prot_E_fasciculatus_S2_contig8369.16501.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig8369.16501.1
Unique Name	prot_E_fasciculatus_S2_contig8369.16501.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	124

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig8369.16501.1 vs. uniprot
Match: D7FUD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD8_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 1.850e-19
Identity = 57/124 (45.97%), Postives = 79/124 (63.71%), Query Frame = 0

Query:    3 LPVASLFLSWSIPASLAVLLSVFMIV---RGVSQRIAAHVVPLHVAESAILHRTGERSAGHVRRAGILLSINLDNDNETWTILMAVHRFIQLSSAT-------DQGHVLGDLYVEVTSSGSTDV 116
            L VA+L   W+IPASL+V+  +F+++   R V  R AA V    +A SA++   GER AG   RA + +S+NLD+D ETW  LMAV+RF+  +  T        +G+VLGDL V++ SSGSTDV
Sbjct:  422 LAVAALRPLWNIPASLSVVSGMFLMLLHLRSVRPRAAARVAEGRIAGSALIRGAGERRAGRASRAMLFVSLNLDSDGETWARLMAVYRFVLSTGGTVPRGDGPGEGYVLGDLEVDIRSSGSTDV 545

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig8369.16501.1 vs. uniprot
Match: D7FJL7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJL7_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 9.690e-15
Identity = 41/72 (56.94%), Postives = 52/72 (72.22%), Query Frame = 0

Query:   52 RTGERSAGHVRRAGILLSINLDNDNETWTILMAVHRFI-------QLSSATDQGHVLGDLYVEVTSSGSTDV 116
            R+GER  G   R+ ILLS+NLDN++ETWT LMAVHR++       +LS    +GHV GDL+VE TSSGSTD+
Sbjct:  389 RSGERRVGRGGRSAILLSLNLDNEDETWTRLMAVHRWLLSRGGTNRLSQGPSRGHVFGDLHVEATSSGSTDM 460

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig8369.16501.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig8369.16501.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FUD8_ECTSI	1.850e-19	45.97	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FJL7_ECTSI	9.690e-15	56.94	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..28
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 29..124
None	No IPR available	TMHMM	TMhelix		coord: 5..27

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig8369	contig	E_fasciculatus_S2_contig8369:3321..4599 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig8369.16501.1	mRNA_E_fasciculatus_S2_contig8369.16501.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig8369 3180..4599 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig8369.16501.1 ID=prot_E_fasciculatus_S2_contig8369.16501.1|Name=mRNA_E_fasciculatus_S2_contig8369.16501.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=124bp
MPLPVASLFLSWSIPASLAVLLSVFMIVRGVSQRIAAHVVPLHVAESAIL
HRTGERSAGHVRRAGILLSINLDNDNETWTILMAVHRFIQLSSATDQGHV
LGDLYVEVTSSGSTDVSTGGYLLS