prot_E_fasciculatus_S2_contig803.16195.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig803.16195.1
Unique Nameprot_E_fasciculatus_S2_contig803.16195.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length194
Homology
BLAST of mRNA_E_fasciculatus_S2_contig803.16195.1 vs. uniprot
Match: D8LHP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHP2_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 4.810e-53
Identity = 98/102 (96.08%), Postives = 99/102 (97.06%), Query Frame = 0
Query:   81 GASELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKYKVKLTPGKQKRGKASKQAIEVFSRSRDTPASHKGLMKGITDNECVAAMIGDVKVAVAGLAQATQVR 182
            G SELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKYKVKLTPGKQKRGKASKQAIEVFSRSRDTPAS KGLMKGITDNECVAAMIGDVKVAVAGLAQATQ +
Sbjct: 1248 GVSELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKYKVKLTPGKQKRGKASKQAIEVFSRSRDTPASQKGLMKGITDNECVAAMIGDVKVAVAGLAQATQAK 1349          
BLAST of mRNA_E_fasciculatus_S2_contig803.16195.1 vs. uniprot
Match: A0A1E7FRS9_9STRA (DUF814-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRS9_9STRA)

HSP 1 Score: 117 bits (294), Expect = 3.780e-27
Identity = 58/101 (57.43%), Postives = 73/101 (72.28%), Query Frame = 0
Query:   80 DGASELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKYKVKLTPGKQKRGKASKQAIEVFSRSRDTPASHKGLMKGITDNECVAAMIGDVKVAVAGLAQATQ 180
            D  +ELD+LTGKP  ED++LFAVPVC PY SL  Y Y+VKLTPG  KRGKASKQ I++F R    P   +GL+K + DNE V A+ GDVK++ AG ++A Q
Sbjct:  906 DDTAELDKLTGKPLGEDLILFAVPVCAPYQSLSKYAYRVKLTPGNMKRGKASKQCIDMFLRESAVPEHCRGLIKNVADNEWVQAICGDVKISAAGASKAIQ 1006          
BLAST of mRNA_E_fasciculatus_S2_contig803.16195.1 vs. uniprot
Match: A0A061RK70_9CHLO (Nuclear export mediator factor nemf-like n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RK70_9CHLO)

HSP 1 Score: 111 bits (277), Expect = 1.110e-26
Identity = 50/96 (52.08%), Postives = 74/96 (77.08%), Query Frame = 0
Query:   83 SELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKYKVKLTPGKQKRGKASKQAIEVFSRSRDTPASHKGLMKGITDNECVAAMIGDVKVAVAGLAQA 178
            +ELD LTG PR +D+LLFA+PVC PY +L  YKY+VKLTPG+QK+GKA+K+A+++F R  +  +  K L++ +TD E V+ M+G V++++ GLA A
Sbjct:  144 TELDSLTGIPRXDDLLLFAIPVCAPYAALNGYKYRVKLTPGRQKKGKAAKEALDIFGRVNEATSREKELIRAVTDTEAVSGMVGPVQISMPGLAAA 239          
BLAST of mRNA_E_fasciculatus_S2_contig803.16195.1 vs. uniprot
Match: A0A388M4N2_CHABU (CCHC-type domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M4N2_CHABU)

HSP 1 Score: 115 bits (289), Expect = 1.830e-26
Identity = 57/98 (58.16%), Postives = 75/98 (76.53%), Query Frame = 0
Query:   83 SELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKYKVKLTPGKQKRGKASKQAIEVFSRSRDTPASHKGLMKGITDNECVAAMIGDVKVAVAGLAQATQ 180
            +ELD LTG PR++DVLL+AVPVCGPY +L++YKY+VKLTPG  K+GKA++ A+EVF+R+ D     K LMK + + E VA MIG+VKVA  GL +  Q
Sbjct: 1276 TELDSLTGVPREDDVLLYAVPVCGPYSALQNYKYRVKLTPGTVKKGKAARTAVEVFARTVDVSPRQKDLMKAVPETELVAVMIGNVKVAAPGLMKIRQ 1373          
BLAST of mRNA_E_fasciculatus_S2_contig803.16195.1 vs. uniprot
Match: A0A7S2HPI5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HPI5_9STRA)

HSP 1 Score: 106 bits (265), Expect = 3.540e-26
Identity = 50/93 (53.76%), Postives = 70/93 (75.27%), Query Frame = 0
Query:   83 SELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKYKVKLTPGKQKRGKASKQAIEVFSRSRDTPASHKGLMKGITDNECVAAMIGDVKVAVAGL 175
            +EL++LTG P   DV++F VPVCGPY SL+ YKYKVKLTPG  K+G+A KQA++VF+R ++     + L+K ++DNE V  +IG+VKV+  GL
Sbjct:   23 TELNKLTGLPLPSDVIMFCVPVCGPYQSLQRYKYKVKLTPGSTKKGRAGKQALDVFTRMKECSPRERDLIKFVSDNELVQTIIGEVKVSTPGL 115          
BLAST of mRNA_E_fasciculatus_S2_contig803.16195.1 vs. uniprot
Match: UPI000B8CF237 (nuclear export mediator factor NEMF-like n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CF237)

HSP 1 Score: 104 bits (260), Expect = 1.940e-25
Identity = 51/98 (52.04%), Postives = 68/98 (69.39%), Query Frame = 0
Query:   83 SELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKYKVKLTPGKQKRGKASKQAIEVFSRSRDTPASHKGLMKGITDNECVAAMIGDVKVAVAGLAQATQ 180
            +++D LTG P   D+LL+AVPVCGPY +L+ YKY+VK+ PG  K+GKA+K A+ +FS   +     K LMK  TD E VAA+IG+VK+  AGL Q  Q
Sbjct:   23 NDMDYLTGNPLSSDILLYAVPVCGPYSALQSYKYRVKIIPGSAKKGKAAKTAMNLFSHMSEATNREKELMKACTDPELVAAIIGNVKITAAGLTQLKQ 120          
BLAST of mRNA_E_fasciculatus_S2_contig803.16195.1 vs. uniprot
Match: A0A5J4XG72_9CHLO (Nuclear export mediator factor NEMF (Fragment) n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XG72_9CHLO)

HSP 1 Score: 110 bits (274), Expect = 4.510e-25
Identity = 52/101 (51.49%), Postives = 73/101 (72.28%), Query Frame = 0
Query:   80 DGASELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKYKVKLTPGKQKRGKASKQAIEVFSRSRDTPASHKGLMKGITDNECVAAMIGDVKVAVAGLAQATQ 180
            D  ++LD LTG PR +DVLLFAVPVC PY +L+ YKYK+KLTPG Q++GKA++QA+E+ SR  DTP   K  +K + D + + A +G VK+++ GL +  Q
Sbjct:  302 DRLTQLDSLTGVPRPDDVLLFAVPVCAPYSALQGYKYKLKLTPGTQRKGKAARQAVELLSRQPDTPVREKDFIKAVPDMDMINAFVGTVKLSMPGLVKIKQ 402          
BLAST of mRNA_E_fasciculatus_S2_contig803.16195.1 vs. uniprot
Match: A0A314ZFJ4_PRUYE (Nuclear export mediator factor Nemf n=1 Tax=Prunus yedoensis var. nudiflora TaxID=2094558 RepID=A0A314ZFJ4_PRUYE)

HSP 1 Score: 107 bits (267), Expect = 4.680e-24
Identity = 55/111 (49.55%), Postives = 75/111 (67.57%), Query Frame = 0
Query:   83 SELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKYKVKLTPGKQKRGKASKQAIEVFSRSRDTPASHKGLMKGITDNECVAAMIGDVKVAVAGLAQATQVRFSIISRSASAG 193
            +++D LTG P   D+LL+AVPVCGPY S++ YKY+VK+TPG  KRGKA+K A+ +FS   +     K LMK  TD E VAA+IG+VK+  AGL Q  Q +  +   ++ AG
Sbjct:  305 NDVDYLTGNPLPSDILLYAVPVCGPYSSVQSYKYRVKITPGSVKRGKAAKTAMNLFSHMTEATVREKELMKACTDPELVAAIIGNVKITSAGLTQLKQKQKKVKKSNSKAG 415          
BLAST of mRNA_E_fasciculatus_S2_contig803.16195.1 vs. uniprot
Match: A0A218XUR9_PUNGR (CCHC-type domain-containing protein n=4 Tax=Punica granatum TaxID=22663 RepID=A0A218XUR9_PUNGR)

HSP 1 Score: 107 bits (268), Expect = 1.160e-23
Identity = 53/98 (54.08%), Postives = 72/98 (73.47%), Query Frame = 0
Query:   83 SELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKYKVKLTPGKQKRGKASKQAIEVFSRSRDTPASHKGLMKGITDNECVAAMIGDVKVAVAGLAQATQ 180
            +++D LTG P   D+LL+AVPVCGPY +L+ YKY+VK+TPG  K+GKA+K A+ +FS   +  +  K LMK  TD E VAA+IG+VKV+ AGL+Q  Q
Sbjct: 1026 NDVDYLTGNPLPSDILLYAVPVCGPYNALQSYKYRVKITPGTAKKGKAAKMAMNLFSHMPEATSREKELMKACTDPELVAAIIGNVKVSAAGLSQLKQ 1123          
BLAST of mRNA_E_fasciculatus_S2_contig803.16195.1 vs. uniprot
Match: A0A6U1AHC6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1AHC6_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.170e-23
Identity = 53/97 (54.64%), Postives = 74/97 (76.29%), Query Frame = 0
Query:   84 ELDRLTGKPRDEDVLLFAVPVCGPYMSLRDYKYKVKLTPGKQKRGKASKQAIEVFSRSRDTPASHKGLMKGITDNECVAAMIGDVKVAVAGLAQATQ 180
            +L+RLTG P  +DVLLF +PVC PY SL  YK++VKLTPG QK+GKA KQ+++VF RS++  +  + L++ ++DNE V ++IGDVKV+  GL QA Q
Sbjct: 1110 DLNRLTGVPHVDDVLLFCIPVCAPYQSLNGYKFRVKLTPGTQKKGKAGKQSMDVFQRSKECTSRERDLIRMVSDNELVHSIIGDVKVSTPGL-QAAQ 1205          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig803.16195.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHP2_ECTSI4.810e-5396.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1E7FRS9_9STRA3.780e-2757.43DUF814-domain-containing protein n=1 Tax=Fragilari... [more]
A0A061RK70_9CHLO1.110e-2652.08Nuclear export mediator factor nemf-like n=1 Tax=T... [more]
A0A388M4N2_CHABU1.830e-2658.16CCHC-type domain-containing protein n=1 Tax=Chara ... [more]
A0A7S2HPI5_9STRA3.540e-2653.76Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
UPI000B8CF2371.940e-2552.04nuclear export mediator factor NEMF-like n=1 Tax=C... [more]
A0A5J4XG72_9CHLO4.510e-2551.49Nuclear export mediator factor NEMF (Fragment) n=1... [more]
A0A314ZFJ4_PRUYE4.680e-2449.55Nuclear export mediator factor Nemf n=1 Tax=Prunus... [more]
A0A218XUR9_PUNGR1.160e-2354.08CCHC-type domain-containing protein n=4 Tax=Punica... [more]
A0A6U1AHC6_9STRA1.170e-2354.64Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 44..64
NoneNo IPR availablePANTHERPTHR15239:SF6NUCLEAR EXPORT MEDIATOR FACTOR NEMFcoord: 6..180
NoneNo IPR availablePANTHERPTHR15239UNCHARACTERIZEDcoord: 6..180
IPR021846NFACT protein, C-terminalPFAMPF11923NFACT-Ccoord: 82..170
e-value: 6.8E-27
score: 93.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig803contigE_fasciculatus_S2_contig803:44..1377 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig803.16195.1mRNA_E_fasciculatus_S2_contig803.16195.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig803 44..1377 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig803.16195.1 ID=prot_E_fasciculatus_S2_contig803.16195.1|Name=mRNA_E_fasciculatus_S2_contig803.16195.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=194bp
AGGGIGSDGDKADSRSGEKAGEHGGDGEQRDASGLDAQEEEEPLSRRAQK
KREEEEVRKLLEEEGAGGEDFDGGGGGGGDGASELDRLTGKPRDEDVLLF
AVPVCGPYMSLRDYKYKVKLTPGKQKRGKASKQAIEVFSRSRDTPASHKG
LMKGITDNECVAAMIGDVKVAVAGLAQATQVRFSIISRSASAGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021846NFACT-C