prot_E_fasciculatus_S2_contig8798.16892.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig8798.16892.1
Unique Name	prot_E_fasciculatus_S2_contig8798.16892.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	180

Homology

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig8798.16892.1 vs. uniprot
Match: D7FGU8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGU8_ECTSI)

HSP 1 Score: 328 bits (841), Expect = 1.520e-104
Identity = 164/181 (90.61%), Postives = 172/181 (95.03%), Query Frame = 0

Query:    1 MKLSEMFHPEREKQAPFFLSQQGRAQLASGQRACKPWDVAYVGDPMYRPRRAWELKALIALWVGLSELVNSRWLGWSTP--EDGEGSRGSGTDSVFDDEGSGKAIAQGKDFQRRIWREVRWAGLPCRVNLRPLADVRATVGLGVALYVLWLAYSLSSVCGACVTVILVALVVRLSTMTMDY 179
            MKLSEMFHPEREKQAP+FLSQQGR QLASGQRACKPWDVAYVGDPMYRPRRAWE++ALIALWVGLSELVNSRWLGWSTP  E G+ SRGSG+DSVFDDEGSGKAI QGKDFQRR+WREVRWAGLPCRVNLRPLADVRATVGLGVALYVLWLAY LSSVCGACVTV+L ALVVRLSTMT +Y
Sbjct:  703 MKLSEMFHPEREKQAPYFLSQQGRTQLASGQRACKPWDVAYVGDPMYRPRRAWEMEALIALWVGLSELVNSRWLGWSTPDREGGDSSRGSGSDSVFDDEGSGKAIVQGKDFQRRVWREVRWAGLPCRVNLRPLADVRATVGLGVALYVLWLAYRLSSVCGACVTVVLGALVVRLSTMTTEY 883

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig8798.16892.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig8798.16892.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FGU8_ECTSI	1.520e-104	90.61	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024129	Sphingomyelin phosphodiesterase 4	PANTHER	PTHR12988	FAMILY NOT NAMED	coord: 19..170
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..54
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 171..179
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 55..74
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 145..170
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 75..144
None	No IPR available	TMHMM	TMhelix		coord: 148..170

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig8798	contig	E_fasciculatus_S2_contig8798:38..3247 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig8798.16892.1	mRNA_E_fasciculatus_S2_contig8798.16892.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig8798 7..4277 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig8798.16892.1 ID=prot_E_fasciculatus_S2_contig8798.16892.1|Name=mRNA_E_fasciculatus_S2_contig8798.16892.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=180bp
MKLSEMFHPEREKQAPFFLSQQGRAQLASGQRACKPWDVAYVGDPMYRPR
RAWELKALIALWVGLSELVNSRWLGWSTPEDGEGSRGSGTDSVFDDEGSG
KAIAQGKDFQRRIWREVRWAGLPCRVNLRPLADVRATVGLGVALYVLWLA
YSLSSVCGACVTVILVALVVRLSTMTMDY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR024129	Sphingomy_SMPD4