prot_E_fasciculatus_S2_contig8369.16501.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8369.16501.1
Unique Nameprot_E_fasciculatus_S2_contig8369.16501.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length124
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8369.16501.1 vs. uniprot
Match: D7FUD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD8_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 1.850e-19
Identity = 57/124 (45.97%), Postives = 79/124 (63.71%), Query Frame = 0 
Query:    3 LPVASLFLSWSIPASLAVLLSVFMIV---RGVSQRIAAHVVPLHVAESAILHRTGERSAGHVRRAGILLSINLDNDNETWTILMAVHRFIQLSSAT-------DQGHVLGDLYVEVTSSGSTDV 116
            L VA+L   W+IPASL+V+  +F+++   R V  R AA V    +A SA++   GER AG   RA + +S+NLD+D ETW  LMAV+RF+  +  T        +G+VLGDL V++ SSGSTDV
Sbjct:  422 LAVAALRPLWNIPASLSVVSGMFLMLLHLRSVRPRAAARVAEGRIAGSALIRGAGERRAGRASRAMLFVSLNLDSDGETWARLMAVYRFVLSTGGTVPRGDGPGEGYVLGDLEVDIRSSGSTDV 545
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BLAST of mRNA_E_fasciculatus_S2_contig8369.16501.1 vs. uniprot
Match: D7FJL7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJL7_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 9.690e-15
Identity = 41/72 (56.94%), Postives = 52/72 (72.22%), Query Frame = 0 
Query:   52 RTGERSAGHVRRAGILLSINLDNDNETWTILMAVHRFI-------QLSSATDQGHVLGDLYVEVTSSGSTDV 116
            R+GER  G   R+ ILLS+NLDN++ETWT LMAVHR++       +LS    +GHV GDL+VE TSSGSTD+
Sbjct:  389 RSGERRVGRGGRSAILLSLNLDNEDETWTRLMAVHRWLLSRGGTNRLSQGPSRGHVFGDLHVEATSSGSTDM 460
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8369.16501.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUD8_ECTSI1.850e-1945.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FJL7_ECTSI9.690e-1556.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 29..124
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8369contigE_fasciculatus_S2_contig8369:3321..4599 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8369.16501.1mRNA_E_fasciculatus_S2_contig8369.16501.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8369 3180..4599 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8369.16501.1 ID=prot_E_fasciculatus_S2_contig8369.16501.1|Name=mRNA_E_fasciculatus_S2_contig8369.16501.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=124bp
MPLPVASLFLSWSIPASLAVLLSVFMIVRGVSQRIAAHVVPLHVAESAIL
HRTGERSAGHVRRAGILLSINLDNDNETWTILMAVHRFIQLSSATDQGHV
LGDLYVEVTSSGSTDVSTGGYLLS
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