prot_E_fasciculatus_S2_contig7708.15882.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig7708.15882.1
Unique Name	prot_E_fasciculatus_S2_contig7708.15882.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	92

Homology

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig7708.15882.1 vs. uniprot
Match: D8LSG7_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSG7_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 2.710e-44
Identity = 77/81 (95.06%), Postives = 80/81 (98.77%), Query Frame = 0

Query:   12 MAGFLVVMLINVLLLVLAVFLMFFADPDSHGYGGQLYRLVCEGGPRMLSAGMRLVFGEACAGRVSECGNWVMNKPNRLMQG 92
            MAGFLVVM INVLLLVLA+FLMFFADP+SHGYGGQLYRLVCEGGPRMLSAGMRLVFGEACAG+VSECGNWVMNKPNRLMQG
Sbjct:    1 MAGFLVVMSINVLLLVLAIFLMFFADPESHGYGGQLYRLVCEGGPRMLSAGMRLVFGEACAGKVSECGNWVMNKPNRLMQG 81

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig7708.15882.1 vs. uniprot
Match: A0A6H5L085_9PHAE (Palmitoyltransferase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L085_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 3.720e-41
Identity = 74/81 (91.36%), Postives = 77/81 (95.06%), Query Frame = 0

Query:   12 MAGFLVVMLINVLLLVLAVFLMFFADPDSHGYGGQLYRLVCEGGPRMLSAGMRLVFGEACAGRVSECGNWVMNKPNRLMQG 92
            MAGFL+VM INVLLLVLA+FLMF ADP+SHGYGGQLYRLVCEGGPRMLS GMRLVFGEACAGRVSECGN VMNKPNRLMQG
Sbjct:    1 MAGFLLVMSINVLLLVLAIFLMFIADPESHGYGGQLYRLVCEGGPRMLSTGMRLVFGEACAGRVSECGNLVMNKPNRLMQG 81

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig7708.15882.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig7708.15882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LSG7_ECTSI	2.710e-44	95.06	Palmitoyltransferase n=1 Tax=Ectocarpus siliculosu...	[more]
A0A6H5L085_9PHAE	3.720e-41	91.36	Palmitoyltransferase (Fragment) n=1 Tax=Ectocarpus...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..36
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 37..92
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	TMHMM	TMhelix		coord: 13..35

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig7708	contig	E_fasciculatus_S2_contig7708:5169..6438 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig7708.15882.1	mRNA_E_fasciculatus_S2_contig7708.15882.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig7708 5169..6438 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig7708.15882.1 ID=prot_E_fasciculatus_S2_contig7708.15882.1|Name=mRNA_E_fasciculatus_S2_contig7708.15882.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=92bp
PGSVQDWPIRNMAGFLVVMLINVLLLVLAVFLMFFADPDSHGYGGQLYRL
VCEGGPRMLSAGMRLVFGEACAGRVSECGNWVMNKPNRLMQG