prot_E_fasciculatus_S2_contig7965.16119.1 (polypeptide) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7965.16119.1 vs. uniprot
Match: D8LJI3_ECTSI (U6 snRNA-associated Sm-like protein LSm5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJI3_ECTSI) HSP 1 Score: 171 bits (432), Expect = 2.440e-53 Identity = 84/85 (98.82%), Postives = 85/85 (100.00%), Query Frame = 0
Query: 33 MAARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEIDADGTKRRIQLDQILLNGNNVAMLVPGGSPEDT 117
MAARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYE+DADGTKRRIQLDQILLNGNNVAMLVPGGSPEDT
Sbjct: 1 MAARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEVDADGTKRRIQLDQILLNGNNVAMLVPGGSPEDT 85
BLAST of mRNA_E_fasciculatus_S2_contig7965.16119.1 vs. uniprot
Match: A0A835ZDD9_9STRA (U6 snRNA-associated Sm-like protein LSm5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDD9_9STRA) HSP 1 Score: 149 bits (376), Expect = 8.180e-45 Identity = 69/83 (83.13%), Postives = 80/83 (96.39%), Query Frame = 0
Query: 33 MAARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEIDADGTKRRIQLDQILLNGNNVAMLVPGGSPE 115
MA RL+PLELIDKCIGS+LWIIMKGDKELVGTLRGFDDYVNMVL+DVTEYE+DA+G +R ++L+QILLNGNNVA+LVPGGSP+
Sbjct: 1 MAGRLMPLELIDKCIGSKLWIIMKGDKELVGTLRGFDDYVNMVLEDVTEYEVDAEGVRREVKLEQILLNGNNVALLVPGGSPD 83
BLAST of mRNA_E_fasciculatus_S2_contig7965.16119.1 vs. uniprot
Match: A0A067CXC5_SAPPC (U6 snRNA-associated Sm-like protein LSm5 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CXC5_SAPPC) HSP 1 Score: 139 bits (349), Expect = 1.230e-40 Identity = 66/80 (82.50%), Postives = 74/80 (92.50%), Query Frame = 0
Query: 36 RLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEIDADGTKRRIQLDQILLNGNNVAMLVPGGSPE 115
RLLPLELIDKCIGSR+WIIMKGDKE VGTLRGFDDYVNMVLDDVTEYE+ +G KR++ +DQ+LLNGNNV +LVPGGSPE
Sbjct: 5 RLLPLELIDKCIGSRMWIIMKGDKEFVGTLRGFDDYVNMVLDDVTEYEVTPEG-KRKVHVDQVLLNGNNVCLLVPGGSPE 83
BLAST of mRNA_E_fasciculatus_S2_contig7965.16119.1 vs. uniprot
Match: A0A7S4M2I3_9EUKA (U6 snRNA-associated Sm-like protein LSm5 n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4M2I3_9EUKA) HSP 1 Score: 138 bits (348), Expect = 2.590e-40 Identity = 71/99 (71.72%), Postives = 82/99 (82.83%), Query Frame = 0
Query: 18 ASAPATAVLPQGG--RKMAARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEIDADGTKRRIQLDQILLNGNNVAMLVPGGSP 114
ASAP QG R +++LPLELIDKCIGS++W+IM+GDKE+VGTLRGFDDYVNMVL+DVTEYEI ADG KR +LDQILLNGNNVA+LVPGG P
Sbjct: 2 ASAPPRRPRSQGSKPRDTMSQVLPLELIDKCIGSKMWVIMRGDKEIVGTLRGFDDYVNMVLEDVTEYEITADG-KRTTKLDQILLNGNNVALLVPGGDP 99
BLAST of mRNA_E_fasciculatus_S2_contig7965.16119.1 vs. uniprot
Match: A0A024UWN5_9STRA (U6 snRNA-associated Sm-like protein LSm5 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UWN5_9STRA) HSP 1 Score: 137 bits (344), Expect = 6.920e-40 Identity = 65/81 (80.25%), Postives = 75/81 (92.59%), Query Frame = 0
Query: 36 RLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEIDADGTKRRIQLDQILLNGNNVAMLVPGGSPED 116
RLLPLELIDKCIGSR+WIIMKGDKE VGTLRGFDDYVNMVLDDV EYEI +G KR++++DQ+LLNGNNV +LVPGG+PE+
Sbjct: 6 RLLPLELIDKCIGSRIWIIMKGDKEFVGTLRGFDDYVNMVLDDVIEYEITPEG-KRKVKVDQVLLNGNNVCLLVPGGNPEE 85
BLAST of mRNA_E_fasciculatus_S2_contig7965.16119.1 vs. uniprot
Match: K3W4W8_GLOUD (U6 snRNA-associated Sm-like protein LSm5 n=13 Tax=Oomycota TaxID=4762 RepID=K3W4W8_GLOUD) HSP 1 Score: 135 bits (341), Expect = 1.810e-39 Identity = 66/80 (82.50%), Postives = 73/80 (91.25%), Query Frame = 0
Query: 35 ARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEIDADGTKRRIQLDQILLNGNNVAMLVPGGSP 114
+RLLPLELIDKCIGSRLWIIMKGDKE +GTLRGFDDYVNMVLDDVTEYEI +G KR I+LDQ+LLNGNN+ +LVPGG P
Sbjct: 4 SRLLPLELIDKCIGSRLWIIMKGDKEFLGTLRGFDDYVNMVLDDVTEYEITPEG-KREIKLDQVLLNGNNICLLVPGGFP 82
BLAST of mRNA_E_fasciculatus_S2_contig7965.16119.1 vs. uniprot
Match: A0A024G4D3_9STRA (U6 snRNA-associated Sm-like protein LSm5 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G4D3_9STRA) HSP 1 Score: 135 bits (340), Expect = 2.580e-39 Identity = 64/82 (78.05%), Postives = 74/82 (90.24%), Query Frame = 0
Query: 36 RLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEIDADGTKRRIQLDQILLNGNNVAMLVPGGSPEDT 117
R+LPLELIDKCIGSRLWI+M+GDKE VGTLRGFDDYVNMVLDDVTE+E+ G KR+ +LDQ+LLNGNNV ML+PGG PED+
Sbjct: 5 RVLPLELIDKCIGSRLWIVMQGDKEFVGTLRGFDDYVNMVLDDVTEFELTPSG-KRQTELDQVLLNGNNVCMLIPGGMPEDS 85
BLAST of mRNA_E_fasciculatus_S2_contig7965.16119.1 vs. uniprot
Match: A0A7S2SPY3_9STRA (U6 snRNA-associated Sm-like protein LSm5 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPY3_9STRA) HSP 1 Score: 136 bits (342), Expect = 2.870e-39 Identity = 66/84 (78.57%), Postives = 75/84 (89.29%), Query Frame = 0
Query: 32 KMAARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEIDADGTKRRIQLDQILLNGNNVAMLVPGGSPE 115
KM+ + LPL +IDKCIGSRLW+IMKGDKELVGTLRGFDDYVNMVLDDVTEYEI +G KR +L+QILLNGNN+A+LVPGG PE
Sbjct: 23 KMSGKKLPLAIIDKCIGSRLWVIMKGDKELVGTLRGFDDYVNMVLDDVTEYEITPEG-KRATRLEQILLNGNNIALLVPGGDPE 105
BLAST of mRNA_E_fasciculatus_S2_contig7965.16119.1 vs. uniprot
Match: A0A8K1CS49_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CS49_PYTOL) HSP 1 Score: 134 bits (336), Expect = 1.050e-38 Identity = 64/83 (77.11%), Postives = 74/83 (89.16%), Query Frame = 0
Query: 34 AARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEIDADGTKRRIQLDQILLNGNNVAMLVPGGSPED 116
A RLLPLELIDKCIGS++WIIMKGDKE VGTLRGFDDYVNMVLDDVTE+EI +G K+ ++L+Q+LLNGNNV +LVPGG P D
Sbjct: 3 AGRLLPLELIDKCIGSQIWIIMKGDKEFVGTLRGFDDYVNMVLDDVTEFEITPEG-KKEVKLEQVLLNGNNVCLLVPGGFPSD 84
BLAST of mRNA_E_fasciculatus_S2_contig7965.16119.1 vs. uniprot
Match: A0A7S3BG05_9EUKA (U6 snRNA-associated Sm-like protein LSm5 n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BG05_9EUKA) HSP 1 Score: 134 bits (337), Expect = 1.120e-38 Identity = 65/86 (75.58%), Postives = 76/86 (88.37%), Query Frame = 0
Query: 29 GGRKMAARLLPLELIDKCIGSRLWIIMKGDKELVGTLRGFDDYVNMVLDDVTEYEIDADGTKRRIQLDQILLNGNNVAMLVPGGSP 114
G A++LPLE+IDKCIGSR+W+IM+GDKE+VGTLRGFDDYVNMVL+DVTEYEI A+G KR +LDQILLNGNNVA+LVPGG P
Sbjct: 12 GNAGFMAQVLPLEIIDKCIGSRMWVIMRGDKEIVGTLRGFDDYVNMVLEDVTEYEITAEG-KRVTKLDQILLNGNNVALLVPGGDP 96 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7965.16119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E_fasciculatus_S2_contig7965.16119.1 ID=prot_E_fasciculatus_S2_contig7965.16119.1|Name=mRNA_E_fasciculatus_S2_contig7965.16119.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=118bpback to top |