prot_E_fasciculatus_S2_contig7929.16088.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7929.16088.1
Unique Nameprot_E_fasciculatus_S2_contig7929.16088.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length158
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7929.16088.1 vs. uniprot
Match: D8LHA2_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA2_ECTSI)

HSP 1 Score: 288 bits (736), Expect = 4.270e-96
Identity = 144/161 (89.44%), Postives = 154/161 (95.65%), Query Frame = 0
Query:    1 MEFRRRSATTSLGLAVLGLLAA---AAAQDTASPNDPISKPDCDSDMEVSIRYAGTTQRLYLESADGETRGGCVTLGQIWESRAGKGPLFAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDDGGDADELRLLSTSDTYINLRAHGGSLDFVGTKV 158
            MEFRRRSAT+S GLA+LGLLA+   AAA DTASPNDPISKPDCDSD+EVSIRYAG T+RLYLESADGETRGGC TLGQ+WESRAGKGPL+AVDPDSGDVSET+TGTWLLTEELYVEDGITLKVYGTD+GGDADELRLLSTSDTYINLRA+GGSLDFVGTKV
Sbjct:    1 MEFRRRSATSSFGLALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGNTKRLYLESADGETRGGCATLGQVWESRAGKGPLYAVDPDSGDVSETQTGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSDTYINLRAYGGSLDFVGTKV 161          
BLAST of mRNA_E_fasciculatus_S2_contig7929.16088.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 288 bits (738), Expect = 2.180e-93
Identity = 145/161 (90.06%), Postives = 154/161 (95.65%), Query Frame = 0
Query:    1 MEFRRRSATTSLGLAVLGLLAA---AAAQDTASPNDPISKPDCDSDMEVSIRYAGTTQRLYLESADGETRGGCVTLGQIWESRAGKGPLFAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDDGGDADELRLLSTSDTYINLRAHGGSLDFVGTKV 158
            MEFRR+SAT+S GLA+LGLLA+   AAA DTASPNDPISKPDCDSD+EVSIRYAGTT+RLYLESADGETRGGC TLGQIWESRAGK PL+AVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTD+GGDADELRLLSTS+TYINLRAHGGSLDFVGTKV
Sbjct:    1 MEFRRKSATSSFGLALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKV 161          
BLAST of mRNA_E_fasciculatus_S2_contig7929.16088.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 2.480e-86
Identity = 137/161 (85.09%), Postives = 148/161 (91.93%), Query Frame = 0
Query:    1 MEFRRRSATTSLGLAVLGLLAA---AAAQDTASPNDPISKPDCDSDMEVSIRYAGTTQRLYLESADGETRGGCVTLGQIWESRAGKGPLFAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDDGGDADELRLLSTSDTYINLRAHGGSLDFVGTKV 158
            MEFRR SAT+S  LA+LGLLAA   AAA DTASPNDPISKPDCDSD+ VSIRYA +T+RLYLESADGETRGGCVTLGQIWE+RAGK PL+AVDP+SG+ SE ETGTWLLTEELYVEDGITLKVYGT +GGDADELRLLST+DTYINLRAHGGSLDFVGTKV
Sbjct:    1 MEFRR-SATSSFCLALLGLLAATMRAAAADTASPNDPISKPDCDSDIAVSIRYASSTKRLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKV 160          
BLAST of mRNA_E_fasciculatus_S2_contig7929.16088.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 1.520e-62
Identity = 103/146 (70.55%), Postives = 123/146 (84.25%), Query Frame = 0
Query:   15 AVLGLLAA--AAAQDTASPNDPISKPDCDSDMEVSIRYAGTTQRLYLESADGETRGGCVTLGQIWESRAGKGPLFAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDDGGDADELRLLSTSDTYINLRAHGGSLDFVGTKV 158
            A++G+LA   AA +DT SPN+PI KP+CD  + VSIRY+   +RLYLESAD +TRGGCVTL QIWE + G+ PL+AVD  SGD+S++ TGTWLLTEEL+VEDGITLKV+GT  GGDADELRLLSTSDT+INLRAHGGSLDF+ TKV
Sbjct:    9 ALVGILALKLAAGKDTKSPNEPIPKPECDESIAVSIRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKV 154          
BLAST of mRNA_E_fasciculatus_S2_contig7929.16088.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 7.910e-61
Identity = 113/162 (69.75%), Postives = 126/162 (77.78%), Query Frame = 0
Query:    1 MEFRRRSATTSLGLAVLGLLAAAAAQDTASPNDPISKPDCD---SDMEVSIRYAGTTQRLYLESAD-GETRGGCVTLGQIWESRAGKGPLFAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDDGGDADELRLLSTSDTYINLRAHGGSLDFVGTKV 158
            ME RR +A     LA++GLLAA +                    SD+ VSIRYAGTT RLYLESAD G TRGGCVTLGQIWESRAGKGPL+AVDPDSG+VS + TGTWLLTEELYVEDGITLKVYG++ GGDADELRLLST++T+INLRAHGGSLDFV TKV
Sbjct:    1 MELRRSAA-----LALVGLLAATSTXXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKV 157          
BLAST of mRNA_E_fasciculatus_S2_contig7929.16088.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 9.470e-59
Identity = 109/162 (67.28%), Postives = 124/162 (76.54%), Query Frame = 0
Query:    1 MEFRRRSATTSLGLAVLGLLAAAAAQDTASPNDPISKPDCDS---DMEVSIRYAGTTQRLYLESAD-GETRGGCVTLGQIWESRAGKGPLFAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDDGGDADELRLLSTSDTYINLRAHGGSLDFVGTKV 158
            ME RR +A     LA++GLLAA +                     D+ VSIRYA +T RLYLESAD G TRGGCVTLGQIWESRAGKGPL+AVDPDSG+VS + TGTWLLTEELYVEDGITL+VYG++ GGDADELRLLST++T+INLRAHGGSLDFV TKV
Sbjct:    1 MELRRSAA-----LALVGLLAATSTXXXXXXXXXXXXXXXXXXXXDIAVSIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKV 157          
BLAST of mRNA_E_fasciculatus_S2_contig7929.16088.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 7.530e-56
Identity = 102/155 (65.81%), Postives = 123/155 (79.35%), Query Frame = 0
Query:    7 SATTSLGLA-VLGLLAA--AAAQDTASPNDPISKPDCDSDMEVSIRYAGTTQRLYLESADGETRGGCVTLGQIWESRAGKGPLFAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDDGGDADELRLLSTSDTYINLRAHGGSLDFVGTKV 158
            +ATT L  A ++ LLAA  A A +T+S N  ISKP C S  +VSIRY+ +++RLYLESADG+TRGGCVTL +IW+   G  PL+AV P SGDVS + TGTWLLTE+LYVEDGITL+V+GT  GG+A+ELRLLSTS  +INLRAHGGSLDFV TKV
Sbjct:    3 TATTMLRTAAIVSLLAARGADAANTSSKNKAISKPSCKSSTKVSIRYSASSKRLYLESADGKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKV 157          
BLAST of mRNA_E_fasciculatus_S2_contig7929.16088.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 186 bits (472), Expect = 8.280e-54
Identity = 100/146 (68.49%), Postives = 112/146 (76.71%), Query Frame = 0
Query:   15 AVLGLLAA--AAAQDTASPNDPISKPDCDSDMEVSIRYAGTTQRLYLESADGETRGGCVTLGQIWESRAGKGPLFAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDDGGDADELRLLSTSDTYINLRAHGGSLDFVGTKV 158
            AV+ LLAA  A A +TAS N  I+KP C S  +VSIRY+ T++RLYLESADG TRGGCVTL  IW    G  PL+AV P SGDVS + TGTWLLTE LYVEDGITL+V+G   GG ADELRLLSTS  +INLRAHGGSLDFV TKV
Sbjct:    9 AVMTLLAARGADAANTASRNKAIAKPSCKSSTKVSIRYSKTSKRLYLESADGNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKV 154          
BLAST of mRNA_E_fasciculatus_S2_contig7929.16088.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 1.050e-52
Identity = 87/122 (71.31%), Postives = 102/122 (83.61%), Query Frame = 0
Query:   37 KPDCDSDMEVSIRYAGTTQRLYLESADGETRGGCVTLGQIWESRAGKGPLFAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDDGGDADELRLLSTSDTYINLRAHGGSLDFVGTKV 158
            KPDCDS + VS+RY   + RLY+ESA+G TRGGCVTL QIWE +    PL+AVDP SGDVS + TGTWLLTEE+YVEDGITL+V+G   GGDADELRLLSTSDT+I+LRA+GGSLDF+ TKV
Sbjct:    7 KPDCDSSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKV 128          
BLAST of mRNA_E_fasciculatus_S2_contig7929.16088.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 1.020e-46
Identity = 91/145 (62.76%), Postives = 103/145 (71.03%), Query Frame = 0
Query:   27 DTASPNDPISKPDCDSDMEVSIRYAGTTQRLYLESADGETRGGCVTLGQIWESRAG------KGPLFAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDDGGDADELRLLST-------SDTYINLRAHGGSLDFVGTKV 158
            DT SPN PI KP+C+S   VSIRY+ TT RLYLE+     RGGCVT+ QIWE+R G      K PL+AVDP SG+ S+  TGTWLL E+LYVEDGITLKV+G   GG ADELRL ST       + TYINLRAHGGSLDF  TKV
Sbjct:  102 DTPSPNTPIPKPECNSTQAVSIRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKV 246          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7929.16088.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D8LHA2_ECTSI4.270e-9689.44Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D7FXE4_ECTSI2.180e-9390.06Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JU98_9PHAE2.480e-8685.09MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
Q7XAJ7_9PHAE1.520e-6270.55Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
D7G339_ECTSI7.910e-6169.75Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D7FXE5_ECTSI9.470e-5967.28Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAK2_9PHAE7.530e-5665.81Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]
A8CEP1_SACJA8.280e-5468.49Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]
Q7XAJ8_9PHAE1.050e-5271.31Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
D8LD45_ECTSI1.020e-4662.76Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 37..158
e-value: 7.9E-12
score: 46.6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..158
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.791

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7929contigE_fasciculatus_S2_contig7929:260..1280 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7929.16088.1mRNA_E_fasciculatus_S2_contig7929.16088.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7929 260..2203 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7929.16088.1 ID=prot_E_fasciculatus_S2_contig7929.16088.1|Name=mRNA_E_fasciculatus_S2_contig7929.16088.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=158bp
MEFRRRSATTSLGLAVLGLLAAAAAQDTASPNDPISKPDCDSDMEVSIRY
AGTTQRLYLESADGETRGGCVTLGQIWESRAGKGPLFAVDPDSGDVSETE
TGTWLLTEELYVEDGITLKVYGTDDGGDADELRLLSTSDTYINLRAHGGS
LDFVGTKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold