prot_E_fasciculatus_S2_contig782.15988.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig782.15988.1
Unique Nameprot_E_fasciculatus_S2_contig782.15988.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length167
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig782.15988.1 vs. uniprot
Match: A0A5B8MZ58_9CHLO (ARM repeat domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MZ58_9CHLO)

HSP 1 Score: 53.9 bits (128), Expect = 1.990e-5
Identity = 30/62 (48.39%), Postives = 40/62 (64.52%), Query Frame = 0 
Query:    1 QASGLGALQSVCFDKPGRDATRGS-GLIGAVVRLLEDDSPKVRARALGTVHNLSTDARSIGI 61
            QA+  GALQSV + + GR     S GL+  +V LL    PKVRARA+G +HNLS++  +I I
Sbjct:  182 QANAAGALQSVSYHEEGRKELLASEGLLPRIVNLLASQEPKVRARAVGALHNLSSEPGTIRI 243
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BLAST of mRNA_E_fasciculatus_S2_contig782.15988.1 vs. uniprot
Match: A0A7S0SGK9_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SGK9_9CHLO)

HSP 1 Score: 52.4 bits (124), Expect = 6.290e-5
Identity = 27/61 (44.26%), Postives = 41/61 (67.21%), Query Frame = 0 
Query:    1 QASGLGALQSVCFDKPGRDATRGSGLIGAVVRLLED--DSPKVRARALGTVHNLSTDARSI 59
            QA+  GA+QS+CF + GR   R    + A++RLL +   + KV+ RA+G +HN+S+DA SI
Sbjct:  173 QANAAGAIQSICFQEKGRARVRDLDGVPAMLRLLGECRGNVKVQTRAIGAIHNMSSDADSI 233
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig782.15988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A5B8MZ58_9CHLO1.990e-548.39ARM repeat domain-containing protein n=1 Tax=Chlor... [more]
A0A7S0SGK9_9CHLO6.290e-544.26Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 14..54
e-value: 0.26
score: 20.3
coord: 97..137
e-value: 5.7
score: 15.1
coord: 55..95
e-value: 7.1E-4
score: 28.9
IPR000225ArmadilloPFAMPF00514Armcoord: 61..95
e-value: 3.7E-7
score: 30.0
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 25..67
score: 11.322
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 66..108
score: 13.597
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..162
e-value: 6.1E-25
score: 89.9
NoneNo IPR availablePANTHERPTHR15599RTDR1coord: 25..146
NoneNo IPR availablePANTHERPTHR15599:SF1RADIAL SPOKE HEAD 14 HOMOLOGcoord: 25..146
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 3..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig782contigE_fasciculatus_S2_contig782:61..2401 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig782.15988.1mRNA_E_fasciculatus_S2_contig782.15988.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig782 61..2401 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig782.15988.1 ID=prot_E_fasciculatus_S2_contig782.15988.1|Name=mRNA_E_fasciculatus_S2_contig782.15988.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=167bp
QASGLGALQSVCFDKPGRDATRGSGLIGAVVRLLEDDSPKVRARALGTVH
NLSTDARSIGIIREEGGLPRLVRLLRSHEAHVCGGAAGTIQNLSREEKSR
ALLLESFGAVEPLADLLVGRHVKSQISAAGALVNIVGPDARGSKRQLLHD
VVTDGIVLGVIESCMV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR011989ARM-like
IPR000225Armadillo