prot_E_fasciculatus_S2_contig779.15957.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig779.15957.1
Unique Name	prot_E_fasciculatus_S2_contig779.15957.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	598

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig779.15957.1 vs. uniprot
Match: D7G1J1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J1_ECTSI)

HSP 1 Score: 778 bits (2008), Expect = 9.580e-279
Identity = 444/594 (74.75%), Postives = 457/594 (76.94%), Query Frame = 0

Query:    9 APPKLKLRNNAVQAVGETYFQVALMGLATAGVLAIVAVSIGSTRGMFEFTVDRCDCLLTSEVEDAVAQGAECVFGQDYMGVDIGWKSFVVDKAYSTEGCLDGWEGTTDIGSPFGDGIYRKKSETYGNGATGAADASVGLFVVSAFIAIVMFKTVQMSYTGPGSIYSIGLHNIAVMCLLLSVASGISIAAFWGRIQGKIGSMGNSLAATLFKATLDVCEDDWDTVGFPVGE----EIFCQAAPWNFEVPLYAGWIAIAHVAVMFLTSVWILSRSGLVEGILDGSKLVGGKVVTPRVVEYEQAVGRALATTEDPDYDVSDNKLYTGEQNIMIRPYPLPGSVKKVAKAAEALVSPLRKM-GGSPKHTRNNTLRTGESAGASPKISLGGDIEGGHAPGGHNLPSPGPVQSIPSAAAAPASKAXXXXXXXXXXXXXXXXXLPGRVGGGGGRSASASEEEVSPATRSSATGGSSWGRDGEGSGSSGDAETDSSLGSLAQSPTSVVSGVSHDKTRSEIDWGRIMDAGDNDGTAKPYDEGDEDDDSPHLSSGMLGDLDMMFHGPSVKDGLTLGAITEDPREDMVSEFTMTPKKRESATHFEV 597
            APPKL +RN AVQAVGE YFQVAL                                                        VDIGWKSFV+DKAYSTEGCLDGWEGT DIGSPFGDGIYRKKS  YGNGATGAADASVGLFVVSAFIAI+MFKTV+MSYTGPGSIYSIGLHNIAVMCLLLSVASGISIAAFWGRIQGK+G M +SLAATLF ATLDVCEDDWDTVGFPVGE    EIFCQA PWNFEVPLYAGW AIAHVAVMFLTSVWIL++SGLVEGILDGSKLVGGK VTPRVVEYEQAVGRALATTEDPDYDVSDNKLYTGE NIMIRPYPLPGSVKKVAKAAEALVSPLRKM GGSPKHT++NTLRTGE AG  PKI+LGGDIEG  A GGHNL SPGPVQSIP A  AP SKA  XXXXXXXXXXXXXXXLPG+ GG   RSASASEEEVSPA RSS                                      G  H KTRSEIDWGRIMDAGDNDGTAK YD+GDEDDDSPHLSS MLGDLDMMFHGPSVKDGLTLGAITEDPREDMVSEFTMTPK R SATHFEV
Sbjct:    2 APPKLAMRNQAVQAVGEKYFQVAL--------------------------------------------------------VDIGWKSFVIDKAYSTEGCLDGWEGTKDIGSPFGDGIYRKKSAVYGNGATGAADASVGLFVVSAFIAIIMFKTVKMSYTGPGSIYSIGLHNIAVMCLLLSVASGISIAAFWGRIQGKLGDMESSLAATLFMATLDVCEDDWDTVGFPVGEGESEEIFCQAKPWNFEVPLYAGWTAIAHVAVMFLTSVWILTKSGLVEGILDGSKLVGGKAVTPRVVEYEQAVGRALATTEDPDYDVSDNKLYTGEANIMIRPYPLPGSVKKVAKAAEALVSPLRKMQGGSPKHTKDNTLRTGERAGVRPKIALGGDIEG-QATGGHNLSSPGPVQSIPRATGAPGSKAATXXXXXXXXXXXXXXXLPGKPGGXXXRSASASEEEVSPAIRSSI-------------------------------------GKGHGKTRSEIDWGRIMDAGDNDGTAKQYDDGDEDDDSPHLSSVMLGDLDMMFHGPSVKDGLTLGAITEDPREDMVSEFTMTPKTRGSATHFEV 501

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BLAST of mRNA_E_fasciculatus_S2_contig779.15957.1 vs. uniprot
Match: A0A6H5L9G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9G0_9PHAE)

HSP 1 Score: 436 bits (1120), Expect = 4.050e-146
Identity = 272/384 (70.83%), Postives = 284/384 (73.96%), Query Frame = 0

Query:  266 MFLTSVWILSRSGLVEGILDGSKLVGGKVVTPRVVEYEQAVGRALATTEDPDYDVSDNKLYTGEQNIMIRPYPLPGSVKKVAKAAEALVSPLRKMGGSPKHTRNNTLRTGESAGASPKISLGGDIEGGHAPGGHNLPSPGPVQSIPSAAAAPASKAXXXXXXXXXXXXXXXXXLPGRV-------GGGGGRSASASEEEVSPATRSSATGGSS---------------------------------------------WGRDGEGSGSSGDAETDSSLGSLAQSPTSVVSGVSHDKTRSEIDWGRIMDAGDNDGTAKPYDEGDEDDDSPHLSSGMLGDLDMMFHGPSVKDGLTLGAITEDPREDMVSEFTMTPKKRESATHFEV 597
            MFLTSVWILS+SGLVEGILDGSKLV GK VT        AVGRALATTEDPDYDVSDNKLYTGE NIMIRPYPLPGSVKKVAKAAE LVSPLRKMGGSPKHT+NNTLRTGESAG  P I+LG DIEG  APGGHNL SPGPV+SIP AA APASKA  XXXXXXXXXXXXXXX            GG GGRSASASEEEVSPA RSS + G +                                             W RD      +GD ETDSSLG++A+SP SVVSG  H+KTRSEIDWGRIMDAG NDGTAK YD+GDEDDDSPHLSSGMLGDLDMMFHGPSVKDGLTLGAITEDPREDMVSEFTMTPK R SATHFEV
Sbjct:    1 MFLTSVWILSKSGLVEGILDGSKLVDGKAVT--------AVGRALATTEDPDYDVSDNKLYTGEANIMIRPYPLPGSVKKVAKAAEVLVSPLRKMGGSPKHTKNNTLRTGESAGVRPNIALGADIEG-QAPGGHNLSSPGPVESIPRAAVAPASKAATXXXXXXXXXXXXXXXXXXXXXXXXXXPGGEGGRSASASEEEVSPAIRSSGSSGRTLNRRAHAMGIKPQSSMTSHHIIRRRQITMVNRDHVSTSKYHNKGPWDRD------AGDVETDSSLGNVARSPASVVSGKGHEKTRSEIDWGRIMDAGHNDGTAKSYDDGDEDDDSPHLSSGMLGDLDMMFHGPSVKDGLTLGAITEDPREDMVSEFTMTPKARGSATHFEV 369

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig779.15957.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig779.15957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G1J1_ECTSI	9.580e-279	74.75	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L9G0_9PHAE	4.050e-146	70.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 49..136
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..26
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 275..597
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 137..159
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 27..48
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 160..178
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 179..199
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 253..274
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 200..252
None	No IPR available	TMHMM	TMhelix		coord: 253..275
None	No IPR available	TMHMM	TMhelix		coord: 178..200
None	No IPR available	TMHMM	TMhelix		coord: 27..49
None	No IPR available	TMHMM	TMhelix		coord: 136..158

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig779	contig	E_fasciculatus_S2_contig779:9111..20315 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig779.15957.1	mRNA_E_fasciculatus_S2_contig779.15957.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig779 9111..20315 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig779.15957.1 ID=prot_E_fasciculatus_S2_contig779.15957.1|Name=mRNA_E_fasciculatus_S2_contig779.15957.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=598bp
MKKKNTEKAPPKLKLRNNAVQAVGETYFQVALMGLATAGVLAIVAVSIGS
TRGMFEFTVDRCDCLLTSEVEDAVAQGAECVFGQDYMGVDIGWKSFVVDK
AYSTEGCLDGWEGTTDIGSPFGDGIYRKKSETYGNGATGAADASVGLFVV
SAFIAIVMFKTVQMSYTGPGSIYSIGLHNIAVMCLLLSVASGISIAAFWG
RIQGKIGSMGNSLAATLFKATLDVCEDDWDTVGFPVGEEIFCQAAPWNFE
VPLYAGWIAIAHVAVMFLTSVWILSRSGLVEGILDGSKLVGGKVVTPRVV
EYEQAVGRALATTEDPDYDVSDNKLYTGEQNIMIRPYPLPGSVKKVAKAA
EALVSPLRKMGGSPKHTRNNTLRTGESAGASPKISLGGDIEGGHAPGGHN
LPSPGPVQSIPSAAAAPASKAATKAAKKAAKKAAKKGALPGRVGGGGGRS
ASASEEEVSPATRSSATGGSSWGRDGEGSGSSGDAETDSSLGSLAQSPTS
VVSGVSHDKTRSEIDWGRIMDAGDNDGTAKPYDEGDEDDDSPHLSSGMLG
DLDMMFHGPSVKDGLTLGAITEDPREDMVSEFTMTPKKRESATHFEV*