prot_E_fasciculatus_S2_contig7811.15980.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7811.15980.1
Unique Nameprot_E_fasciculatus_S2_contig7811.15980.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length70
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7811.15980.1 vs. uniprot
Match: A0A552LH38_9CHRO (Group II intron reverse transcriptase/maturase (Fragment) n=2 Tax=Microcystis TaxID=1125 RepID=A0A552LH38_9CHRO)

HSP 1 Score: 53.5 bits (127), Expect = 1.400e-6
Identity = 29/68 (42.65%), Postives = 41/68 (60.29%), Query Frame = 0
Query:    4 VASPTRQL-LYDEQRGKCTYCDKEITPNPEDFDVDHIIPVSLGGPTCLSNLHLLSMTCHKAKSGRERS 70
            + +PTR   L  +Q+GKC+ C +  TP+ +  +VDHI+P+SLGG     NL LL   CH  KS  + S
Sbjct:  359 IDTPTRVAKLLKKQQGKCSRCGQYFTPS-DLIEVDHILPLSLGGKDEYKNLQLLHRHCHDDKSASDGS 425          
BLAST of mRNA_E_fasciculatus_S2_contig7811.15980.1 vs. uniprot
Match: A0A415G505_9FIRM (HNH endonuclease n=1 Tax=Anaerobutyricum hallii TaxID=39488 RepID=A0A415G505_9FIRM)

HSP 1 Score: 52.4 bits (124), Expect = 1.460e-6
Identity = 25/65 (38.46%), Postives = 40/65 (61.54%), Query Frame = 0
Query:    1 RKQVASPTRQLLYDEQRGKCTYCDKEITPNPEDFDVDHIIPVSLGGPTCLSNLHLLSMTCHKAKS 65
            RK  +   R+LLY +  GKC  C K+IT   ++ ++DHIIP+S+GG   + NL +  M  ++ K+
Sbjct:   71 RKHFSQEVRKLLYQQAEGKCALCGKKITF--DEMELDHIIPISMGGADEVENLQVCCMPDNRYKA 133          
BLAST of mRNA_E_fasciculatus_S2_contig7811.15980.1 vs. uniprot
Match: A0A7Y5MFJ4_9CYAN (HNH endonuclease n=1 Tax=Pseudanabaena biceps TaxID=927669 RepID=A0A7Y5MFJ4_9CYAN)

HSP 1 Score: 50.4 bits (119), Expect = 3.680e-6
Identity = 24/59 (40.68%), Postives = 33/59 (55.93%), Query Frame = 0
Query:   12 LYDEQRGKCTYCDKEITPNPEDFDVDHIIPVSLGGPTCLSNLHLLSMTCHKAKSGRERS 70
            L+  Q GKC +C        + +++DHIIP SLGG    +NLHLL   CH  K+  + S
Sbjct:   33 LFKSQNGKCNHCGLTFRDG-DVWEIDHIIPRSLGGGNGYANLHLLHRHCHDTKTASDGS 90          
BLAST of mRNA_E_fasciculatus_S2_contig7811.15980.1 vs. uniprot
Match: UPI0019BE3993 (HNH endonuclease n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI0019BE3993)

HSP 1 Score: 50.8 bits (120), Expect = 4.130e-6
Identity = 24/67 (35.82%), Postives = 36/67 (53.73%), Query Frame = 0
Query:    1 RKQVASPTRQLLYDEQRGKCTYCDKEITPNPEDFDVDHIIPVSLGGPTCLSNLHLLSMTCHKAKSGR 67
            R  +    R L+ ++ R +C YC   +T     F++DH+IP SLGG T   NL L    C++ K+ R
Sbjct:    3 RTHIPQSLRALVAEDARHRCAYCQSAVTIVGMPFEIDHVIPESLGGLTVRENLCLCCSPCNERKACR 69          
BLAST of mRNA_E_fasciculatus_S2_contig7811.15980.1 vs. uniprot
Match: A0A1U7I6H6_9NOSO (Group II intron reverse transcriptase/maturase n=2 Tax=Nostoc TaxID=1177 RepID=A0A1U7I6H6_9NOSO)

HSP 1 Score: 51.2 bits (121), Expect = 9.280e-6
Identity = 25/69 (36.23%), Postives = 40/69 (57.97%), Query Frame = 0
Query:    2 KQVASPTRQLLYDEQRGKCTYCDKEITPNPEDFDVDHIIPVSLGGPTCLSNLHLLSMTCHKAKSGRERS 70
            K++ S   ++L+ +Q+GKC YC    T   +  ++DHIIP+SLGG     N+  L   CH  K+ ++ S
Sbjct:  509 KEIPSLLAKILH-KQKGKCAYCGLTFTLEDQ-IELDHIIPISLGGKRKFDNIQALHRHCHDQKTAKDGS 575          
BLAST of mRNA_E_fasciculatus_S2_contig7811.15980.1 vs. uniprot
Match: UPI001BA70A3C (HNH endonuclease n=1 Tax=Bacillus cereus TaxID=1396 RepID=UPI001BA70A3C)

HSP 1 Score: 50.8 bits (120), Expect = 1.150e-5
Identity = 24/75 (32.00%), Postives = 47/75 (62.67%), Query Frame = 0
Query:    1 RKQVASPTRQLLYDEQRGKCTYCDKEITP-----NPEDFDVDHIIPVSLGGPTCLSNLHLLSMTCHKAKSGRERS 70
            RK + +  ++ +Y   RG+C YC+K++T      N E++D  HI+P++  G   ++N+ LL   C++ KSG++++
Sbjct:  204 RKNIPNWVKKAVYYRDRGRCVYCNKDLTGLVSIFNKENYD--HIVPLNEYGFNDVTNIQLLCRKCNEDKSGKQKN 276          
BLAST of mRNA_E_fasciculatus_S2_contig7811.15980.1 vs. uniprot
Match: K9VG06_9CYAN (RNA-directed DNA polymerase n=1 Tax=Oscillatoria nigro-viridis PCC 7112 TaxID=179408 RepID=K9VG06_9CYAN)

HSP 1 Score: 50.8 bits (120), Expect = 1.270e-5
Identity = 25/69 (36.23%), Postives = 39/69 (56.52%), Query Frame = 0
Query:    2 KQVASPTRQLLYDEQRGKCTYCDKEITPNPEDFDVDHIIPVSLGGPTCLSNLHLLSMTCHKAKSGRERS 70
            K++ S   + L+ +Q+GKC  CD   T   +  ++DHI+P+SLGG     N+  L   CH  K+ R+ S
Sbjct:  509 KEIPSLLAKTLH-KQKGKCAQCDLTFTTEDQ-IELDHILPISLGGKKKFENIQALHRHCHDQKTARDGS 575          
BLAST of mRNA_E_fasciculatus_S2_contig7811.15980.1 vs. uniprot
Match: A0A0F9SV00_9ZZZZ (HNHc domain-containing protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9SV00_9ZZZZ)

HSP 1 Score: 50.1 bits (118), Expect = 1.340e-5
Identity = 22/63 (34.92%), Postives = 36/63 (57.14%), Query Frame = 0
Query:    2 KQVASPTRQLLYDEQRGKCTYCDKEITPNPEDFDVDHIIPVSLGGPTCLSNLHLLSMTCHKAK 64
            K+ A    Q+L+ EQ+G C +C K +     DF +DH +P+  GG  C++N+ L    C+ +K
Sbjct:  117 KKTALEIEQMLWQEQKGLCVFCKKNM--ERRDFHMDHYVPLIRGGKHCITNVVLTCSACNLSK 177          
BLAST of mRNA_E_fasciculatus_S2_contig7811.15980.1 vs. uniprot
Match: A0A7Y5I9U9_9CYAN (Group II intron reverse transcriptase/maturase n=2 Tax=Pseudanabaena biceps TaxID=927669 RepID=A0A7Y5I9U9_9CYAN)

HSP 1 Score: 50.4 bits (119), Expect = 1.720e-5
Identity = 24/59 (40.68%), Postives = 33/59 (55.93%), Query Frame = 0
Query:   12 LYDEQRGKCTYCDKEITPNPEDFDVDHIIPVSLGGPTCLSNLHLLSMTCHKAKSGRERS 70
            L+  Q GKC +C        + +++DHIIP SLGG    +NLHLL   CH  K+  + S
Sbjct:  391 LFKSQNGKCNHCGLTFRDG-DVWEIDHIIPRSLGGGNGYANLHLLHRHCHDTKTASDGS 448          
BLAST of mRNA_E_fasciculatus_S2_contig7811.15980.1 vs. uniprot
Match: A0A1D2P5R1_9CYAN (Group II intron reverse transcriptase/maturase n=1 Tax=Scytonema millei VB511283 TaxID=1245923 RepID=A0A1D2P5R1_9CYAN)

HSP 1 Score: 50.4 bits (119), Expect = 1.740e-5
Identity = 25/69 (36.23%), Postives = 40/69 (57.97%), Query Frame = 0
Query:    2 KQVASPTRQLLYDEQRGKCTYCDKEITPNPEDFDVDHIIPVSLGGPTCLSNLHLLSMTCHKAKSGRERS 70
            K++ S   ++L+ +Q+GKC +C    T   +  ++DHIIP+SLGG     N+  L   CH  K+ R+ S
Sbjct:  509 KEIPSLLAKILH-KQKGKCGHCGLTFTTEDQ-IELDHIIPISLGGKRKFDNIQALHRHCHDQKTARDGS 575          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7811.15980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A552LH38_9CHRO1.400e-642.65Group II intron reverse transcriptase/maturase (Fr... [more]
A0A415G505_9FIRM1.460e-638.46HNH endonuclease n=1 Tax=Anaerobutyricum hallii Ta... [more]
A0A7Y5MFJ4_9CYAN3.680e-640.68HNH endonuclease n=1 Tax=Pseudanabaena biceps TaxI... [more]
UPI0019BE39934.130e-635.82HNH endonuclease n=1 Tax=Planctomycetaceae bacteri... [more]
A0A1U7I6H6_9NOSO9.280e-636.23Group II intron reverse transcriptase/maturase n=2... [more]
UPI001BA70A3C1.150e-532.00HNH endonuclease n=1 Tax=Bacillus cereus TaxID=139... [more]
K9VG06_9CYAN1.270e-536.23RNA-directed DNA polymerase n=1 Tax=Oscillatoria n... [more]
A0A0F9SV00_9ZZZZ1.340e-534.92HNHc domain-containing protein n=1 Tax=marine sedi... [more]
A0A7Y5I9U9_9CYAN1.720e-540.68Group II intron reverse transcriptase/maturase n=2... [more]
A0A1D2P5R1_9CYAN1.740e-536.23Group II intron reverse transcriptase/maturase n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003615HNH nucleaseSMARTSM00507HNH_5coord: 7..62
e-value: 2.6E-9
score: 47.0
IPR002711HNH endonucleasePFAMPF01844HNHcoord: 20..65
e-value: 5.8E-12
score: 45.6
NoneNo IPR availableGENE3D3.30.40.60coord: 1..70
e-value: 1.7E-12
score: 48.9
NoneNo IPR availablePANTHERPTHR33877FAMILY NOT NAMEDcoord: 7..65
NoneNo IPR availablePANTHERPTHR33877:SF15-METHYLCYTOSINE-SPECIFIC RESTRICTION ENZYME Acoord: 7..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7811contigE_fasciculatus_S2_contig7811:1295..1504 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7811.15980.1mRNA_E_fasciculatus_S2_contig7811.15980.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7811 1295..1504 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7811.15980.1 ID=prot_E_fasciculatus_S2_contig7811.15980.1|Name=mRNA_E_fasciculatus_S2_contig7811.15980.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=70bp
RKQVASPTRQLLYDEQRGKCTYCDKEITPNPEDFDVDHIIPVSLGGPTCL
SNLHLLSMTCHKAKSGRERS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002711HNH
IPR003615HNH_nuc