prot_E_fasciculatus_S2_contig886.16958.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig886.16958.1
Unique Name	prot_E_fasciculatus_S2_contig886.16958.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	170

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig886.16958.1 vs. uniprot
Match: A0A6H5L288_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L288_9PHAE)

HSP 1 Score: 325 bits (832), Expect = 3.000e-110
Identity = 157/164 (95.73%), Postives = 160/164 (97.56%), Query Frame = 0

Query:    2 AHLAVVASWKAGVGYLLGSILLGWGVYLQAHRWGRRWRVSRKAVDWAKRGPLWMCKGAEKTALVAAVAAMAWGGWMAGQHPHKLGWGVIMAVIGGIIGNWFSALNGGAEGRIVWGDWRCNALSFAGVITAGRYAASLEPEEREATLESAFFVALVAQGFGTISG 165
            AHLAVVAS +AGVGYLL SILLGWGVYLQAHRWGRRWRVSRKAVDWAKRGPLWMCKGAEKTALVAAVAAMAWG WMAGQHPHKLGWG+IMAV+GGIIGNWFS LNGGAEGRIVWGDWRCNALSFAGVITAGRYAASLEPEEREATLESAFFVALVAQGFGTISG
Sbjct:   90 AHLAVVASLEAGVGYLLVSILLGWGVYLQAHRWGRRWRVSRKAVDWAKRGPLWMCKGAEKTALVAAVAAMAWGSWMAGQHPHKLGWGIIMAVMGGIIGNWFSTLNGGAEGRIVWGDWRCNALSFAGVITAGRYAASLEPEEREATLESAFFVALVAQGFGTISG 253

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig886.16958.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig886.16958.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5L288_9PHAE	3.000e-110	95.73	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 62..79
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 80..84
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 30..61
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..29
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 85..102
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 103..170
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	TMHMM	TMhelix		coord: 63..80
None	No IPR available	TMHMM	TMhelix		coord: 85..104
None	No IPR available	TMHMM	TMhelix		coord: 10..29

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig886	contig	E_fasciculatus_S2_contig886:22338..25219 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig886.16958.1	mRNA_E_fasciculatus_S2_contig886.16958.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig886 22338..25219 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig886.16958.1 ID=prot_E_fasciculatus_S2_contig886.16958.1|Name=mRNA_E_fasciculatus_S2_contig886.16958.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=170bp
AAHLAVVASWKAGVGYLLGSILLGWGVYLQAHRWGRRWRVSRKAVDWAKR
GPLWMCKGAEKTALVAAVAAMAWGGWMAGQHPHKLGWGVIMAVIGGIIGN
WFSALNGGAEGRIVWGDWRCNALSFAGVITAGRYAASLEPEEREATLESA
FFVALVAQGFGTISGEMERV