEEECLINR
Sbjct:    1 MQENAPASGGXXXXXXXXPP----LPPV--STPTRPASFPSCTTSPGSPELEVSVLRRELLMEKHKNSHLEGELVKLRKSAVEISQQVEAEEECLINR 92
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9240.17301.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKD2_ECTSI8.940e-3684.69Coiled-coil domain 6-like protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 101..157
NoneNo IPR availableCOILSCoilCoilcoord: 159..179
NoneNo IPR availableCOILSCoilCoilcoord: 188..222
IPR019152Protein of unknown function DUF2046PFAMPF09755DUF2046coord: 52..170
e-value: 1.9E-22
score: 79.9
coord: 164..213
e-value: 1.4E-8
score: 34.3
IPR019152Protein of unknown function DUF2046PANTHERPTHR15276H4 D10S170 PROTEIN-RELATEDcoord: 164..213
coord: 52..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9240contigE_fasciculatus_S2_contig9240:1129..5966 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9240.17301.1mRNA_E_fasciculatus_S2_contig9240.17301.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9240 1129..5966 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9240.17301.1 ID=prot_E_fasciculatus_S2_contig9240.17301.1|Name=mRNA_E_fasciculatus_S2_contig9240.17301.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=225bp
MQENAPASGGSTTTAGAVAPVAPALPPVTVSTPTRPASFPSCTTSPGSPE
LEVSVLRRELLMEKHKNSHLEGELVKLRKSAVEISQQVEAEEECLINRVS
SRKMMKRLMELKKEKEDLALEVEREEELLTNTLQKKLNQLRQEKVDLENQ
LEREQEYVVNKLRKQLAQVTADKERMAMEVEREEEFLTNKLVKKLDQLKE
EKAAVEEQLAQEKGEVKAVTAEKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019152DUF2046