prot_E_fasciculatus_S2_contig7893.16053.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7893.16053.1
Unique Nameprot_E_fasciculatus_S2_contig7893.16053.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length703
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7893.16053.1 vs. uniprot
Match: A0A6H5K762_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K762_9PHAE)

HSP 1 Score: 265 bits (678), Expect = 8.480e-75
Identity = 135/165 (81.82%), Postives = 141/165 (85.45%), Query Frame = 0
Query:    1 MPPRETCGTPRGTYRASRIYRRTRTNERAARRWRKIGMPFELRALPRGSDAANNITRVEGGASKRSYLPNSRSGPRRPSRKRQGVVEERTKPLTEMKKMLYDSRSGDWRKALSALDEMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAPPDLSA 165
            MPPR+TC T R  +RASR+YRRTR N RA RRW K GMPFELRALP GSDAANNI R +GG SKR  L NSRSGP RPSR+RQG VE  TK LTEMKKMLYDSRSGDWRKAL A+D MKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGA PDLSA
Sbjct:   42 MPPRDTCVTSRRAHRASRVYRRTRANGRAVRRWLKTGMPFELRALPPGSDAANNIARADGGNSKRPPLSNSRSGPSRPSRRRQGAVEAGTKSLTEMKKMLYDSRSGDWRKALRAVDGMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSA 206          
BLAST of mRNA_E_fasciculatus_S2_contig7893.16053.1 vs. uniprot
Match: A0A6H5KWX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWX4_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 2.610e-59
Identity = 121/164 (73.78%), Postives = 133/164 (81.10%), Query Frame = 0
Query:    1 MPPRETCGTPRGTYRASRIYRRTRTNERAARRWRKIGMPFELRALPRGSDAANNIT-RVEGGASKRSYLPNSRSGPRRPSRKRQGVVEERTKPLTEMKKMLYDSRSGDWRKALSALDEMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAPPDL 163
            +P RE CGTPRGT RASR+YRRTRTNE AARRWR+ G  FELRALPRGSDAANNIT RVEGGA    YLP+SR  P RP  KRQGVVE RTK  T++  ML DS SGDWRKAL ALD M++LPG L+DQ+S+CMAITACGRG QWEQAVRLLREMPT G  P+L
Sbjct:    4 LPLREACGTPRGTSRASRLYRRTRTNECAARRWREAGTLFELRALPRGSDAANNITSRVEGGARNGLYLPDSRPRPSRPVGKRQGVVEGRTKSRTKLTTMLRDSGSGDWRKALRALDGMRQLPGGLLDQESFCMAITACGRGKQWEQAVRLLREMPTAGLTPNL 167          
BLAST of mRNA_E_fasciculatus_S2_contig7893.16053.1 vs. uniprot
Match: D8LIJ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIJ9_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 7.510e-17
Identity = 46/65 (70.77%), Postives = 52/65 (80.00%), Query Frame = 0
Query:   99 MLYDSRSGDWRKALSALDEMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAPPDL 163
            M  DSR GD RKAL ALD MK+LP  L+ QKS+CM ITACGRGGQWEQAV+LLREMPT G  P++
Sbjct:    1 MPRDSRGGDRRKALRALDGMKRLPRELLHQKSHCMVITACGRGGQWEQAVKLLREMPTAGLSPNV 65          
BLAST of mRNA_E_fasciculatus_S2_contig7893.16053.1 vs. uniprot
Match: A0A6H5JAI1_9PHAE (PPR_long domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAI1_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 2.820e-7
Identity = 49/145 (33.79%), Postives = 67/145 (46.21%), Query Frame = 0
Query:    1 MPPRETCGTPRGTYRASRIYRRTRTNERAARRWRKIGMPFELRALPRGSDAANNITRVEGGASKRSYLPNSRSGPRRPSRKRQGVVEE--RTKPLTEMKKMLYDSRSGDWRKALSALDEMKKLPGWLIDQKSYCMAITACGRGGQ 143
            MP   TC       + SR YR +R    + R      MP EL       DA      V G A++   L     GP   S + +G      ++K L ++K  L +++ GDWR AL+ALDE K + G  +D  SY +AI AC  G Q
Sbjct:   52 MPTHSTCSDSELMAKNSRTYRHSRRERGSTRHLSGTRMPCEL-------DAGAVDAGVSGEATRLGVLSRKGEGPLESSTRSRGAARRGGKSKSLVKLKSTLLEAKDGDWRTALAALDEFK-ISGGNLDTTSYNIAIAACSNGKQ 188          
BLAST of mRNA_E_fasciculatus_S2_contig7893.16053.1 vs. uniprot
Match: D8LG06_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG06_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 1.940e-6
Identity = 35/83 (42.17%), Postives = 52/83 (62.65%), Query Frame = 0
Query:   83 QGVVEERTKPLTEMKKMLYDSRS-GDWRKALSALDEMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPT-EGAPPDL 163
            QG     ++   +++  L ++ + G WR+AL  LDEMK+  G ++   SY  AIT CGR GQWE+A+ LLRE+P  EG  P++
Sbjct:  100 QGAARANSRAARKLQAALREAATTGKWREALGILDEMKE--GGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNV 180          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7893.16053.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5K762_9PHAE8.480e-7581.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KWX4_9PHAE2.610e-5973.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIJ9_ECTSI7.510e-1770.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JAI1_9PHAE2.820e-733.79PPR_long domain-containing protein n=2 Tax=Ectocar... [more]
D8LG06_ECTSI1.940e-642.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 481..505
e-value: 0.026
score: 14.8
coord: 103..120
e-value: 0.83
score: 10.0
coord: 514..541
e-value: 0.0024
score: 18.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 549..583
e-value: 3.2E-7
score: 28.1
coord: 654..688
e-value: 2.3E-8
score: 31.7
coord: 619..653
e-value: 2.3E-7
score: 28.6
coord: 200..233
e-value: 2.6E-6
score: 25.3
coord: 304..338
e-value: 1.1E-4
score: 20.2
coord: 444..470
e-value: 1.4E-5
score: 23.0
coord: 130..162
e-value: 9.9E-6
score: 23.4
coord: 269..303
e-value: 1.5E-9
score: 35.4
coord: 339..373
e-value: 1.9E-7
score: 28.8
coord: 374..408
e-value: 9.0E-9
score: 33.0
coord: 165..198
e-value: 2.9E-5
score: 22.0
coord: 514..548
e-value: 1.9E-4
score: 19.4
coord: 409..443
e-value: 4.7E-7
score: 27.6
coord: 584..617
e-value: 6.8E-6
score: 23.9
coord: 235..268
e-value: 2.5E-6
score: 25.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 336..385
e-value: 9.5E-14
score: 51.3
coord: 616..664
e-value: 2.0E-10
score: 40.7
coord: 130..175
e-value: 2.1E-7
score: 31.0
coord: 546..595
e-value: 2.8E-10
score: 40.2
coord: 406..455
e-value: 4.0E-11
score: 42.9
coord: 266..314
e-value: 1.0E-10
score: 41.6
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 228..259
e-value: 1.8E-5
score: 24.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 337..371
score: 12.617
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 687..702
score: 5.064
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 407..441
score: 12.31
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 442..476
score: 10.348
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 547..581
score: 11.553
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 652..686
score: 12.353
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 582..616
score: 11.531
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 372..406
score: 13.252
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 197..231
score: 11.488
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 127..161
score: 11.235
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 617..651
score: 12.09
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 162..196
score: 11.213
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 267..301
score: 13.603
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 512..546
score: 9.569
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 302..336
score: 11.246
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 477..511
score: 8.32
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 232..266
score: 11.553
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 598..702
e-value: 1.6E-33
score: 118.6
coord: 215..329
e-value: 1.7E-38
score: 134.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 330..400
e-value: 8.0E-21
score: 76.4
coord: 401..473
e-value: 1.9E-18
score: 68.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 477..597
e-value: 1.3E-30
score: 108.0
coord: 90..210
e-value: 3.9E-29
score: 103.3
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 533..698
coord: 99..295
coord: 391..574
coord: 264..400

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7893contigE_fasciculatus_S2_contig7893:1345..3453 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7893.16053.1mRNA_E_fasciculatus_S2_contig7893.16053.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7893 1305..3973 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7893.16053.1 ID=prot_E_fasciculatus_S2_contig7893.16053.1|Name=mRNA_E_fasciculatus_S2_contig7893.16053.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=703bp
MPPRETCGTPRGTYRASRIYRRTRTNERAARRWRKIGMPFELRALPRGSD
AANNITRVEGGASKRSYLPNSRSGPRRPSRKRQGVVEERTKPLTEMKKML
YDSRSGDWRKALSALDEMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRL
LREMPTEGAPPDLSAYSAVIDACAKGGQWKMAVFFLMEMPTKGIAPDARS
YGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINSCAKAGQWE
IAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELLEDMRTSGIA
PDVITYGSAIAACANEGRWKEAVSLLRKIPTAGLTPNVISYSSVITACAK
EGQWKIALDLLREMKTMGLTPNIITYNAAIDACAKGGRWKEAMDLLREMP
TVGLRPDVVSYSSVIDACSKGDRWKEAVDILREMPTVGLPPNAISYNSAI
DACAKGGQWKEAKCLLREMPTASLTQRVIGYNSAIAACAKGEQWKEALAL
LREIPTVGLTTTEFSYSSAIDACGKGNLWIKAKGLLREMATVGLVPNEVC
YNSAIDACGRGDQWQEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWK
EALALLKEMSTTGLAPDLICYNSAIDACSKGGRWKMAVALLSEMPEAGLT
PNIISYSSAIDACVRGGRWKEGIDLLEEMRALGVVPDVITYHALIATCAK
YD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat