prot_E_fasciculatus_S2_contig8446.16578.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig8446.16578.1
Unique Name	prot_E_fasciculatus_S2_contig8446.16578.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	153

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig8446.16578.1 vs. uniprot
Match: D7FYM8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM8_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 2.480e-81
Identity = 124/162 (76.54%), Postives = 130/162 (80.25%), Query Frame = 0

Query:    1 QARLCIALSIVIHTISLFVEGWFWAWQRNAAFGAVAVGGLVLCIYDQYMYAIGGIGFAVCALFDLFAVLRWITGDDD--------------TTAFWYALPPFLGAITMGLGASFSFTAVLFWEDGDGTAVPHEIKSVELGLAPPAAHPWTPSLAYDQQSPTP 148
            +ARLCIALSIVIHTISLFVEGW+W WQRNAAFG  AVGGLVLCIYDQYMYAIGG+GFAVCALFDLFAVLRWIT DD+              TTA WYALPP LGAITMGLGA FSFTAV FWEDGD TA+PHE K+VELGLAP AAHP  P  AY  QSP P
Sbjct:   13 KARLCIALSIVIHTISLFVEGWYWPWQRNAAFGVFAVGGLVLCIYDQYMYAIGGVGFAVCALFDLFAVLRWITDDDNIVEGDDSFDGSSEGTTALWYALPPLLGAITMGLGAIFSFTAVFFWEDGDCTAMPHEGKTVELGLAPIAAHPGAPPRAYYPQSPHP 174

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BLAST of mRNA_E_fasciculatus_S2_contig8446.16578.1 vs. uniprot
Match: A0A6H5JWS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS2_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 1.410e-47
Identity = 87/180 (48.33%), Postives = 105/180 (58.33%), Query Frame = 0

Query:    2 ARLCIALSIVIHTISLFVEGWFWAWQRNAAFGAVAVGGLVLCIYDQYMYAIGGIGFAVCALFDLFAVLRWITGDDD-------------------------TTAFWYALPPFLGAITMGLGASFSFTAVLFWEDGDGTAVPH-------------------EIKSVELGLAPPAAHPWTP 137
            AR C  LSIVIH IS ++ G F+ WQRNA F A  +GGL+LC Y++YMY IG +GFA+CA+FD+ AVLRWIT DD+                         T   W A+PPFLGAI MGLGA F+FTA+  W+ G GTA+PH                   E K+ ELGLAPP AHP TP
Sbjct:   39 ARGCAILSIVIHAISFYLGGGFFVWQRNACFIAFVMGGLLLCFYERYMYVIGSLGFALCAVFDVLAVLRWITRDDEIFDSDDDYNTTFQVDDTQSEESSDSTILLWLAVPPFLGAIAMGLGAIFTFTAIFAWKYGGGTAIPHVPVAPQPTFDFTKQPQSQQESKTAELGLAPPTAHPRTP 218

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BLAST of mRNA_E_fasciculatus_S2_contig8446.16578.1 vs. uniprot
Match: A0A6H5KAL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAL4_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 5.860e-24
Identity = 53/140 (37.86%), Postives = 74/140 (52.86%), Query Frame = 0

Query:    1 QARLCIALSIVIHTISLFVEGWFWAWQRNAAFGAVAVGGLVLCIYDQYMYAIGGIGFAVCALFDLFAVLRWIT-------------------------GDDDTTAFWYALPPFLGAITMGLGASFSFTAVLFWEDGDGTA 115
            QAR C   +I++H  +L V GW W WQ  A+  A  + G++LC+YD+  Y  GGI FAV A+FD+  ++ WI                           D      W+AL PFLGA+++GLGA FSFT++ FW+D    A
Sbjct:    8 QARACAICAIIVHVGALLVFGWLWVWQWIASVLAFIMCGVLLCMYDRCAYITGGICFAVAAVFDILVLVGWIAIYNNLQDDYYXXXXXXXXXXXDGEWEDWKNVILWFALLPFLGALSLGLGAVFSFTSLCFWKDAGSPA 147

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig8446.16578.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig8446.16578.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FYM8_ECTSI	2.480e-81	76.54	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A6H5JWS2_9PHAE	1.410e-47	48.33	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KAL4_9PHAE	5.860e-24	37.86	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 84..108
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 5..24
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 109..152
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 25..29
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 30..45
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..4
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 73..83
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 46..51
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 52..72
None	No IPR available	TMHMM	TMhelix		coord: 81..103
None	No IPR available	TMHMM	TMhelix		coord: 47..69
None	No IPR available	TMHMM	TMhelix		coord: 5..27

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig8446	contig	E_fasciculatus_S2_contig8446:3433..5548 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig8446.16578.1	mRNA_E_fasciculatus_S2_contig8446.16578.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig8446 3433..5548 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig8446.16578.1 ID=prot_E_fasciculatus_S2_contig8446.16578.1|Name=mRNA_E_fasciculatus_S2_contig8446.16578.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=153bp
QARLCIALSIVIHTISLFVEGWFWAWQRNAAFGAVAVGGLVLCIYDQYMY
AIGGIGFAVCALFDLFAVLRWITGDDDTTAFWYALPPFLGAITMGLGASF
SFTAVLFWEDGDGTAVPHEIKSVELGLAPPAAHPWTPSLAYDQQSPTPAY
RG*