prot_E_fasciculatus_S2_contig884.16935.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig884.16935.1
Unique Nameprot_E_fasciculatus_S2_contig884.16935.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length238
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig884.16935.1 vs. uniprot
Match: A0A835YNW1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNW1_9STRA)

HSP 1 Score: 143 bits (360), Expect = 2.680e-36
Identity = 84/203 (41.38%), Postives = 124/203 (61.08%), Query Frame = 0 
Query:   15 QQVFLEDLTLVIDVSLMLAFATAIYLLRQKLITVATLAHALSVSLMVLTVGHYFERHLIGDMDGVEDLVRRHRSGRKGGAGGRWFSGWSSAALVSAAAVLLLVLRFWHCKRGGVDCIVGESAPVHYRCKVRRLRFFAPVFSATVVFVYLCIGARLNALLGGSVLHPKGGGYALAVLTSPTLLSTLCISGCASVLLYAILIEEQ 217
            QQV LEDL+ +ID  ++LA  TA+Y LR++ +++ TL +ALS++L+  TVGHY E+H+ G+  G++DLV  + S   G          S + LV AA++  L+     C+    DCI GE A  H++CKV RLR    V+ ++  F++     R+NA++GGSVLHP+GGG ALAVL SP L + +    C    L+A L + Q
Sbjct:    6 QQVLLEDLSALIDGVILLACVTALYSLRRQELSLCTLTYALSLALLTATVGHYLEQHVFGEA-GIQDLVL-YPSRSAGSV--------SVSLLVCAASIGALMCSLTRCQPLSFDCIAGEYAMTHHQCKVHRLRHALRVWLSSAAFLWAAAALRMNAVVGGSVLHPRGGGCALAVLRSPELAACVVAGACGGAWLHAQLAQVQ 198
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig884.16935.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YNW1_9STRA2.680e-3641.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 69..97
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 185..213
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..21
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..118
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..173
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 214..238
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 22..41
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 119..148
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..68
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 174..184
NoneNo IPR availableTMHMMTMhelixcoord: 98..120
NoneNo IPR availableTMHMMTMhelixcoord: 46..68
NoneNo IPR availableTMHMMTMhelixcoord: 150..172
NoneNo IPR availableTMHMMTMhelixcoord: 22..41
NoneNo IPR availableTMHMMTMhelixcoord: 192..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig884contigE_fasciculatus_S2_contig884:2929..4855 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig884.16935.1mRNA_E_fasciculatus_S2_contig884.16935.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig884 2929..4855 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig884.16935.1 ID=prot_E_fasciculatus_S2_contig884.16935.1|Name=mRNA_E_fasciculatus_S2_contig884.16935.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=238bp
MSGNPHHDSSFSPTQQVFLEDLTLVIDVSLMLAFATAIYLLRQKLITVAT
LAHALSVSLMVLTVGHYFERHLIGDMDGVEDLVRRHRSGRKGGAGGRWFS
GWSSAALVSAAAVLLLVLRFWHCKRGGVDCIVGESAPVHYRCKVRRLRFF
APVFSATVVFVYLCIGARLNALLGGSVLHPKGGGYALAVLTSPTLLSTLC
ISGCASVLLYAILIEEQVLTPNDHSRGNTTSTLPQPQD
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