prot_E_fasciculatus_S2_contig8032.16197.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig8032.16197.1
Unique Name	prot_E_fasciculatus_S2_contig8032.16197.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	90

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig8032.16197.1 vs. uniprot
Match: A0A6H5J9C4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C4_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 5.480e-8
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 0

Query:   56 DGNADLTDERILANAVLQLSLADRAV-RTNSSPIG 89
            DGNADLTDERILANAVLQLSLADRAV RT+ +PIG
Sbjct: 1269 DGNADLTDERILANAVLQLSLADRAVVRTSGTPIG 1303

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BLAST of mRNA_E_fasciculatus_S2_contig8032.16197.1 vs. uniprot
Match: D7FQW7_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW7_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 7.240e-8
Identity = 31/35 (88.57%), Postives = 32/35 (91.43%), Query Frame = 0

Query:   56 DGNADLTDERILANAVLQLSLADRAV-RTNSSPIG 89
            DGNADLTDERILANAVLQLSLADRAV RT+  PIG
Sbjct:  580 DGNADLTDERILANAVLQLSLADRAVVRTSGGPIG 614

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig8032.16197.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig8032.16197.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5J9C4_9PHAE	5.480e-8	88.57	Protein kinase domain-containing protein n=1 Tax=E...	[more]
D7FQW7_ECTSI	7.240e-8	88.57	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 1..80 e-value: 2.1E-17 score: 65.0
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 2..58 e-value: 1.6E-9 score: 37.3
None	No IPR available	PANTHER	PTHR27000	FAMILY NOT NAMED	coord: 4..63
None	No IPR available	PANTHER	PTHR27000:SF561		coord: 4..63
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 2..59

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig8032	contig	E_fasciculatus_S2_contig8032:3174..5441 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig8032.16197.1	mRNA_E_fasciculatus_S2_contig8032.16197.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig8032 2025..5476 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig8032.16197.1 ID=prot_E_fasciculatus_S2_contig8032.16197.1|Name=mRNA_E_fasciculatus_S2_contig8032.16197.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=90bp
MLTELTIGRNRLTGGIPEELGNLDRLIQLDLSSNYLEGDIPLTLGNLTSL
EYLELDGNADLTDERILANAVLQLSLADRAVRTNSSPIG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001611	Leu-rich_rpt
IPR032675	LRR_dom_sf