prot_E_fasciculatus_S2_contig7910.16076.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7910.16076.1
Unique Nameprot_E_fasciculatus_S2_contig7910.16076.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length123
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7910.16076.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 1.120e-73
Identity = 115/118 (97.46%), Postives = 118/118 (100.00%), Query Frame = 0
Query:    1 MSGKGKGGRGKKITSRSAKAGLQFPVGRIGRFIKQGKYSNRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGDATIASGGVLPNIHAVLLPKK 118
            MSGKGKGGRGKKITSRSAKAGLQFPVGRIGRFIKQGKYS+RVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELN+LLGDATIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRGKKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118          
BLAST of mRNA_E_fasciculatus_S2_contig7910.16076.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 3.400e-71
Identity = 110/122 (90.16%), Postives = 119/122 (97.54%), Query Frame = 0
Query:    1 MSGKGKGGRGKKITSRSAKAGLQFPVGRIGRFIKQGKYSNRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGDATIASGGVLPNIHAVLLPKKTMKK 122
            MSGKGKGGRGKK T+RSAKAGLQFPVGR+GRF+K+GKY++RVG GAPVY+AAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLG+ TIASGGVLPNIHAVLLPKKT+KK
Sbjct:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122          
BLAST of mRNA_E_fasciculatus_S2_contig7910.16076.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 1.160e-69
Identity = 109/121 (90.08%), Postives = 118/121 (97.52%), Query Frame = 0
Query:    1 MSGKGKGGRGKKITSRSAKAGLQFPVGRIGRFIKQGKYSNRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGDATIASGGVLPNIHAVLLPKKTMK 121
            MSGKGKGGRGKK T+RSAKAGLQFPVGR+GRF+K+GKY++RVG GAPVY+AAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLG+ TIASGGVLPNIHAVLLPKKT+K
Sbjct:   46 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166          
BLAST of mRNA_E_fasciculatus_S2_contig7910.16076.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 6.790e-67
Identity = 105/119 (88.24%), Postives = 114/119 (95.80%), Query Frame = 0
Query:    1 MSGKGKGGRGKKITSRSAKAGLQFPVGRIGRFIKQGKYSNRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGDATIASGGVLPNIHAVLLPKKT 119
            MSGKGKGGRGKK TS+S+KAGLQFPV RIGR++K+GKY+ RVG GAPVY+AAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLG+ TIASGGVLPNIHAVLLPKK+
Sbjct:    1 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 119          
BLAST of mRNA_E_fasciculatus_S2_contig7910.16076.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 3.480e-66
Identity = 105/119 (88.24%), Postives = 114/119 (95.80%), Query Frame = 0
Query:    1 MSGKGKGGRGKKITSRSAKAGLQFPVGRIGRFIKQGKYSNRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGDATIASGGVLPNIHAVLLPKKT 119
            MSGKGKGGRGKK TS+S+KAGLQFPV RIGR++K+GKY+ RVG GAPVY+AAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLG+ TIASGGVLPNIHAVLLPKK+
Sbjct:   52 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 170          
BLAST of mRNA_E_fasciculatus_S2_contig7910.16076.1 vs. uniprot
Match: A0A835ZBB6_9STRA (Histone H2A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBB6_9STRA)

HSP 1 Score: 200 bits (508), Expect = 3.410e-64
Identity = 102/125 (81.60%), Postives = 116/125 (92.80%), Query Frame = 0
Query:    1 MSGKGKGGRG---KKITSRSAKAGLQFPVGRIGRFIKQGKYSNRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGDATIASGGVLPNIHAVLLPKKTMKK 122
            M+GKGKGGRG   KKITS+SAKAGLQFPV R+GR++KQG+Y++RVG GAPVY+AAVLEYL AE+LELAGNAARDNKK+RI+PRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKKT  K
Sbjct:    1 MAGKGKGGRGAEGKKITSQSAKAGLQFPVARMGRYLKQGRYADRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNRLLGNVTIASGGVLPNIHAVLLPKKTAAK 125          
BLAST of mRNA_E_fasciculatus_S2_contig7910.16076.1 vs. uniprot
Match: A0A2R5GVM3_9STRA (Histone H2A n=4 Tax=Labyrinthulomycetes TaxID=35131 RepID=A0A2R5GVM3_9STRA)

HSP 1 Score: 198 bits (503), Expect = 1.680e-63
Identity = 103/121 (85.12%), Postives = 111/121 (91.74%), Query Frame = 0
Query:    1 MSGKGKGGRGKK---ITSRSAKAGLQFPVGRIGRFIKQGKYSNRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGDATIASGGVLPNIHAVLLPKK 118
            MSGKGKGGRGKK    T+RSAKAGLQFPVGRI R++K+G Y+ RVGGGAPVYMAAVLEYL AE+LELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLG+ TIASGGVLPNIHAVL+P K
Sbjct:    1 MSGKGKGGRGKKGGKATTRSAKAGLQFPVGRIARYLKKGGYATRVGGGAPVYMAAVLEYLAAEILELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLMPSK 121          
BLAST of mRNA_E_fasciculatus_S2_contig7910.16076.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.800e-63
Identity = 102/121 (84.30%), Postives = 111/121 (91.74%), Query Frame = 0
Query:    3 GKGKGGRG-KKITSRSAKAGLQFPVGRIGRFIKQGKYSNRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGDATIASGGVLPNIHAVLLPKKTMKK 122
            GKGKGGRG KK  S+SAKAGLQFPVGR+GRF+KQG+Y+ RVG GAPVYMAAV+EYL AEVLEL+GNAARDNKK+RIIPRHIQLAVRNDEELNKLLG  TIA+GGVLPNIHAVLLPKKT  K
Sbjct:    5 GKGKGGRGDKKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSK 125          
BLAST of mRNA_E_fasciculatus_S2_contig7910.16076.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 195 bits (496), Expect = 1.670e-62
Identity = 100/122 (81.97%), Postives = 112/122 (91.80%), Query Frame = 0
Query:    1 MSGKGKGGRG-KKITSRSAKAGLQFPVGRIGRFIKQGKYSNRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGDATIASGGVLPNIHAVLLPKKTMK 121
            MSGKGKGGRG KK T+ SAKAGLQFPVGRIGR+++QGKY+ R+G GAPVY+AAVLEYL AE+LELAGNAARDNKK+RI+PRHI LAV+NDEELNKLLG  TIASGGVLPNIHAVLLPKK+ K
Sbjct:    1 MSGKGKGGRGGKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSAK 122          
BLAST of mRNA_E_fasciculatus_S2_contig7910.16076.1 vs. uniprot
Match: A0A061QUG5_9CHLO (Histone H2A n=4 Tax=core chlorophytes TaxID=2692248 RepID=A0A061QUG5_9CHLO)

HSP 1 Score: 196 bits (497), Expect = 1.730e-62
Identity = 98/120 (81.67%), Postives = 109/120 (90.83%), Query Frame = 0
Query:    3 GKGKGGRGKKITSRSAKAGLQFPVGRIGRFIKQGKYSNRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGDATIASGGVLPNIHAVLLPKKTMKK 122
            GKGK   GKK  SRSAKAGLQFPVGR+ R++K+GKY+ R+G GAPVY+AAVLEYLTAEVLELAGNAARDNKK RI+PRHIQLAVRNDEEL+KLLGD TIASGGVLPNIH+VLLPKK+ KK
Sbjct:    5 GKGKSAAGKKAVSRSAKAGLQFPVGRVARYLKKGKYATRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIASGGVLPNIHSVLLPKKSDKK 124          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7910.16076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLP0_ECTSI1.120e-7397.46Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
D7FWI9_ECTSI3.400e-7190.16Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI1.160e-6990.08Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE6.790e-6788.24Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FVQ5_ECTSI3.480e-6688.24Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A835ZBB6_9STRA3.410e-6481.60Histone H2A n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A2R5GVM3_9STRA1.680e-6385.12Histone H2A n=4 Tax=Labyrinthulomycetes TaxID=3513... [more]
A0A835ZLE9_9STRA1.800e-6384.30Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A6U2JFS4_9STRA1.670e-6281.97Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep... [more]
A0A061QUG5_9CHLO1.730e-6281.67Histone H2A n=4 Tax=core chlorophytes TaxID=269224... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 56..69
score: 90.54
coord: 41..56
score: 82.68
coord: 98..116
score: 72.18
coord: 70..84
score: 77.52
coord: 12..34
score: 65.8
IPR002119Histone H2ASMARTSM00414h2a4coord: 3..121
e-value: 4.3E-77
score: 272.1
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..122
e-value: 2.3E-60
score: 204.0
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..121
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 11..87
e-value: 1.4E-15
score: 57.8
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 90..122
e-value: 3.6E-20
score: 71.4
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 6..120
NoneNo IPR availablePANTHERPTHR23430:SF238coord: 6..120
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 20..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7910contigE_fasciculatus_S2_contig7910:914..1282 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7910.16076.1mRNA_E_fasciculatus_S2_contig7910.16076.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7910 914..1282 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7910.16076.1 ID=prot_E_fasciculatus_S2_contig7910.16076.1|Name=mRNA_E_fasciculatus_S2_contig7910.16076.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=123bp
MSGKGKGGRGKKITSRSAKAGLQFPVGRIGRFIKQGKYSNRVGGGAPVYM
AAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGDAT
IASGGVLPNIHAVLLPKKTMKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032458Histone_H2A_CS
IPR032454Histone_H2A_C
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold
IPR002119Histone_H2A